FFCP PHASE1:Mm9::chr1:186556663..186556683,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=137|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:186556663..186556683,+|id=chr1:186556663..186556683,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,2.83e-10,7;CL:0002320,6.95e-08,46;CL:0000134,6.95e-08,46;CL:0000049,2.44e-07,19;CL:0002092,2.51e-07,3;CL:0002540,2.51e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,8.47e-08,3;DOID:4045,8.47e-08,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.06e-09,16;UBERON:0002204,1.29e-08,32;UBERON:0002048,5.06e-08,14;UBERON:0000117,5.06e-08,14;UBERON:0000171,5.06e-08,14;UBERON:0000170,5.06e-08,14;UBERON:0005597,5.06e-08,14;UBERON:0000118,5.06e-08,14;UBERON:0002384,6.95e-08,46|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.822686601634433,0,0.340173160604279,1.29078236561151,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,25.1118978442145,18.7520482685712,4.71171369576418,34.7056577938298,26.6387739133794,19.4204141212461,0.125896817975577,0.101376931219515,0,0,0,0.439372365468944,0,0,0,0.838913030288682,0,0.336093799142464,0.771778308107841,0,0.515672092277442,0,0,0,0,0,2.6996991518442,4.94433181283487,2.8419204597844,1.49800055259202,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,36.8127900651131,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.852151612890289,0.779358013808606,0.35333957451034,0,0,2.54805239706646,0,0,0,0,0.22836775943812,0.517875767294343,0,0.520455980298408,0.913396434936424,0.230615497256059,0.60289056221049,0.23517741427141,0,0.247194967734374,0.289198713839823,0.884610551949874,0.161766849947409,0.883366073841574,0.969750506270444,0,0.292780797011547,0,0.255457055208591,1.67741174308288,7.7987355029143,1.90605340609597,0,0,0,0,0,0,0.324482526135515,0.203678727700633,0.373220911830279,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0,0,0.187403449119458,0.258703370739016,0.431135985865684,0.378212160335639,0.703804496655795,0,0,1.39300866608867,0.411564272815887,0,2.1066395619397,4.88961023517959,3.40996199274711,0,0,0,0.23674473558521,0,0.154267112887378,0.697601834251224,0.268273401399619,0.350296027101508,0.329119699826961,0.32833492815819,0.891756905004413,0.584799949701329,0.439100230582101,0.805238512562231,0.210289948564127,0.102904612379284,0,0.264450566663544,1.70630600428187,2.55460339046482,1.15980715189884,0.80673409849337,1.55664630691409,1.33157938278791,0,0.988193728344065,0.502670417600539,0.795825888164603,0.19496408711912,0.898819408654221,0.216138049874694,0.995706366271836,1.13800740571849,0.342745537829186,0,0.814605311381257,0.193952487167626,0.350679099451593,0.632365371242573,0.147610147979602,0,0.863780147452604,0,0.500535317148282,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,1.29327233116623,0.947457058852424,0,0.848725428875941,0.938760993154008,2.01007508930179,0.714130922658041,0.195133647857799,2.20689201748667,3.5434350343804,3.50800491046472,1.96635977658886,1.38147985492716,1.44649058581512,6.03165135757089,1.08781136763742,0,0,0.321101179975584,0,0,1.76729649043061,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.35613120733451,0,0.494910368917606,0,0,0,0.377210159511796,0.885905678642318,0.922305443831782,0.516856586336442,0.363533729477506,0,0.632073515871632,0,0,0,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0.658196082408484,0,0,0.847328283455281,0,0.65954501176592,0.484393280087717,0.241251699712623,0.119372344003136,0.328281799490123,0.874442509889552,0.556275906031529,0.170870880797853,0,0.185194527369712,0.376736914009382,0.27338845544205,0,2.71965487990169,3.49878630809145,2.3493995546752,0,1.10717597753397,0.609958401380546,0.108005340821801,0.418176592028937,0,0.134864346384821,0.165306911450672,0,0.777689839750757,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0.25984164595559,0,0.39736270956253,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,1.59609949360412,0.682934423016537,0.729320151204882,0.838452650511929,0.183843508450014,0.44449345560323,0,0.320919209591815,0,0,0.377252682772152,0.468207537349412,0.128050304809739,0.34461281373368,0.952587382566147,0,0.192909220463705,0,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.543216455383447,1.12228454331548,0.593175090620871,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0.441182838239031,1.39120701372253|short_description=p@chr1:186556663..186556683,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=137 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:186556663..186556683,+ | |||
