FFCP PHASE1:Hg19::chr6:25042412..25042446,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9750|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13872|TSSclassifier=S|UniProt=|association_with_transcript=-14bp_to_uc011dju.1_5end|coexpression_cluster_id=C4583|description=CAGE_peak_4_at_FAM65B_5end|id=chr6:25042412..25042446,-|ontology_enrichment_celltype=CL:0000037!2.86e-44!172;CL:0000566!2.86e-44!172;CL:0000542!7.32e-42!53;CL:0000051!7.32e-42!53;CL:0000838!4.82e-41!52;CL:0000988!7.53e-40!182;CL:0000738!2.66e-39!140;CL:0002032!1.70e-38!165;CL:0000837!1.70e-38!165;CL:0002031!8.52e-30!124;CL:0002087!2.82e-29!119;CL:0000084!2.05e-20!25;CL:0000827!2.05e-20!25;CL:0000791!1.18e-18!18;CL:0000789!1.18e-18!18;CL:0002420!1.18e-18!18;CL:0002419!1.18e-18!18;CL:0000790!1.18e-18!18;CL:0000945!4.20e-18!24;CL:0000826!4.20e-18!24;CL:0000236!3.82e-12!14;CL:0000625!6.30e-12!11;CL:0000763!1.72e-08!112;CL:0000049!1.72e-08!112;CL:0000624!1.76e-07!6|ontology_enrichment_celltype_v019=CL:0000542;6.00e-32;53!CL:0000084;3.51e-27;25!CL:0000945;1.88e-24;24!CL:0000791;8.78e-24;18!CL:0000789;8.78e-24;18!CL:0002419;8.78e-24;18!CL:0000625;1.63e-16;11!CL:0000236;6.30e-14;13!CL:0002087;5.62e-10;104!CL:0000988;1.19e-08;177!CL:0000624;1.00e-07;6!CL:0000738;1.36e-07;136|ontology_enrichment_celltype_v019_2=CL:0000542,2.24e-57,53;CL:0000051,2.24e-57,53;CL:0000838,3.52e-56,52;CL:0000037,8.27e-47,168;CL:0000988,3.42e-43,177;CL:0000738,1.00e-39,136;CL:0002032,2.19e-39,161;CL:0000837,2.19e-39,161;CL:0002031,1.95e-28,120;CL:0002087,2.18e-28,115;CL:0000084,2.92e-27,25;CL:0000827,2.92e-27,25;CL:0000945,1.61e-24,24;CL:0000826,1.61e-24,24;CL:0000791,6.10e-24,18;CL:0000789,6.10e-24,18;CL:0002420,6.10e-24,18;CL:0002419,6.10e-24,18;CL:0000790,6.10e-24,18;CL:0000625,1.12e-16,11;CL:0000236,2.72e-15,14;CL:0000134,8.61e-11,354;CL:0002320,3.49e-10,361;CL:0000219,5.89e-09,386;CL:0000624,1.03e-07,6;CL:0000034,8.35e-07,441|ontology_enrichment_development_v019=CL:0000051;6.00e-32;53!CL:0000790;8.78e-24;18|ontology_enrichment_disease=DOID:2531!3.51e-07!51;DOID:0060083!3.51e-07!51|ontology_enrichment_disease_v019=DOID:2531;1.13e-07;51!DOID:0060083;1.13e-07;51!DOID:1240;8.45e-07;39|ontology_enrichment_disease_v019_2=DOID:2531,1.17e-10,51;DOID:0060083,1.17e-10,51;DOID:1240,1.33e-08,39|ontology_enrichment_uberon=UBERON:0002390!7.99e-09!102;UBERON:0003061!7.99e-09!102;UBERON:0007023!1.34e-08!115;UBERON:0002193!3.56e-08!112;UBERON:0000178!5.32e-08!15;UBERON:0000179!5.32e-08!15;UBERON:0000463!5.32e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;2.50e-08;15!UBERON:0000179;2.50e-08;15!UBERON:0000463;2.50e-08;15!UBERON:0002390;8.86e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.31e-09,371;UBERON:0000178,2.37e-08,15;UBERON:0000179,2.37e-08,15;UBERON:0000463,2.37e-08,15;UBERON:0004177,7.06e-08,7;UBERON:0005057,7.06e-08,7;UBERON:0002370,4.99e-07,4;UBERON:0005058,4.99e-07,4;UBERON:0009113,4.99e-07,4;UBERON:0003295,4.99e-07,4;UBERON:0005562,4.99e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.32906122652669,5.58284008259631,6.4542840677217,3.14691421479123,18.039981710569,1.70297735647684,0,0,0,6.04244164526353,15.0699386436667,7.34001098337118,0.553995408531877,4.41197784434312,2.38711957