FFCP PHASE1:Mm9::chr1:19227682..19227693,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=496|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:19227682..19227693,+|id=chr1:19227682..19227693,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000120,2.00e-23,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.15e-11!21;UBERON:0002113!2.02e-10!14;UBERON:0003918!2.02e-10!14;UBERON:0005095!2.02e-10!14;UBERON:0007687!2.02e-10!14;UBERON:0000970!3.81e-10!9;UBERON:0000019!3.81e-10!9;UBERON:0000047!3.81e-10!9;UBERON:0004088!3.81e-10!9;UBERON:0002104!3.81e-10!9;UBERON:0001456!3.81e-10!9;UBERON:0003072!3.81e-10!9;UBERON:0003071!3.81e-10!9;UBERON:0004128!3.81e-10!9;UBERON:0006554!9.38e-09!16;UBERON:0001008!4.51e-08!17;UBERON:0001444!6.08e-08!11;UBERON:0000020!4.03e-07!12;UBERON:0001032!4.03e-07!12;UBERON:0004456!4.03e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.42e-20,9;UBERON:0000019,2.42e-20,9;UBERON:0000047,2.42e-20,9;UBERON:0010312,2.42e-20,9;UBERON:0004088,2.42e-20,9;UBERON:0002104,2.42e-20,9;UBERON:0001456,2.42e-20,9;UBERON:0003072,2.42e-20,9;UBERON:0004128,2.42e-20,9;UBERON:0003071,2.42e-20,9;UBERON:0001444,1.15e-16,11;UBERON:0000020,2.76e-15,12;UBERON:0001032,2.76e-15,12;UBERON:0004456,2.76e-15,12;UBERON:0000033,4.09e-14,13;UBERON:0005085,4.09e-14,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,4.23192783417626,2.53532561402472,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.548925861614458,0,0,0,0,0.589257170947335,0.854230084794618,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0.758168275301024,0.631325567659422,0.650602214813519,0,0.180062129805349,1.05493372485001,2.17716797284249,4.35586648968489,2.24884138943349,1.03481348295606,0,0.189106080167819,0.175951124163949,0.43839146485515,1.39023624612799,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799739588268102,1.1270773567308,0.610953983535943,1.16371492300575,0.631222379012867,0.505892296994058,0.738050739898011,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0.16488625294148,0.645857706783622,0.301564624640779,0.477489376012546,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.19707462020309,0.170733605754134,0.972426868273176,0.628839487883947,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr1:19227682..19227693,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=496 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:19227682..19227693,+ | |||
|id=chr1:19227682..19227693,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.00e-23,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.15e-11!21;UBERON:0002113!2.02e-10!14;UBERON:0003918!2.02e-10!14;UBERON:0005095!2.02e-10!14;UBERON:0007687!2.02e-10!14;UBERON:0000970!3.81e-10!9;UBERON:0000019!3.81e-10!9;UBERON:0000047!3.81e-10!9;UBERON:0004088!3.81e-10!9;UBERON:0002104!3.81e-10!9;UBERON:0001456!3.81e-10!9;UBERON:0003072!3.81e-10!9;UBERON:0003071!3.81e-10!9;UBERON:0004128!3.81e-10!9;UBERON:0006554!9.38e-09!16;UBERON:0001008!4.51e-08!17;UBERON:0001444!6.08e-08!11;UBERON:0000020!4.03e-07!12;UBERON:0001032!4.03e-07!12;UBERON:0004456!4.03e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.42e-20,9;UBERON:0000019,2.42e-20,9;UBERON:0000047,2.42e-20,9;UBERON:0010312,2.42e-20,9;UBERON:0004088,2.42e-20,9;UBERON:0002104,2.42e-20,9;UBERON:0001456,2.42e-20,9;UBERON:0003072,2.42e-20,9;UBERON:0004128,2.42e-20,9;UBERON:0003071,2.42e-20,9;UBERON:0001444,1.15e-16,11;UBERON:0000020,2.76e-15,12;UBERON:0001032,2.76e-15,12;UBERON:0004456,2.76e-15,12;UBERON:0000033,4.09e-14,13;UBERON:0005085,4.09e-14,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,4.23192783417626,2.53532561402472,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.548925861614458,0,0,0,0,0.589257170947335,0.854230084794618,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0.758168275301024,0.631325567659422,0.650602214813519,0,0.180062129805349,1.05493372485001,2.17716797284249,4.35586648968489,2.24884138943349,1.03481348295606,0,0.189106080167819,0.175951124163949,0.43839146485515,1.39023624612799,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799739588268102,1.1270773567308,0.610953983535943,1.16371492300575,0.631222379012867,0.505892296994058,0.738050739898011,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0.16488625294148,0.645857706783622,0.301564624640779,0.477489376012546,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.19707462020309,0.170733605754134,0.972426868273176,0.628839487883947,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:19227682..19227693,+ | |||
}} |
Revision as of 20:05, 13 September 2013
Short description: | p@chr1:19227682..19227693, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:19227682..19227693, + |
Coexpression cluster: | MCL_coexpression_mm9:496 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 2.00e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 2.42e-20 | 9 |
camera-type eye | 2.42e-20 | 9 |
simple eye | 2.42e-20 | 9 |
immature eye | 2.42e-20 | 9 |
ocular region | 2.42e-20 | 9 |
visual system | 2.42e-20 | 9 |
face | 2.42e-20 | 9 |
optic cup | 2.42e-20 | 9 |
optic vesicle | 2.42e-20 | 9 |
eye primordium | 2.42e-20 | 9 |
subdivision of head | 1.15e-16 | 11 |
sense organ | 2.76e-15 | 12 |
sensory system | 2.76e-15 | 12 |
entire sense organ system | 2.76e-15 | 12 |
head | 4.09e-14 | 13 |
ectodermal placode | 4.09e-14 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.