|id=chr1:186556663..186556683,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.83e-10,7;CL:0002320,6.95e-08,46;CL:0000134,6.95e-08,46;CL:0000049,2.44e-07,19;CL:0002092,2.51e-07,3;CL:0002540,2.51e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.47e-08,3;DOID:4045,8.47e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.06e-09,16;UBERON:0002204,1.29e-08,32;UBERON:0002048,5.06e-08,14;UBERON:0000117,5.06e-08,14;UBERON:0000171,5.06e-08,14;UBERON:0000170,5.06e-08,14;UBERON:0005597,5.06e-08,14;UBERON:0000118,5.06e-08,14;UBERON:0002384,6.95e-08,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.822686601634433,0,0.340173160604279,1.29078236561151,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,25.1118978442145,18.7520482685712,4.71171369576418,34.7056577938298,26.6387739133794,19.4204141212461,0.125896817975577,0.101376931219515,0,0,0,0.439372365468944,0,0,0,0.838913030288682,0,0.336093799142464,0.771778308107841,0,0.515672092277442,0,0,0,0,0,2.6996991518442,4.94433181283487,2.8419204597844,1.49800055259202,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,36.8127900651131,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.852151612890289,0.779358013808606,0.35333957451034,0,0,2.54805239706646,0,0,0,0,0.22836775943812,0.517875767294343,0,0.520455980298408,0.913396434936424,0.230615497256059,0.60289056221049,0.23517741427141,0,0.247194967734374,0.289198713839823,0.884610551949874,0.161766849947409,0.883366073841574,0.969750506270444,0,0.292780797011547,0,0.255457055208591,1.67741174308288,7.7987355029143,1.90605340609597,0,0,0,0,0,0,0.324482526135515,0.203678727700633,0.373220911830279,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0,0,0.187403449119458,0.258703370739016,0.431135985865684,0.378212160335639,0.703804496655795,0,0,1.39300866608867,0.411564272815887,0,2.1066395619397,4.88961023517959,3.40996199274711,0,0,0,0.23674473558521,0,0.154267112887378,0.697601834251224,0.268273401399619,0.350296027101508,0.329119699826961,0.32833492815819,0.891756905004413,0.584799949701329,0.439100230582101,0.805238512562231,0.210289948564127,0.102904612379284,0,0.264450566663544,1.70630600428187,2.55460339046482,1.15980715189884,0.80673409849337,1.55664630691409,1.33157938278791,0,0.988193728344065,0.502670417600539,0.795825888164603,0.19496408711912,0.898819408654221,0.216138049874694,0.995706366271836,1.13800740571849,0.342745537829186,0,0.814605311381257,0.193952487167626,0.350679099451593,0.632365371242573,0.147610147979602,0,0.863780147452604,0,0.500535317148282,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,1.29327233116623,0.947457058852424,0,0.848725428875941,0.938760993154008,2.01007508930179,0.714130922658041,0.195133647857799,2.20689201748667,3.5434350343804,3.50800491046472,1.96635977658886,1.38147985492716,1.44649058581512,6.03165135757089,1.08781136763742,0,0,0.321101179975584,0,0,1.76729649043061,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.35613120733451,0,0.494910368917606,0,0,0,0.377210159511796,0.885905678642318,0.922305443831782,0.516856586336442,0.363533729477506,0,0.632073515871632,0,0,0,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0.658196082408484,0,0,0.847328283455281,0,0.65954501176592,0.484393280087717,0.241251699712623,0.119372344003136,0.328281799490123,0.874442509889552,0.556275906031529,0.170870880797853,0,0.185194527369712,0.376736914009382,0.27338845544205,0,2.71965487990169,3.49878630809145,2.3493995546752,0,1.10717597753397,0.609958401380546,0.108005340821801,0.418176592028937,0,0.134864346384821,0.165306911450672,0,0.777689839750757,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0.25984164595559,0,0.39736270956253,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,1.59609949360412,0.682934423016537,0.729320151204882,0.838452650511929,0.183843508450014,0.44449345560323,0,0.320919209591815,0,0,0.377252682772152,0.468207537349412,0.128050304809739,0.34461281373368,0.952587382566147,0,0.192909220463705,0,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.543216455383447,1.12228454331548,0.593175090620871,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0.441182838239031,1.39120701372253 | |||
|short_description=p@chr1:186556663..186556683,+ | |||
}} |
Revision as of 20:00, 13 September 2013
Short description: | p@chr1:186556663..186556683, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:186556663..186556683, + |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.83e-10 | 7 |
connective tissue cell | 6.95e-08 | 46 |
mesenchymal cell | 6.95e-08 | 46 |
common myeloid progenitor | 2.44e-07 | 19 |
bone marrow cell | 2.51e-07 | 3 |
mesenchymal stem cell of the bone marrow | 2.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.06e-09 | 16 |
musculoskeletal system | 1.29e-08 | 32 |
lung | 5.06e-08 | 14 |
respiratory tube | 5.06e-08 | 14 |
respiration organ | 5.06e-08 | 14 |
pair of lungs | 5.06e-08 | 14 |
lung primordium | 5.06e-08 | 14 |
lung bud | 5.06e-08 | 14 |
connective tissue | 6.95e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.47e-08 | 3 |
muscle cancer | 8.47e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.