FFCP PHASE1:Hg19::chr6:31926712..31926758,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7936|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13974|TSSclassifier=S|UniProt=A2ABK1,B4DUN1,E7EWR7,E7ENC7|association_with_transcript=0bp_to_ENST00000441998,ENST00000444811,ENST00000481121,ENST00000491139,ENST00000492539,ENST00000494956_5end|description=CAGE_peak_1_at_RDBP_5end|id=chr6:31926712..31926758,-|ontology_enrichment_celltype=CL:0000066!2.62e-12!254;CL:0002321!2.85e-09!248;CL:0000220!4.13e-09!246;CL:0000548!5.43e-08!679;CL:0000004!5.43e-08!679;CL:0000255!5.43e-08!679;CL:0000012!2.50e-07!682;CL:0000183!2.51e-07!59|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,4.19e-12,253;CL:0002321,1.10e-09,250|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!4.49e-11!239;DOID:162!5.89e-11!235;DOID:0050687!7.62e-11!143;DOID:305!5.06e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,4.49e-11,239;DOID:162,5.89e-11,235;DOID:0050687,7.62e-11,143;DOID:305,5.06e-07,106|ontology_enrichment_uberon=UBERON:0003104!1.54e-08!238;UBERON:0009142!1.54e-08!238;UBERON:0008947!6.05e-07!38;UBERON:0003258!6.05e-07!38|ontology_enrichment_uberon_v019=UBERON:0000072;4.09e-08;37|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.68e-08,78;UBERON:0008947,6.05e-07,38;UBERON:0003258,6.05e-07,38;UBERON:0002100,6.89e-07,199|phase1_expression=41.786027232228,52.8828294010728,30.4461512847298,60.0439790118782,46.0369927260106,48.8509573496206,70.923965887127,58.1182283552684,46.4910418195713,99.5222442831111,184.219508344721,71.8672114308267,83.3503651201913,58.0464195382619,64.2910908912157,57.8199625948527,64.4883144985655,68.6491484964131,61.9674654463944,80.3980509241425,111.588378110606,83.3789559131714,62.9719171688325,59.129751631486,57.6240715740145,20.8608597691907,20.9356503097362,20.3860923602429,54.6776344819977,38.7667692078185,34.8336277461171,123.202444080176,132.53060426243,146.792342036215,41.599886711622,35.1158004243931,40.5168606282089,43.2116418654864,43.5181451010207,42.7511415310228,42.9917710540655,37.2477715921826,34.7727016306152,47.109029364579,48.3681207921676,50.7000687882536,62.9882690014405,55.0964969949247,57.9150913573844,62.7169415262288,37.3994631532487,56.992217403149,55.159308917859,55.511682788209,48.753535173963,44.2369497925121,48.0314824101809,67.1923218490803,60.6046106894387,50.3858572509467,65.8517239573012,48.4881411274473,36.1029220295154,51.573194814456,73.4229373730318,87.3773246024355,85.9494703613893,42.2097757631329,43.2830822288767,45.3924685433694,59.9345507607035,60.3975323019606,70.5711123993172,55.1376297274168,49.1115932919251,66.4617906261552,47.2903537126744,57.5177499582969,45.3246154485766,45.0320135111173,42.3692522434062,51.876619669156,58.0787606722365,46.4217819572812,39.1384071699964,37.5522595858526,34.0336588980611,39.0831659169049,49.5783654588647,46.7486339722328,42.6909726832086,35.8214685516273,38.2273228125229,33.0428321447565,36.4330565937998,41.6146853944622,37.3748563216283,44.0172054279064,42.1483072948994,53.1653055342356,46.6068841286034,49.2385717964123,72.0858895109272,47.5722650899691,48.0207629183985,55.1619397513217,45.7658529762876,67.8883994546078,62.4284868287416,63.96634489083,65.7713042330319,57.9606171470105,40.1856586169184,53.5081656179426,73.1748666634838,49.5161827588364,44.8367977514248,56.6985285046339,54.3992337841931,42.687765519429,53.3888432162263,46.5721501779703,45.0219606042541,47.4830327382892,37.4792179657038,43.5670143760991,54.1944477967891,42.942236306868,35.0346656476395,36.0612765668169,70.7039912310489,60.3630773733273,36.6965552490932,70.842073867375,74.6993486847475,55.7659097999171,56.465302240628,66.1823423611585,48.4018263880027,52.7715965960902,46.9037755601293,49.4446010003865,108.92429119947,123.842003889999,27.9110758543028,35.174206934452,34.8349856559427,34.8196311485799,33.1757048252474,36.4028351302974,68.9705553562467,79.1415827497634,53.8067777491771,68.4022609728052,58.3104216331769,57.7747888074142,70.8492936559788,37.2120133203834,29.1728335403102,28.1165314722323,74.120594348083,78.3080268890068,60.527390271946,44.4872327218501,78.5837689445307,41.0778750106767,59.500283745935,49.3238284516951,81.2578178569181,61.7022678719284,67.2350400224595,63.2546003693104,93.0672633955981,79.3691174899412,