FFCP PHASE1:Hg19::chr6:57086966..57086975,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51715|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14263|TSSclassifier=S|UniProt=Q9ULC3|association_with_transcript=102bp_to_ENST00000317483,NM_016277,uc003pdt.2_5end|description=CAGE_peak_6_at_RAB23_5end|id=chr6:57086966..57086975,-|ontology_enrichment_celltype=CL:0000055!1.91e-12!180;CL:0000057!2.97e-07!75|ontology_enrichment_celltype_v019=CL:0002556;1.05e-07;6!CL:0002622;2.50e-07;3!CL:0000214;4.60e-07;3|ontology_enrichment_celltype_v019_2=CL:0002556,1.14e-07,6;CL:0000214,3.38e-07,3;CL:0002622,3.72e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;2.14e-15;3!DOID:127;2.14e-15;3!DOID:0060072;1.14e-11;4|ontology_enrichment_disease_v019_2=DOID:0060084,1.36e-15,3;DOID:127,1.36e-15,3;DOID:0060072,8.17e-12,4|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001434;3.16e-08;36!UBERON:0001758;1.05e-07;6!UBERON:0003672;1.05e-07;6!UBERON:0006915;4.60e-07;3!UBERON:0007616;4.60e-07;3!UBERON:0002217;4.60e-07;3!UBERON:0002018;4.60e-07;3!UBERON:0011137;4.95e-07;11!UBERON:0010323;4.95e-07;11!UBERON:0002367;5.54e-07;11!UBERON:0010147;5.54e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000162,4.52e-08,14;UBERON:0001353,4.52e-08,14;UBERON:0000163,4.52e-08,14;UBERON:0006866,4.52e-08,14;UBERON:0000164,4.52e-08,14;UBERON:0000931,4.52e-08,14;UBERON:0001758,1.14e-07,6;UBERON:0003672,1.14e-07,6;UBERON:0004122,1.63e-07,15;UBERON:0006915,3.38e-07,3;UBERON:0007616,3.38e-07,3;UBERON:0002217,3.38e-07,3;UBERON:0002018,3.38e-07,3;UBERON:0000161,4.90e-07,36;UBERON:0010323,6.37e-07,11;UBERON:0002367,9.04e-07,11;UBERON:0010147,9.04e-07,11;UBERON:0009846,9.04e-07,11;UBERON:0003353,9.04e-07,11;UBERON:0004902,9.04e-07,11;UBERON:0003820,9.04e-07,11;UBERON:0009847,9.04e-07,11|phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0,0.618831764800233,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,1.00267582127178,0.724232594804119,0,0.486634870302636,0,0.443458794925128,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.98788780678127,0.25326102332916,0.794455084879313,0.286836620748814,0,0.560677600142307,0,1.2333377420858,0,0,0,0,0,0,0,0,0.597794722207204,0,0,0,0.408308342509787,0.122834317311768,0.206651562351531,4.75201142912821,1.23633464639278,0,0,0,0.125118519871964,0.554128230968366,1.31693286264251,1.22595118319608,4.5071417671979,0.453728732640084,0,0.427114777637135,0.423863802319124,0.300091096084402,0.412210116953756,0.257640540045629,0.744467425326359,2.86919764810153,0.779496041289589,0.252433774244115,1.10459878370759,0,0.710019185033229,0.806016785821122,0.339121184620975,0.386521706326594,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0.241011029883482,0,0,0,0.539325232640658,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,1.86156681609409,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0.355391948742546,0,0.301439377059586,1.74306691720059,0.199945982364114,0,0,0,0.718874566474748,1.14861935834114,0,2.46128221334885,0.205476322550383,0.895304816199478,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0.902838299183157,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0,0.640695746278505,0,1.28683136914886,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0,0,0,0.368323955743585,0.459257792658427,1.0925470080403,2.22911505431021,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0.27470839445503,0.41254749960294,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0.842516912477962,0,1.21856744815642,0,0.682499557039929,1.1312434556297,0,1.65409603063837,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.430234056612155,0.589494246078727,0.35667105148125,0,1.68886108238131,1.31717957183961,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14263 | |||
|TSSclassifier=S | |||
|UniProt=Q9ULC3 | |||
|association_with_transcript=102bp_to_ENST00000317483,NM_016277,uc003pdt.2_5end | |||
|description=CAGE_peak_6_at_RAB23_5end | |||
|id=chr6:57086966..57086975,- | |||
|ontology_enrichment_celltype=CL:0000055!1.91e-12!180;CL:0000057!2.97e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002556;1.05e-07;6!CL:0002622;2.50e-07;3!CL:0000214;4.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,1.14e-07,6;CL:0000214,3.38e-07,3;CL:0002622,3.72e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.14e-15;3!DOID:127;2.14e-15;3!DOID:0060072;1.14e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.36e-15,3;DOID:127,1.36e-15,3;DOID:0060072,8.17e-12,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001434;3.16e-08;36!UBERON:0001758;1.05e-07;6!UBERON:0003672;1.05e-07;6!UBERON:0006915;4.60e-07;3!UBERON:0007616;4.60e-07;3!UBERON:0002217;4.60e-07;3!UBERON:0002018;4.60e-07;3!UBERON:0011137;4.95e-07;11!UBERON:0010323;4.95e-07;11!UBERON:0002367;5.54e-07;11!UBERON:0010147;5.54e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000162,4.52e-08,14;UBERON:0001353,4.52e-08,14;UBERON:0000163,4.52e-08,14;UBERON:0006866,4.52e-08,14;UBERON:0000164,4.52e-08,14;UBERON:0000931,4.52e-08,14;UBERON:0001758,1.14e-07,6;UBERON:0003672,1.14e-07,6;UBERON:0004122,1.63e-07,15;UBERON:0006915,3.38e-07,3;UBERON:0007616,3.38e-07,3;UBERON:0002217,3.38e-07,3;UBERON:0002018,3.38e-07,3;UBERON:0000161,4.90e-07,36;UBERON:0010323,6.37e-07,11;UBERON:0002367,9.04e-07,11;UBERON:0010147,9.04e-07,11;UBERON:0009846,9.04e-07,11;UBERON:0003353,9.04e-07,11;UBERON:0004902,9.04e-07,11;UBERON:0003820,9.04e-07,11;UBERON:0009847,9.04e-07,11 