FFCP PHASE1:Mm9::chr19:3972475..3972503,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=621603|HGNC=|MCL_coexpression_id=28|UniProt=E9Q3E1|association_with_transcript=147bp_to_ENSMUST00000143380,NM_001177438,uc008fxw.2_5end|description=CAGE_peak_1_at_Aldh3b2_5end|id=chr19:3972475..3972503,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!5.25e-10!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.38e-12,22;UBERON:0000014,4.64e-07,5;UBERON:0001003,4.64e-07,5;UBERON:0002097,4.64e-07,5;UBERON:0002199,4.64e-07,5;UBERON:0007029,4.64e-07,5;UBERON:0007376,4.64e-07,5;UBERON:0002416,4.64e-07,5;UBERON:0007383,4.64e-07,5;UBERON:0002102,7.01e-07,7;UBERON:0004710,7.01e-07,7;UBERON:0005419,7.01e-07,7;UBERON:0005417,7.01e-07,7;UBERON:0005729,7.01e-07,7;UBERON:0000945,7.18e-07,16;UBERON:0010039,7.18e-07,16|phase1_expression=0,0,0,0,0,0,0.934450562382103,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0.137114433605739,0,0.510259740906419,0,0,0,0.45881856213434,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74133216632409,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,2.8545969929765,0,0.593768556259299,0.173485326766136,0,0,0,0,2.01066546127481,1.23597483867187,3.47038456607788,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,2.77995034277042,219.280413833706,0.520481771850815,0.229902104433473,1.26043490863744,2.26057226753573,0.544291993210623,0.12811372028485,0.468508622798644,56.1386314503664,1.5089759505299,1.51284864134255,2.99116911078713,9.20622076195814,8.06337022754234,8.00979983000983,13.3758388665163,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0.528901133327089,0,1.39342003116263,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0.432276099749388,1.1948476395262,0.379335801906163,0.342745537829186,1.1270773567308,1.4255592949172,1.55161989734101,0.841629838683823,0.505892296994058,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,1.34005005953453,0.714130922658041,0,0.472905432318573,0.8858587585951,0.637819074629948,3.76885623846197,0,0.144649058581512,0,0,0,1.37968373152366,0,0,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0,0,14.0803024838226,7.41412248023371,0.441056796109924,38.9131556941893,16.7923003763742,34.5593059838333,52.52383136138,62.8659646023585,0,0,0.512612642393558,0.206386867963223,0,2.26042148405629,0.820165366326151,2.51655990527175,0,0,0,32.4588010125139,0,3.25311147402958,13.068646239438,20.072476417389,25.5484199583028,26.4334118914249,21.3245915771367,45.2837779632371,3.36998930558661,34.1736622197809,0,0.149516546043979,0,0.194451188344048,0,0,0,0.39061315453185,0,0,0.288030006257865,0.316011120628178,4.05450430580328,2.77319584345034,1.29920822977795,0.716106782669926,0.198681354781265,1.44234539423963,0.295379054349154,2.3222283488074,0.838274873204998,2.52065462842101,1.07203668813728,0.865906574762965,0.701261413089414,36.0501309948186,1.55390167361845,0.179427713218951,3.69346156000973,57.1841198335284,1.87682475451182,0.36630324853453,26.7960473848832,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.03787347584177,1.99512436700516,1.02440163452481,5.34834777550247,3.98265008993166,3.12533964365024,0.888986911206461,2.47242068686673,1.92551525755089,2.77966932940177,2.5347929989024,1.13175804831646,1.40462261204824,1.53660365771686,1.78049953762401,0.952587382566147,1.0429589335037,3.08654752741928,2.47251540481984,2.50238164228475,1.02860775715625,1.77475806159337,0.238436189947321,1.30811774969096,1.50575008664529,2.19997980518359,1.28049581010941,2.36762740294059,2.8518863907631,1.68342681497322,2.01679530811096,1.87158516513571,0.818462086339379,1.54936841185966,4.82266527452853,8.74337022782811,5.84829021113521,6.44613162144895,2.29545998482612,6.83833399270498,2.31867835620421|short_description=p1@Aldh3b2}} | ||
|EntrezGene=621603 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt=E9Q3E1 | |||
|association_with_transcript=147bp_to_ENSMUST00000143380,NM_001177438,uc008fxw.2_5end | |||
|description=CAGE_peak_1_at_Aldh3b2_5end | |||
