FFCP PHASE1:Mm9::chr1:174361141..174361152,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:174361141..174361152,+|id=chr1:174361141..174361152,+|ontology_enrichment_celltype=CL:0000473!4.44e-10!3;CL:0000627!4.44e-10!3;CL:0000682!4.44e-10!3;CL:0000239!3.15e-08!6;CL:0000677!3.15e-08!6;CL:0000212!3.15e-08!6;CL:0000584!3.15e-08!6;CL:0000075!4.80e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,2.38e-23,3;CL:0000239,1.29e-19,6;CL:0000677,1.29e-19,6;CL:0000584,1.29e-19,6;CL:0000075,7.19e-17,7;CL:0000066,4.47e-14,25;CL:0002563,3.36e-13,9;CL:0002251,3.36e-13,9;CL:0000473,2.27e-10,7;CL:0002076,4.95e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.00e-09!15;UBERON:0001962!2.81e-07!2;UBERON:0001961!2.81e-07!2;UBERON:0001744!2.81e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.03e-23,15;UBERON:0001962,3.44e-16,2;UBERON:0001961,3.44e-16,2;UBERON:0001744,3.44e-16,2;UBERON:0004923,1.64e-14,24;UBERON:0001242,7.23e-14,13;UBERON:0001262,7.23e-14,13;UBERON:0004786,7.23e-14,13;UBERON:0003350,3.36e-13,9;UBERON:0004808,3.36e-13,9;UBERON:0001277,3.36e-13,9;UBERON:0002465,4.11e-11,3;UBERON:0000485,7.41e-11,11;UBERON:0003199,5.23e-09,1;UBERON:0002367,1.24e-08,1;UBERON:0009846,1.24e-08,1;UBERON:0003353,1.24e-08,1;UBERON:0004902,1.24e-08,1;UBERON:0003820,1.24e-08,1;UBERON:0009847,1.24e-08,1|phase1_expression=0,2.44282785347553,1.81999695755814,0,0,1.6787927191189,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,4.5881856213434,2.29692785646008,7.32295393470427,4.30942465371778,0,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0.495920734352016,1.30877970992015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.384847366561318,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr1:174361141..174361152,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:174361141..174361152,+ | |||
|id=chr1:174361141..174361152,+ | |||
|ontology_enrichment_celltype=CL:0000473!4.44e-10!3;CL:0000627!4.44e-10!3;CL:0000682!4.44e-10!3;CL:0000239!3.15e-08!6;CL:0000677!3.15e-08!6;CL:0000212!3.15e-08!6;CL:0000584!3.15e-08!6;CL:0000075!4.80e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.38e-23,3;CL:0000239,1.29e-19,6;CL:0000677,1.29e-19,6;CL:0000584,1.29e-19,6;CL:0000075,7.19e-17,7;CL:0000066,4.47e-14,25;CL:0002563,3.36e-13,9;CL:0002251,3.36e-13,9;CL:0000473,2.27e-10,7;CL:0002076,4.95e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.00e-09!15;UBERON:0001962!2.81e-07!2;UBERON:0001961!2.81e-07!2;UBERON:0001744!2.81e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.03e-23,15;UBERON:0001962,3.44e-16,2;UBERON:0001961,3.44e-16,2;UBERON:0001744,3.44e-16,2;UBERON:0004923,1.64e-14,24;UBERON:0001242,7.23e-14,13;UBERON:0001262,7.23e-14,13;UBERON:0004786,7.23e-14,13;UBERON:0003350,3.36e-13,9;UBERON:0004808,3.36e-13,9;UBERON:0001277,3.36e-13,9;UBERON:0002465,4.11e-11,3;UBERON:0000485,7.41e-11,11;UBERON:0003199,5.23e-09,1;UBERON:0002367,1.24e-08,1;UBERON:0009846,1.24e-08,1;UBERON:0003353,1.24e-08,1;UBERON:0004902,1.24e-08,1;UBERON:0003820,1.24e-08,1;UBERON:0009847,1.24e-08,1 | |||
|phase1_expression=0,2.44282785347553,1.81999695755814,0,0,1.6787927191189,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,4.5881856213434,2.29692785646008,7.32295393470427,4.30942465371778,0,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0.495920734352016,1.30877970992015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.384847366561318,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:174361141..174361152,+ | |||
}} |
Revision as of 19:46, 13 September 2013
Short description: | p@chr1:174361141..174361152, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174361141..174361152, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.38e-23 | 3 |
brush border epithelial cell | 1.29e-19 | 6 |
gut absorptive cell | 1.29e-19 | 6 |
enterocyte | 1.29e-19 | 6 |
columnar/cuboidal epithelial cell | 7.19e-17 | 7 |
epithelial cell | 4.47e-14 | 25 |
intestinal epithelial cell | 3.36e-13 | 9 |
epithelial cell of alimentary canal | 3.36e-13 | 9 |
defensive cell | 2.27e-10 | 7 |
endo-epithelial cell | 4.95e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.03e-23 | 15 |
gut-associated lymphoid tissue | 3.44e-16 | 2 |
mucosa-associated lymphoid tissue | 3.44e-16 | 2 |
lymphoid tissue | 3.44e-16 | 2 |
organ component layer | 1.64e-14 | 24 |
intestinal mucosa | 7.23e-14 | 13 |
wall of intestine | 7.23e-14 | 13 |
gastrointestinal system mucosa | 7.23e-14 | 13 |
epithelium of mucosa | 3.36e-13 | 9 |
gastrointestinal system epithelium | 3.36e-13 | 9 |
intestinal epithelium | 3.36e-13 | 9 |
lymphoid system | 4.11e-11 | 3 |
simple columnar epithelium | 7.41e-11 | 11 |
egg chamber | 5.23e-09 | 1 |
prostate gland | 1.24e-08 | 1 |
embryonic cloacal epithelium | 1.24e-08 | 1 |
epithelium of hindgut | 1.24e-08 | 1 |
urogenital sinus epithelium | 1.24e-08 | 1 |
prostate bud | 1.24e-08 | 1 |
prostate field | 1.24e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.