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0,0.618831764800233,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,1.00267582127178,0.724232594804119,0,0.486634870302636,0,0.443458794925128,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.98788780678127,0.25326102332916,0.794455084879313,0.286836620748814,0,0.560677600142307,0,1.2333377420858,0,0,0,0,0,0,0,0,0.597794722207204,0,0,0,0.408308342509787,0.122834317311768,0.206651562351531,4.75201142912821,1.23633464639278,0,0,0,0.125118519871964,0.554128230968366,1.31693286264251,1.22595118319608,4.5071417671979,0.453728732640084,0,0.427114777637135,0.423863802319124,0.300091096084402,0.412210116953756,0.257640540045629,0.744467425326359,2.86919764810153,0.779496041289589,0.252433774244115,1.10459878370759,0,0.710019185033229,0.806016785821122,0.339121184620975,0.386521706326594,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0.241011029883482,0,0,0,0.539325232640658,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,1.86156681609409,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0.355391948742546,0,0.301439377059586,1.74306691720059,0.199945982364114,0,0,0,0.718874566474748,1.14861935834114,0,2.46128221334885,0.205476322550383,0.895304816199478,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0.902838299183157,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0,0.640695746278505,0,1.28683136914886,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0,0,0,0.368323955743585,0.459257792658427,1.0925470080403,2.22911505431021,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0.27470839445503,0.41254749960294,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0.842516912477962,0,1.21856744815642,0,0.682499557039929,1.1312434556297,0,1.65409603063837,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.430234056612155,0.589494246078727,0.35667105148125,0,1.68886108238131,1.31717957183961,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,0.102268682502155,0,3.11039587661807,0,0,0,2.26879832964947,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0.762569244632931,0.139423744278603,0.0769502585037971,0.683652335082007,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,1.99052386215701,0.442287822516696,0,0,0,0.208843899010911,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,1.26373159256976,0.150323419414493,0,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0.174118413160805,0.873633341210151,2.40780445460263,0.0967563312890851,0.365446585430928,0.0821154570532092,0.193978032976839,0,0.90392296312213,0.411125773940253,0.397429223405979,0.189932387867636,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0.577901179803038,0,0.273810757783986,0,0.429765441419957,0,0.558564802544508,0.458320848023367,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0.13480708770837,0,0.0846733320657845,0,0.136203406111576,0,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,2.17199840701485,6.91377192961014,1.95952416065645,0,0,0.851940108927109,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0.467426619694449,0,0.757612021100357,2.0125432140206,2.66943366478961,0,0.302461847526478,0,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0.150257608997218,1.14241563650639,0,0.181848659202559,0,0,1.59238355479446,0,2.0603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| |||
|short_description=p6@RAB23 | |||
}} |
Revision as of 21:32, 13 September 2013
Short description: | p6@RAB23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RAB23_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_ENST00000317483, NM_016277, uc003pdt.2_5end |
EntrezGene: | RAB23 |
HGNC: | 14263 |
UniProt: | Q9ULC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 1.14e-07 | 6 |
synovial cell | 3.38e-07 | 3 |
prostate stromal cell | 3.72e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cloaca | 4.52e-08 | 14 |
anal region | 4.52e-08 | 14 |
embryonic cloaca | 4.52e-08 | 14 |
terminal part of digestive tract | 4.52e-08 | 14 |
primitive urogenital sinus | 4.52e-08 | 14 |
proctodeum | 4.52e-08 | 14 |
periodontium | 1.14e-07 | 6 |
dentition | 1.14e-07 | 6 |
genitourinary system | 1.63e-07 | 15 |
stratified squamous epithelium | 3.38e-07 | 3 |
layer of synovial tissue | 3.38e-07 | 3 |
synovial joint | 3.38e-07 | 3 |
synovial membrane of synovial joint | 3.38e-07 | 3 |
orifice | 4.90e-07 | 36 |
cranial skeletal system | 6.37e-07 | 11 |
prostate gland | 9.04e-07 | 11 |
male accessory sex gland | 9.04e-07 | 11 |
embryonic cloacal epithelium | 9.04e-07 | 11 |
epithelium of hindgut | 9.04e-07 | 11 |
urogenital sinus epithelium | 9.04e-07 | 11 |
prostate bud | 9.04e-07 | 11 |
prostate field | 9.04e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.36e-15 | 3 |
leiomyoma | 1.36e-15 | 3 |
benign neoplasm | 8.17e-12 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.