|id=chr19:3972475..3972503,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.25e-10!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.38e-12,22;UBERON:0000014,4.64e-07,5;UBERON:0001003,4.64e-07,5;UBERON:0002097,4.64e-07,5;UBERON:0002199,4.64e-07,5;UBERON:0007029,4.64e-07,5;UBERON:0007376,4.64e-07,5;UBERON:0002416,4.64e-07,5;UBERON:0007383,4.64e-07,5;UBERON:0002102,7.01e-07,7;UBERON:0004710,7.01e-07,7;UBERON:0005419,7.01e-07,7;UBERON:0005417,7.01e-07,7;UBERON:0005729,7.01e-07,7;UBERON:0000945,7.18e-07,16;UBERON:0010039,7.18e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0.934450562382103,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0.137114433605739,0,0.510259740906419,0,0,0,0.45881856213434,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74133216632409,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,2.8545969929765,0,0.593768556259299,0.173485326766136,0,0,0,0,2.01066546127481,1.23597483867187,3.47038456607788,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,2.77995034277042,219.280413833706,0.520481771850815,0.229902104433473,1.26043490863744,2.26057226753573,0.544291993210623,0.12811372028485,0.468508622798644,56.1386314503664,1.5089759505299,1.51284864134255,2.99116911078713,9.20622076195814,8.06337022754234,8.00979983000983,13.3758388665163,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0.528901133327089,0,1.39342003116263,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0.432276099749388,1.1948476395262,0.379335801906163,0.342745537829186,1.1270773567308,1.4255592949172,1.55161989734101,0.841629838683823,0.505892296994058,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,1.34005005953453,0.714130922658041,0,0.472905432318573,0.8858587585951,0.637819074629948,3.76885623846197,0,0.144649058581512,0,0,0,1.37968373152366,0,0,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0,0,14.0803024838226,7.41412248023371,0.441056796109924,38.9131556941893,16.7923003763742,34.5593059838333,52.52383136138,62.8659646023585,0,0,0.512612642393558,0.206386867963223,0,2.26042148405629,0.820165366326151,2.51655990527175,0,0,0,32.4588010125139,0,3.25311147402958,13.068646239438,20.072476417389,25.5484199583028,26.4334118914249,21.3245915771367,45.2837779632371,3.36998930558661,34.1736622197809,0,0.149516546043979,0,0.194451188344048,0,0,0,0.39061315453185,0,0,0.288030006257865,0.316011120628178,4.05450430580328,2.77319584345034,1.29920822977795,0.716106782669926,0.198681354781265,1.44234539423963,0.295379054349154,2.3222283488074,0.838274873204998,2.52065462842101,1.07203668813728,0.865906574762965,0.701261413089414,36.0501309948186,1.55390167361845,0.179427713218951,3.69346156000973,57.1841198335284,1.87682475451182,0.36630324853453,26.7960473848832,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.03787347584177,1.99512436700516,1.02440163452481,5.34834777550247,3.98265008993166,3.12533964365024,0.888986911206461,2.47242068686673,1.92551525755089,2.77966932940177,2.5347929989024,1.13175804831646,1.40462261204824,1.53660365771686,1.78049953762401,0.952587382566147,1.0429589335037,3.08654752741928,2.47251540481984,2.50238164228475,1.02860775715625,1.77475806159337,0.238436189947321,1.30811774969096,1.50575008664529,2.19997980518359,1.28049581010941,2.36762740294059,2.8518863907631,1.68342681497322,2.01679530811096,1.87158516513571,0.818462086339379,1.54936841185966,4.82266527452853,8.74337022782811,5.84829021113521,6.44613162144895,2.29545998482612,6.83833399270498,2.31867835620421 | |||
|short_description=p1@Aldh3b2 | |||
}} |
Revision as of 17:33, 13 September 2013
Short description: | p1@Aldh3b2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aldh3b2_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 147bp_to_ENSMUST00000143380, NM_001177438, uc008fxw.2_5end |
EntrezGene: | Aldh3b2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 3.38e-12 | 22 |
zone of skin | 4.64e-07 | 5 |
skin epidermis | 4.64e-07 | 5 |
skin of body | 4.64e-07 | 5 |
integument | 4.64e-07 | 5 |
surface | 4.64e-07 | 5 |
outer epithelium | 4.64e-07 | 5 |
integumental system | 4.64e-07 | 5 |
enveloping layer of ectoderm | 4.64e-07 | 5 |
forelimb | 7.01e-07 | 7 |
pectoral appendage | 7.01e-07 | 7 |
pectoral appendage bud | 7.01e-07 | 7 |
forelimb bud | 7.01e-07 | 7 |
forelimb/pectoral fin field | 7.01e-07 | 7 |
stomach | 7.18e-07 | 16 |
food storage organ | 7.18e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.