FFCP PHASE1:Mm9::chr1:173260427..173260433,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:173260427..173260433,-|id=chr1:173260427..173260433,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,8.72e-24,3;CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000057,1.16e-18,1;CL:0000632,1.16e-18,1;CL:0000223,1.33e-14,20;CL:0000066,8.00e-12,25;CL:0002076,3.43e-11,15;CL:0002563,1.20e-08,9;CL:0002251,1.20e-08,9;CL:0000215,3.18e-07,3;CL:0002293,3.64e-07,3;CL:0000151,4.17e-07,3;CL:0000499,4.17e-07,3;CL:0000327,4.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1;UBERON:0003350,1.20e-08,9;UBERON:0004808,1.20e-08,9;UBERON:0001277,1.20e-08,9;UBERON:0003929,1.55e-08,55;UBERON:0000485,3.00e-07,11;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73310971850765,0.166234645358492,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.183546752161682,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,23.7688880735376,2.58127163094416,0,0.539703191637817,0.649776417447669,0,0,0.511290967734173,0.259786004602869,0.35333957451034,0,0,5.09610479413291,0,0.216491041011214,0,0,0,0,0.29688427812965,0,0,0.230615497256059,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0.134206418760372,0.420579897128254,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0,0.430846795465598,0.955875191810208,0.445597348164788,0.283076530788832,0,0,0.790575555893047,0.321321316421807,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.65954501176592,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:173260427..173260433,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:173260427..173260433,- | |||
|id=chr1:173260427..173260433,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,8.72e-24,3;CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000057,1.16e-18,1;CL:0000632,1.16e-18,1;CL:0000223,1.33e-14,20;CL:0000066,8.00e-12,25;CL:0002076,3.43e-11,15;CL:0002563,1.20e-08,9;CL:0002251,1.20e-08,9;CL:0000215,3.18e-07,3;CL:0002293,3.64e-07,3;CL:0000151,4.17e-07,3;CL:0000499,4.17e-07,3;CL:0000327,4.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1;UBERON:0003350,1.20e-08,9;UBERON:0004808,1.20e-08,9;UBERON:0001277,1.20e-08,9;UBERON:0003929,1.55e-08,55;UBERON:0000485,3.00e-07,11;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73310971850765,0.166234645358492,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.183546752161682,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,23.7688880735376,2.58127163094416,0,0.539703191637817,0.649776417447669,0,0,0.511290967734173,0.259786004602869,0.35333957451034,0,0,5.09610479413291,0,0.216491041011214,0,0,0,0,0.29688427812965,0,0,0.230615497256059,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0.134206418760372,0.420579897128254,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0,0.430846795465598,0.955875191810208,0.445597348164788,0.283076530788832,0,0,0.790575555893047,0.321321316421807,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.65954501176592,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:173260427..173260433,- | |||
}} |
Revision as of 19:40, 13 September 2013
Short description: | p@chr1:173260427..173260433, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173260427..173260433, - |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 8.72e-24 | 3 |
lining cell | 5.15e-19 | 1 |
meso-epithelial cell | 5.15e-19 | 1 |
endothelial cell | 5.15e-19 | 1 |
endothelial cell of sinusoid | 5.15e-19 | 1 |
endothelial cell of hepatic sinusoid | 5.15e-19 | 1 |
fibroblast | 1.16e-18 | 1 |
hepatic stellate cell | 1.16e-18 | 1 |
endodermal cell | 1.33e-14 | 20 |
epithelial cell | 8.00e-12 | 25 |
endo-epithelial cell | 3.43e-11 | 15 |
intestinal epithelial cell | 1.20e-08 | 9 |
epithelial cell of alimentary canal | 1.20e-08 | 9 |
barrier cell | 3.18e-07 | 3 |
epithelial cell of thymus | 3.64e-07 | 3 |
secretory cell | 4.17e-07 | 3 |
stromal cell | 4.17e-07 | 3 |
extracellular matrix secreting cell | 4.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.15e-19 | 1 |
hepatic sinusoid | 5.15e-19 | 1 |
parenchyma | 5.15e-19 | 1 |
abdomen blood vessel | 5.15e-19 | 1 |
sinusoid | 5.15e-19 | 1 |
digestive system duct | 5.15e-19 | 1 |
abdominal segment blood vessel | 5.15e-19 | 1 |
trunk blood vessel | 5.15e-19 | 1 |
liver parenchyma | 5.15e-19 | 1 |
liver lobule | 5.15e-19 | 1 |
biliary system | 5.15e-19 | 1 |
biliary tree | 5.15e-19 | 1 |
biliary bud | 5.15e-19 | 1 |
hepatic duct | 5.15e-19 | 1 |
epithelium of mucosa | 1.20e-08 | 9 |
gastrointestinal system epithelium | 1.20e-08 | 9 |
intestinal epithelium | 1.20e-08 | 9 |
gut epithelium | 1.55e-08 | 55 |
simple columnar epithelium | 3.00e-07 | 11 |
unilaminar epithelium | 3.36e-07 | 66 |
endo-epithelium | 6.58e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.