787437,1.11957737119962,1.6194683300949,0.257575567634187,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,1.81619850790011,0,0.949387162322653,0,0.212604299965044,0,0,0,0,0,0,0,3.51992488922645,6.00752472388345,5.33705552318133,8.96133467389665,7.60752375368424,4.59801951963587,4.62731410949403,1.90810750907073,7.96898156753228,15.2681669236444,8.79228424688026,15.8605594294831,7.28661131875997,5.26768169550154,7.47497126432566,14.5413982217191,10.6912779479745,3.67810289859492,0.977766799900771,2.36723902867367,0,9.35847837835458,15.9087190036412,20.1595844071095,31.4132481967418,11.6563100950364,15.997299749865,2.13769275984779,1.65810010671509,2.60822777161547,0.14828656316206,0.535081656179426,0,4.19244567980995,4.21542542962113,7.55980380061786,11.3858861408776,6.37130828648194,1.95325036156926,5.70271226669025,2.25862678616659,2.8157054453972,4.99722906209383,6.15620855314444,4.92676798152628,13.9108652825065,20.058014683763,7.24122019413995,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0.132957960518865,3.57735936458013,3.43196946468077,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,16.7755977777567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,1.47798971368783,1.93706554829097,1.86595303986695,1.44119953416961,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81089489577993,13.0040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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9750 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13872 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_uc011dju.1_5end | |||
|coexpression_cluster_id=C4583 | |||
|description=CAGE_peak_4_at_FAM65B_5end | |||
|id=chr6:25042412..25042446,- | |||
|ontology_enrichment_celltype=CL:0000037!2.86e-44!172;CL:0000566!2.86e-44!172;CL:0000542!7.32e-42!53;CL:0000051!7.32e-42!53;CL:0000838!4.82e-41!52;CL:0000988!7.53e-40!182;CL:0000738!2.66e-39!140;CL:0002032!1.70e-38!165;CL:0000837!1.70e-38!165;CL:0002031!8.52e-30!124;CL:0002087!2.82e-29!119;CL:0000084!2.05e-20!25;CL:0000827!2.05e-20!25;CL:0000791!1.18e-18!18;CL:0000789!1.18e-18!18;CL:0002420!1.18e-18!18;CL:0002419!1.18e-18!18;CL:0000790!1.18e-18!18;CL:0000945!4.20e-18!24;CL:0000826!4.20e-18!24;CL:0000236!3.82e-12!14;CL:0000625!6.30e-12!11;CL:0000763!1.72e-08!112;CL:0000049!1.72e-08!112;CL:0000624!1.76e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.00e-32;53!CL:0000084;3.51e-27;25!CL:0000945;1.88e-24;24!CL:0000791;8.78e-24;18!CL:0000789;8.78e-24;18!CL:0002419;8.78e-24;18!CL:0000625;1.63e-16;11!CL:0000236;6.30e-14;13!CL:0002087;5.62e-10;104!CL:0000988;1.19e-08;177!CL:0000624;1.00e-07;6!CL:0000738;1.36e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.24e-57,53;CL:0000051,2.24e-57,53;CL:0000838,3.52e-56,52;CL:0000037,8.27e-47,168;CL:0000988,3.42e-43,177;CL:0000738,1.00e-39,136;CL:0002032,2.19e-39,161;CL:0000837,2.19e-39,161;CL:0002031,1.95e-28,120;CL:0002087,2.18e-28,115;CL:0000084,2.92e-27,25;CL:0000827,2.92e-27,25;CL:0000945,1.61e-24,24;CL:0000826,1.61e-24,24;CL:0000791,6.10e-24,18;CL:0000789,6.10e-24,18;CL:0002420,6.10e-24,18;CL:0002419,6.10e-24,18;CL:0000790,6.10e-24,18;CL:0000625,1.12e-16,11;CL:0000236,2.72e-15,14;CL:0000134,8.61e-11,354;CL:0002320,3.49e-10,361;CL:0000219,5.89e-09,386;CL:0000624,1.03e-07,6;CL:0000034,8.35e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000051;6.00e-32;53!CL:0000790;8.78e-24;18 | |||
