FFCP PHASE1:Hg19::chr6:74063979..74064006,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=340168|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19201|TSSclassifier=S|UniProt=A6NC42|association_with_transcript=0bp_to_NM_001025290_5end|coexpression_cluster_id=C45|description=CAGE_peak_1_at_DPPA5_5end|id=chr6:74063979..74064006,-|ontology_enrichment_celltype=CL:0002322!4.33e-40!5;CL:0000039!2.49e-29!7;CL:0000586!2.49e-29!7;CL:0000540!2.34e-19!6;CL:0000031!2.34e-19!6;CL:0000404!2.34e-19!6;CL:0000047!1.11e-14!8|ontology_enrichment_celltype_v019=CL:0000039;7.42e-65;7!CL:0000586;7.42e-65;7!CL:0002322;2.02e-23;5!CL:0002321;1.71e-08;15|ontology_enrichment_celltype_v019_2=CL:0000039,9.49e-65,7;CL:0000586,9.49e-65,7;CL:0002322,2.02e-23,5|ontology_enrichment_development_v019=UBERON:0009117;1.18e-45;10!UBERON:0005564;1.18e-45;10|ontology_enrichment_disease=DOID:3095!2.75e-14!22;DOID:2994!2.75e-14!22|ontology_enrichment_disease_v019=DOID:3095;3.85e-21;22!DOID:2994;3.85e-21;22|ontology_enrichment_disease_v019_2=DOID:3095,4.16e-21,22;DOID:2994,4.16e-21,22|ontology_enrichment_uberon=UBERON:0000473!5.90e-56!8;UBERON:0003135!1.13e-40!11;UBERON:0000991!3.18e-21!21;UBERON:0009196!3.18e-21!21;UBERON:0009117!3.18e-21!21;UBERON:0005564!3.18e-21!21;UBERON:0004176!3.00e-20!22;UBERON:0003101!3.00e-20!22;UBERON:0000079!3.00e-20!22;UBERON:0002323!1.59e-09!46;UBERON:0003133!4.12e-09!48;UBERON:0004458!6.43e-09!49;UBERON:0005156!2.42e-07!59;UBERON:0000990!2.42e-07!59;UBERON:0003886!7.51e-07!63|ontology_enrichment_uberon_v019=UBERON:0000473;7.38e-57;8!UBERON:0003135;1.41e-41;11!UBERON:0000991;4.06e-22;21!UBERON:0003101;3.85e-21;22!UBERON:0000079;3.85e-21;22!UBERON:0000922;9.44e-18;49!UBERON:0002323;5.46e-10;45!UBERON:0003133;2.85e-08;44|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.15e-57,8;UBERON:0003135,1.65e-41,11;UBERON:0000991,4.41e-22,21;UBERON:0009196,4.41e-22,21;UBERON:0009117,4.41e-22,21;UBERON:0005564,4.41e-22,21;UBERON:0004176,4.16e-21,22;UBERON:0003101,4.16e-21,22;UBERON:0000079,4.16e-21,22;UBERON:0002323,2.22e-10,46;UBERON:0003133,5.74e-10,48;UBERON:0004458,8.97e-10,49;UBERON:0003886,6.55e-09,54;UBERON:0005156,3.43e-08,59;UBERON:0000990,3.43e-08,59;UBERON:0002553,6.16e-08,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.265059536642971,0.813357600086629,1.14027160516907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,131.973545686124,1.06886962106224,154.107746519935,83.2349030450685,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@DPPA5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=340168 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19201 | |||
|TSSclassifier=S | |||
|UniProt=A6NC42 | |||
|association_with_transcript=0bp_to_NM_001025290_5end | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_1_at_DPPA5_5end | |||
|id=chr6:74063979..74064006,- | |||
|ontology_enrichment_celltype=CL:0002322!4.33e-40!5;CL:0000039!2.49e-29!7;CL:0000586!2.49e-29!7;CL:0000540!2.34e-19!6;CL:0000031!2.34e-19!6;CL:0000404!2.34e-19!6;CL:0000047!1.11e-14!8 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.42e-65;7!CL:0000586;7.42e-65;7!CL:0002322;2.02e-23;5!CL:0002321;1.71e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.49e-65,7;CL:0000586,9.49e-65,7;CL:0002322,2.02e-23,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.18e-45;10!UBERON:0005564;1.18e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!2.75e-14!22;DOID:2994!2.75e-14!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.85e-21;22!DOID:2994;3.85e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.16e-21,22;DOID:2994,4.16e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.90e-56!8;UBERON:0003135!1.13e-40!11;UBERON:0000991!3.18e-21!21;UBERON:0009196!3.18e-21!21;UBERON:0009117!3.18e-21!21;UBERON:0005564!3.18e-21!21;UBERON:0004176!3.00e-20!22;UBERON:0003101!3.00e-20!22;UBERON:0000079!3.00e-20!22;UBERON:0002323!1.59e-09!46;UBERON:0003133!4.12e-09!48;UBERON:0004458!6.43e-09!49;UBERON:0005156!2.42e-07!59;UBERON:0000990!2.42e-07!59;UBERON:0003886!7.51e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.38e-57;8!UBERON:0003135;1.41e-41;11!UBERON:0000991;4.06e-22;21!UBERON:0003101;3.85e-21;22!UBERON:0000079;3.85e-21;22!UBERON:0000922;9.44e-18;49!UBERON:0002323;5.46e-10;45!UBERON:0003133;2.85e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.15e-57,8;UBERON:0003135,1.65e-41,11;UBERON:0000991,4.41e-22,21;UBERON:0009196,4.41e-22,21;UBERON:0009117,4.41e-22,21;UBERON:0005564,4.41e-22,21;UBERON:0004176,4.16e-21,22;UBERON:0003101,4.16e-21,22;UBERON:0000079,4.16e-21,22;UBERON:0002323,2.22e-10,46;UBERON:0003133,5.74e-10,48;UBERON:0004458,8.97e-10,49;UBERON:0003886,6.55e-09,54;UBERON:0005156,3.43e-08,59;UBERON:0000990,3.43e-08,59;UBERON:0002553,6.16e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.265059536642971,0.813357600086629,1.14027160516907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,131.973545686124,1.06886962106224,154.107746519935,83.2349030450685,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@DPPA5 | |||
}} |
Revision as of 21:47, 13 September 2013
Short description: | p1@DPPA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DPPA5_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_NM_001025290_5end |
EntrezGene: | DPPA5 |
HGNC: | 19201 |
UniProt: | A6NC42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.49e-65 | 7 |
germ cell | 9.49e-65 | 7 |
embryonic stem cell | 2.02e-23 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 9.15e-57 | 8 |
male reproductive organ | 1.65e-41 | 11 |
gonad | 4.41e-22 | 21 |
indifferent external genitalia | 4.41e-22 | 21 |
indifferent gonad | 4.41e-22 | 21 |
gonad primordium | 4.41e-22 | 21 |
external genitalia | 4.16e-21 | 22 |
male organism | 4.16e-21 | 22 |
male reproductive system | 4.16e-21 | 22 |
body cavity | 2.22e-10 | 46 |
reproductive organ | 5.74e-10 | 48 |
body cavity or lining | 8.97e-10 | 49 |
body cavity precursor | 6.55e-09 | 54 |
reproductive structure | 3.43e-08 | 59 |
reproductive system | 3.43e-08 | 59 |
anatomical cavity | 6.16e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.16e-21 | 22 |
germ cell cancer | 4.16e-21 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.