FFCP PHASE1:Hg19::chr6:72596142..72596154,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22999|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17282|TSSclassifier=W|UniProt=|association_with_transcript=-251bp_to_ENST00000370419,ENST00000491071_5end|coexpression_cluster_id=C3|description=CAGE_peak_8_at_RIMS1_5end|id=chr6:72596142..72596154,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000228;1.79e-07;1!CL:0002372;1.79e-07;1|ontology_enrichment_celltype_v019_2=CL:0000228,2.17e-07,1;CL:0002372,2.17e-07,1|ontology_enrichment_development_v019=UBERON:0006215;1.32e-19;3!UBERON:0006222;1.79e-07;1!UBERON:0006601;6.35e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.43e-63!57;UBERON:0005068!1.43e-63!57;UBERON:0006241!1.43e-63!57;UBERON:0007135!1.43e-63!57;UBERON:0005743!2.13e-54!86;UBERON:0001017!4.24e-53!82;UBERON:0002616!1.68e-52!59;UBERON:0000073!4.91e-52!94;UBERON:0001016!4.91e-52!94;UBERON:0002780!1.70e-50!41;UBERON:0001890!1.70e-50!41;UBERON:0006240!1.70e-50!41;UBERON:0003075!8.49e-50!86;UBERON:0007284!8.49e-50!86;UBERON:0003080!4.55e-49!42;UBERON:0002020!5.11e-48!34;UBERON:0003528!5.11e-48!34;UBERON:0001893!5.80e-48!34;UBERON:0000955!2.59e-47!69;UBERON:0006238!2.59e-47!69;UBERON:0002346!6.11e-47!90;UBERON:0002791!7.29e-46!33;UBERON:0001869!6.84e-45!32;UBERON:0003056!6.83e-37!61;UBERON:0002619!1.58e-36!22;UBERON:0007023!7.14e-34!115;UBERON:0001950!2.62e-32!20;UBERON:0000956!1.46e-31!25;UBERON:0000203!1.46e-31!25;UBERON:0000033!1.11e-27!123;UBERON:0004121!7.68e-26!169;UBERON:0000153!9.14e-26!129;UBERON:0007811!9.14e-26!129;UBERON:0000924!6.87e-25!173;UBERON:0006601!6.87e-25!173;UBERON:0002308!3.46e-18!9;UBERON:0000125!3.46e-18!9;UBERON:0003076!4.77e-15!15;UBERON:0003057!4.77e-15!15;UBERON:0002420!1.00e-14!9;UBERON:0007245!1.00e-14!9;UBERON:0010009!1.00e-14!9;UBERON:0010011!1.00e-14!9;UBERON:0000454!1.00e-14!9;UBERON:0009663!1.24e-14!7;UBERON:0000200!5.24e-14!6;UBERON:0000025!1.67e-13!194;UBERON:0001872!1.79e-11!5;UBERON:0001871!1.54e-10!7;UBERON:0004733!1.69e-10!12;UBERON:0002028!1.69e-10!12;UBERON:0007277!1.69e-10!12;UBERON:0000064!2.07e-10!219;UBERON:0004732!1.44e-09!13;UBERON:0000369!1.74e-09!4;UBERON:0002435!1.74e-09!4;UBERON:0000204!1.74e-09!4;UBERON:0010082!1.74e-09!4;UBERON:0000475!3.61e-09!365;UBERON:0002298!9.90e-09!8;UBERON:0000483!1.21e-08!309;UBERON:0002680!1.49e-08!9;UBERON:0001895!1.49e-08!9;UBERON:0010092!1.49e-08!9;UBERON:0004111!1.78e-08!241;UBERON:0000119!1.99e-08!312;UBERON:0000349!4.02e-08!5;UBERON:0002771!7.64e-08!3;UBERON:0002021!9.10e-08!5;UBERON:0005383!2.18e-07!3;UBERON:0005382!2.18e-07!3;UBERON:0000477!3.24e-07!286;UBERON:0000988!4.79e-07!3;UBERON:0006331!9.08e-07!3|ontology_enrichment_uberon_v019=UBERON:0002619;7.50e-76;22!UBERON:0001869;1.17e-69;32!UBERON:0000956;1.04e-66;25!UBERON:0000203;1.04e-66;25!UBERON:0001950;1.40e-64;20!UBERON:0002791;1.16e-63;32!UBERON:0001893;1.05e-60;34!UBERON:0003528;1.45e-58;34!UBERON:0002020;1.45e-58;34!UBERON:0002780;2.74e-51;41!UBERON:0001890;2.74e-51;41!UBERON:0000073;2.44e-39;53!UBERON:0002616;2.44e-39;53!UBERON:0000200;1.38e-36;6!UBERON:0000955;1.41e-27;68!UBERON:0001017;6.79e-23;75!UBERON:0001871