|ontology_enrichment_disease=DOID:2531!3.51e-07!51;DOID:0060083!3.51e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.13e-07;51!DOID:0060083;1.13e-07;51!DOID:1240;8.45e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.17e-10,51;DOID:0060083,1.17e-10,51;DOID:1240,1.33e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.99e-09!102;UBERON:0003061!7.99e-09!102;UBERON:0007023!1.34e-08!115;UBERON:0002193!3.56e-08!112;UBERON:0000178!5.32e-08!15;UBERON:0000179!5.32e-08!15;UBERON:0000463!5.32e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.50e-08;15!UBERON:0000179;2.50e-08;15!UBERON:0000463;2.50e-08;15!UBERON:0002390;8.86e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.31e-09,371;UBERON:0000178,2.37e-08,15;UBERON:0000179,2.37e-08,15;UBERON:0000463,2.37e-08,15;UBERON:0004177,7.06e-08,7;UBERON:0005057,7.06e-08,7;UBERON:0002370,4.99e-07,4;UBERON:0005058,4.99e-07,4;UBERON:0009113,4.99e-07,4;UBERON:0003295,4.99e-07,4;UBERON:0005562,4.99e-07,4 | |||
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| |||
|short_description=p4@FAM65B | |||
}} |
Revision as of 19:42, 13 September 2013
Short description: | p4@FAM65B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FAM65B_5end |
Coexpression cluster: | C4583_lymphoma_hairy_b_CD4_CD8_Natural_Burkitt |
Association with transcript: | -14bp_to_uc011dju.1_5end |
EntrezGene: | FAM65B |
HGNC: | 13872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.24e-57 | 53 |
common lymphoid progenitor | 2.24e-57 | 53 |
lymphoid lineage restricted progenitor cell | 3.52e-56 | 52 |
hematopoietic stem cell | 8.27e-47 | 168 |
hematopoietic cell | 3.42e-43 | 177 |
leukocyte | 1.00e-39 | 136 |
hematopoietic oligopotent progenitor cell | 2.19e-39 | 161 |
hematopoietic multipotent progenitor cell | 2.19e-39 | 161 |
hematopoietic lineage restricted progenitor cell | 1.95e-28 | 120 |
nongranular leukocyte | 2.18e-28 | 115 |
T cell | 2.92e-27 | 25 |
pro-T cell | 2.92e-27 | 25 |
lymphocyte of B lineage | 1.61e-24 | 24 |
pro-B cell | 1.61e-24 | 24 |
mature alpha-beta T cell | 6.10e-24 | 18 |
alpha-beta T cell | 6.10e-24 | 18 |
immature T cell | 6.10e-24 | 18 |
mature T cell | 6.10e-24 | 18 |
immature alpha-beta T cell | 6.10e-24 | 18 |
CD8-positive, alpha-beta T cell | 1.12e-16 | 11 |
B cell | 2.72e-15 | 14 |
mesenchymal cell | 8.61e-11 | 354 |
connective tissue cell | 3.49e-10 | 361 |
motile cell | 5.89e-09 | 386 |
CD4-positive, alpha-beta T cell | 1.03e-07 | 6 |
stem cell | 8.35e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.31e-09 | 371 |
blood | 2.37e-08 | 15 |
haemolymphatic fluid | 2.37e-08 | 15 |
organism substance | 2.37e-08 | 15 |
hemopoietic organ | 7.06e-08 | 7 |
immune organ | 7.06e-08 | 7 |
thymus | 4.99e-07 | 4 |
hemolymphoid system gland | 4.99e-07 | 4 |
thymic region | 4.99e-07 | 4 |
pharyngeal gland | 4.99e-07 | 4 |
thymus primordium | 4.99e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.17e-10 | 51 |
immune system cancer | 1.17e-10 | 51 |
leukemia | 1.33e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.