53.1759988313991,42.0413298726405,33.2347043841179,35.2809043521041,44.688216156993,53.8250496136615,69.3868472243082,49.5801772318491,18.3614510885862,44.7239431271364,46.7501042904492,46.6180877146389,58.1937683724799,91.8540012788483,54.9401735221364,85.5707732316674,54.100422359752,65.0587122486457,70.090984911401,66.0118791500568,40.6266800797238,60.6801527520134,44.7400632491064,54.6481314349745,53.1623897948897,84.6450066602365,82.6410863088674,45.787422995506,50.1725264686576,26.5981550864816,66.7245983738874,60.0716079766079,56.9402243256002,50.4773215062094,44.3092400151489,49.3317568170891,49.803996772497,58.8178548325428,46.8889008034897,62.34901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82877,66.542043272611,40.1999358476291,38.4116573461387,51.1532149742428,64.9643311818619,54.5510523367906,54.1957254268243,51.2298330731024,45.592266840266,92.4415029279673,102.242666470585,82.1018869395796,84.3110506754937,43.0370275187411,93.8771813922447,53.0766711446797,63.789793723601,49.0568102989731,54.5078949866706,65.4548050280901,117.37412959746,47.0985162102463,91.3605694154516,72.61312775557,37.1207700499214,41.3077569352479,91.711872790497,41.6752146981639,93.0922361051422,88.1425017346104,31.7839648349982,48.605408672091,74.258149118576,36.6537280121429,31.1976177792114,20.9876427442351,54.4589512747256,148.215846120591,76.7107465548448,63.539265777447,53.6713261583313,41.9984978633752,47.1736970957622,40.8628856047397,47.1258745567608,47.0833888058706,65.4711231973482,60.5450073507158,59.7024655730829,43.4012501432671,32.1240781573265,39.9100278186027,81.1831084746175,72.4159168269669,57.0667326111387,53.1499983299835,78.809846146969,122.995535741686,68.8210634750787,43.6487242537198,47.7644119458197,48.8032084500668,53.221261704869,32.0926272909585,104.394764062551,45.5077181688879,60.0288051205911,38.7535811256591,44.1480958400013,32.7330977650895,44.8981005758154,49.899053481902,38.178132978547,47.280214223828,160.24999429816,73.4770153231881,63.3530544489327,42.5400225756375,43.537891079784,45.9372174188004,48.7082580490284,38.1476505840847|short_description=p1@RDBP}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13974 | |||
|TSSclassifier=S | |||
|UniProt=A2ABK1,B4DUN1,E7EWR7,E7ENC7 | |||
|association_with_transcript=0bp_to_ENST00000441998,ENST00000444811,ENST00000481121,ENST00000491139,ENST00000492539,ENST00000494956_5end | |||
|description=CAGE_peak_1_at_RDBP_5end | |||
|id=chr6:31926712..31926758,- | |||
|ontology_enrichment_celltype=CL:0000066!2.62e-12!254;CL:0002321!2.85e-09!248;CL:0000220!4.13e-09!246;CL:0000548!5.43e-08!679;CL:0000004!5.43e-08!679;CL:0000255!5.43e-08!679;CL:0000012!2.50e-07!682;CL:0000183!2.51e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.19e-12,253;CL:0002321,1.10e-09,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.49e-11!239;DOID:162!5.89e-11!235;DOID:0050687!7.62e-11!143;DOID:305!5.06e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.49e-11,239;DOID:162,5.89e-11,235;DOID:0050687,7.62e-11,143;DOID:305,5.06e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.54e-08!238;UBERON:0009142!1.54e-08!238;UBERON:0008947!6.05e-07!38;UBERON:0003258!6.05e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;4.09e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.68e-08,78;UBERON:0008947,6.05e-07,38;UBERON:0003258,6.05e-07,38;UBERON:0002100,6.89e-07,199 | |||
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| |||
|short_description=p1@RDBP | |||
}} |
Revision as of 20:19, 13 September 2013
Short description: | p1@RDBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RDBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000441998, ENST00000444811, ENST00000481121, ENST00000491139, ENST00000492539, ENST00000494956_5end |
EntrezGene: | RDBP |
HGNC: | 13974 |
UniProt: | A2ABK1B4DUN1E7EWR7E7ENC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.19e-12 | 253 |
embryonic cell | 1.10e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.68e-08 | 78 |
respiratory primordium | 6.05e-07 | 38 |
endoderm of foregut | 6.05e-07 | 38 |
trunk | 6.89e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.49e-11 | 239 |
cancer | 5.89e-11 | 235 |
cell type cancer | 7.62e-11 | 143 |
carcinoma | 5.06e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.