;1.11e-22;6!UBERON:0001016;5.27e-21;83!UBERON:0000349;1.52e-20;5!UBERON:0001870;2.27e-19;3!UBERON:0001954;8.91e-14;2!UBERON:0003022;8.91e-14;2!UBERON:0002421;8.91e-14;2!UBERON:0002600;8.91e-14;2!UBERON:0002771;2.88e-13;2!UBERON:0002702;2.88e-13;2!UBERON:0002021;3.78e-12;5!UBERON:0001872;7.57e-12;5!UBERON:0002420;2.84e-11;9!UBERON:0007245;2.84e-11;9!UBERON:0010009;2.84e-11;9!UBERON:0010011;2.84e-11;9!UBERON:0000454;2.84e-11;9!UBERON:0002037;4.53e-10;6!UBERON:0011216;1.68e-09;132!UBERON:0007023;2.59e-09;114!UBERON:0009663;1.88e-08;7!UBERON:0003112;5.39e-08;1!UBERON:0011158;5.39e-08;1!UBERON:0003128;5.39e-08;1!UBERON:0001703;5.39e-08;1!UBERON:0002241;5.39e-08;1!UBERON:0002022;7.75e-08;1!UBERON:0007190;7.75e-08;1!UBERON:0002581;1.79e-07;1!UBERON:0002902;1.79e-07;1!UBERON:0001882;1.79e-07;1!UBERON:0009899;1.79e-07;1!UBERON:0005403;1.79e-07;1!UBERON:0000369;4.61e-07;4!UBERON:0002435;4.61e-07;4!UBERON:0000204;4.61e-07;4!UBERON:0002680;7.34e-07;9!UBERON:0001895;7.34e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.22e-80,32;UBERON:0002619,1.65e-76,22;UBERON:0001893,2.12e-75,34;UBERON:0002791,1.77e-72,32;UBERON:0001049,9.66e-70,56;UBERON:0005068,9.66e-70,56;UBERON:0006241,9.66e-70,56;UBERON:0007135,9.66e-70,56;UBERON:0002780,2.81e-68,41;UBERON:0001890,2.81e-68,41;UBERON:0003080,2.81e-68,41;UBERON:0006240,2.81e-68,41;UBERON:0000073,3.37e-68,53;UBERON:0002616,3.37e-68,53;UBERON:0003528,4.14e-68,34;UBERON:0002020,4.14e-68,34;UBERON:0000956,2.74e-67,25;UBERON:0000203,2.74e-67,25;UBERON:0001950,4.37e-65,20;UBERON:0000955,7.23e-56,68;UBERON:0006238,7.23e-56,68;UBERON:0001017,3.50e-50,81;UBERON:0003075,2.20e-46,82;UBERON:0007284,2.20e-46,82;UBERON:0003056,7.46e-45,61;UBERON:0001016,8.64e-45,89;UBERON:0002346,4.99e-44,86;UBERON:0000200,6.55e-37,6;UBERON:0010371,1.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-251bp_to_ENST00000370419,ENST00000491071_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_8_at_RIMS1_5end | |||
|id=chr6:72596142..72596154,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.79e-07;1!CL:0002372;1.79e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.17e-07,1;CL:0002372,2.17e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.32e-19;3!UBERON:0006222;1.79e-07;1!UBERON:0006601;6.35e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.43e-63!57;UBERON:0005068!1.43e-63!57;UBERON:0006241!1.43e-63!57;UBERON:0007135!1.43e-63!57;UBERON:0005743!2.13e-54!86;UBERON:0001017!4.24e-53!82;UBERON:0002616!1.68e-52!59;UBERON:0000073!4.91e-52!94;UBERON:0001016!4.91e-52!94;UBERON:0002780!1.70e-50!41;UBERON:0001890!1.70e-50!41;UBERON:0006240!1.70e-50!41;UBERON:0003075!8.49e-50!86;UBERON:0007284!8.49e-50!86;UBERON:0003080!4.55e-49!42;UBERON:0002020!5.11e-48!34;UBERON:0003528!5.11e-48!34;UBERON:0001893!5.80e-48!34;UBERON:0000955!2.59e-47!69;UBERON:0006238!2.59e-47!69;UBERON:0002346!6.11e-47!90;UBERON:0002791!7.29e-46!33;UBERON:0001869!6.84e-45!32;UBERON:0003056!6.83e-37!61;UBERON:0002619!1.58e-36!22;UBERON:0007023!7.14e-34!115;UBERON:0001950!2.62e-32!20;UBERON:0000956!1.46e-31!25;UBERON:0000203!1.46e-31!25;UBERON:0000033!1.11e-27!123;UBERON:0004121!7.68e-26!169;UBERON