FFCP PHASE1:Mm9::chr1:173089678..173089690,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17528|HGNC=|MCL_coexpression_id=560|UniProt=|association_with_transcript=-34bp_to_ENSMUST00000149352_5end|description=CAGE_peak_3_at_Mpz_5end|id=chr1:173089678..173089690,+|ontology_enrichment_celltype=CL:0000630!1.01e-07!3|ontology_enrichment_celltype_v019_2=CL:0002611,3.08e-19,2;CL:0002612,8.30e-13,3;CL:0000710,1.03e-09,1;CL:0002077,1.03e-09,1;CL:0005014,1.03e-09,1;CL:0002315,1.03e-09,1;CL:0002490,1.03e-09,1;CL:0000221,3.58e-07,44;CL:0000133,3.58e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!5.76e-11!6;UBERON:0005174!5.76e-11!6;UBERON:0001137!5.76e-11!6;UBERON:0001948!6.86e-09!5;UBERON:0002315!6.86e-09!5;UBERON:0003076!5.15e-07!12;UBERON:0003057!5.15e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001948,4.27e-29,5;UBERON:0002315,4.27e-29,5;UBERON:0002240,2.47e-24,6;UBERON:0005174,2.47e-24,6;UBERON:0001137,2.47e-24,6;UBERON:0002256,3.08e-19,2;UBERON:0002257,8.30e-13,3;UBERON:0003076,2.25e-12,12;UBERON:0003057,2.25e-12,12;UBERON:0001374,4.59e-10,1;UBERON:0004252,4.59e-10,1;UBERON:0003663,4.59e-10,1;UBERON:0005090,4.59e-10,1;UBERON:0001630,4.59e-10,1;UBERON:0003661,4.59e-10,1;UBERON:0010890,4.59e-10,1;UBERON:0001383,4.59e-10,1;UBERON:0000489,3.39e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28476476605705,9.49734726091938,0,0,0,0,0,0,0,0,0,0,0,0,2.35702868378934,2.70506193518296,0,3.18050011999373,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.120625849856312,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.382576664137687,2.20591419119516,1.39120701372253|short_description=p3@Mpz}} | ||
|EntrezGene=17528 | |||
|HGNC= | |||
|MCL_coexpression_id=560 | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENSMUST00000149352_5end | |||
|description=CAGE_peak_3_at_Mpz_5end | |||
|id=chr1:173089678..173089690,+ | |||
|ontology_enrichment_celltype=CL:0000630!1.01e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,3.08e-19,2;CL:0002612,8.30e-13,3;CL:0000710,1.03e-09,1;CL:0002077,1.03e-09,1;CL:0005014,1.03e-09,1;CL:0002315,1.03e-09,1;CL:0002490,1.03e-09,1;CL:0000221,3.58e-07,44;CL:0000133,3.58e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!5.76e-11!6;UBERON:0005174!5.76e-11!6;UBERON:0001137!5.76e-11!6;UBERON:0001948!6.86e-09!5;UBERON:0002315!6.86e-09!5;UBERON:0003076!5.15e-07!12;UBERON:0003057!5.15e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,4.27e-29,5;UBERON:0002315,4.27e-29,5;UBERON:0002240,2.47e-24,6;UBERON:0005174,2.47e-24,6;UBERON:0001137,2.47e-24,6;UBERON:0002256,3.08e-19,2;UBERON:0002257,8.30e-13,3;UBERON:0003076,2.25e-12,12;UBERON:0003057,2.25e-12,12;UBERON:0001374,4.59e-10,1;UBERON:0004252,4.59e-10,1;UBERON:0003663,4.59e-10,1;UBERON:0005090,4.59e-10,1;UBERON:0001630,4.59e-10,1;UBERON:0003661,4.59e-10,1;UBERON:0010890,4.59e-10,1;UBERON:0001383,4.59e-10,1;UBERON:0000489,3.39e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28476476605705,9.49734726091938,0,0,0,0,0,0,0,0,0,0,0,0,2.35702868378934,2.70506193518296,0,3.18050011999373,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.120625849856312,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.382576664137687,2.20591419119516,1.39120701372253 | |||
|short_description=p3@Mpz | |||
}} |
Revision as of 19:39, 13 September 2013
Short description: | p3@Mpz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mpz_5end |
Coexpression cluster: | MCL_coexpression_mm9:560 |
Association with transcript: | -34bp_to_ENSMUST00000149352_5end |
EntrezGene: | Mpz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 3.08e-19 | 2 |
neuron of the ventral spinal cord | 8.30e-13 | 3 |
neurecto-epithelial cell | 1.03e-09 | 1 |
ecto-epithelial cell | 1.03e-09 | 1 |
auditory epithelial support cell | 1.03e-09 | 1 |
supporting cell of cochlea | 1.03e-09 | 1 |
organ of Corti supporting cell | 1.03e-09 | 1 |
ectodermal cell | 3.58e-07 | 44 |
neurectodermal cell | 3.58e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 4.27e-29 | 5 |
gray matter of spinal cord | 4.27e-29 | 5 |
spinal cord | 2.47e-24 | 6 |
dorsal region element | 2.47e-24 | 6 |
dorsum | 2.47e-24 | 6 |
dorsal horn of spinal cord | 3.08e-19 | 2 |
ventral horn of spinal cord | 8.30e-13 | 3 |
posterior neural tube | 2.25e-12 | 12 |
chordal neural plate | 2.25e-12 | 12 |
biceps femoris | 4.59e-10 | 1 |
hindlimb stylopod muscle | 4.59e-10 | 1 |
hindlimb muscle | 4.59e-10 | 1 |
muscle structure | 4.59e-10 | 1 |
muscle organ | 4.59e-10 | 1 |
limb muscle | 4.59e-10 | 1 |
pelvic complex muscle | 4.59e-10 | 1 |
muscle of leg | 4.59e-10 | 1 |
cavitated compound organ | 3.39e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.