:0000153!9.14e-26!129;UBERON:0007811!9.14e-26!129;UBERON:0000924!6.87e-25!173;UBERON:0006601!6.87e-25!173;UBERON:0002308!3.46e-18!9;UBERON:0000125!3.46e-18!9;UBERON:0003076!4.77e-15!15;UBERON:0003057!4.77e-15!15;UBERON:0002420!1.00e-14!9;UBERON:0007245!1.00e-14!9;UBERON:0010009!1.00e-14!9;UBERON:0010011!1.00e-14!9;UBERON:0000454!1.00e-14!9;UBERON:0009663!1.24e-14!7;UBERON:0000200!5.24e-14!6;UBERON:0000025!1.67e-13!194;UBERON:0001872!1.79e-11!5;UBERON:0001871!1.54e-10!7;UBERON:0004733!1.69e-10!12;UBERON:0002028!1.69e-10!12;UBERON:0007277!1.69e-10!12;UBERON:0000064!2.07e-10!219;UBERON:0004732!1.44e-09!13;UBERON:0000369!1.74e-09!4;UBERON:0002435!1.74e-09!4;UBERON:0000204!1.74e-09!4;UBERON:0010082!1.74e-09!4;UBERON:0000475!3.61e-09!365;UBERON:0002298!9.90e-09!8;UBERON:0000483!1.21e-08!309;UBERON:0002680!1.49e-08!9;UBERON:0001895!1.49e-08!9;UBERON:0010092!1.49e-08!9;UBERON:0004111!1.78e-08!241;UBERON:0000119!1.99e-08!312;UBERON:0000349!4.02e-08!5;UBERON:0002771!7.64e-08!3;UBERON:0002021!9.10e-08!5;UBERON:0005383!2.18e-07!3;UBERON:0005382!2.18e-07!3;UBERON:0000477!3.24e-07!286;UBERON:0000988!4.79e-07!3;UBERON:0006331!9.08e-07!3 | |||
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|phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0.423863802319124,0,0,0.772921620136887,0,1.5189869901714,0.194874010322397,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81338832821025,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,1.11321717794222,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,1.08536794762867,1.52581736317083,5.86070077635491,1.47773809476774,0.87754158861589,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.617819694732514,0.313265848516366,0.134802265961354,0,1.40558667435203,0,0,0,0,0,5.81538247097931,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15256706249988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,1.77064427945048,0,0,0,0,0,2.42998226632099,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,1.752673029891,0,0.221858103073705,0.683060432355218,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,1.92687675289379,0,0.478901577171454,2.46139637088906,3.78107544332577,1.72893131160545,3.22951291263702,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,2.29627787702542,0.781078098613847,0.620060389503552,1.96589011601111,2.18789923607288,0,0,0,0,0,0,0.606965604236632,0.91064876540519,0,0.230467975111559,0,0.747667062745149,1.24968269769413,0,0,0,0.942693539496011,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,1.2679671827502,0.509781344063451,0,0,0,0,0,0,0,0,0.286679166302903,0,2.99162556840025,3.05445483238264,0.5290268405154,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0.535928260312357,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@RIMS1 | |||
}} |
Revision as of 21:44, 13 September 2013
Short description: | p8@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_RIMS1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -251bp_to_ENST00000370419, ENST00000491071_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.17e-07 | 1 |
myotube | 2.17e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.