FFCP PHASE1:Mm9::chr19:19142078..19142119,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=253|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:19142078..19142119,-|id=chr19:19142078..19142119,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!2.72e-22!9;UBERON:0000019!2.72e-22!9;UBERON:0000047!2.72e-22!9;UBERON:0004088!2.72e-22!9;UBERON:0002104!2.72e-22!9;UBERON:0001456!2.72e-22!9;UBERON:0003072!2.72e-22!9;UBERON:0003071!2.72e-22!9;UBERON:0004128!2.72e-22!9;UBERON:0001444!4.24e-18!11;UBERON:0000020!1.59e-16!12;UBERON:0001032!1.59e-16!12;UBERON:0004456!1.59e-16!12;UBERON:0005085!3.42e-15!13;UBERON:0002021!6.55e-15!10;UBERON:0000411!6.55e-15!10;UBERON:0001950!6.55e-15!10;UBERON:0003056!2.04e-14!49;UBERON:0000033!2.15e-12!63;UBERON:0002346!3.58e-09!71;UBERON:0003075!3.58e-09!71;UBERON:0007284!3.58e-09!71;UBERON:0002619!1.51e-08!17;UBERON:0007811!2.34e-08!86;UBERON:0004121!1.02e-07!102;UBERON:0000924!1.02e-07!102;UBERON:0006601!1.02e-07!102;UBERON:0000153!2.05e-07!94;UBERON:0000956!8.23e-07!21;UBERON:0001869!8.23e-07!21;UBERON:0000203!8.23e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.30e-18,9;UBERON:0000019,2.30e-18,9;UBERON:0000047,2.30e-18,9;UBERON:0010312,2.30e-18,9;UBERON:0004088,2.30e-18,9;UBERON:0002104,2.30e-18,9;UBERON:0001456,2.30e-18,9;UBERON:0003072,2.30e-18,9;UBERON:0004128,2.30e-18,9;UBERON:0003071,2.30e-18,9;UBERON:0001444,3.43e-15,11;UBERON:0000020,5.35e-14,12;UBERON:0001032,5.35e-14,12;UBERON:0004456,5.35e-14,12;UBERON:0000033,5.49e-13,13;UBERON:0005085,5.49e-13,13;UBERON:0003056,1.64e-09,49;UBERON:0002021,7.02e-08,10;UBERON:0000411,7.02e-08,10;UBERON:0001950,7.02e-08,10;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390361328888111,0.229902104433473,0,4.52114453507145,1.42876648217788,1.7935920839879,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,1.03111909406213,0,0,0.675022500231806,0.900642406448441,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr19:19142078..19142119,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=253 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:19142078..19142119,- | |||
|id=chr19:19142078..19142119,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.72e-22!9;UBERON:0000019!2.72e-22!9;UBERON:0000047!2.72e-22!9;UBERON:0004088!2.72e-22!9;UBERON:0002104!2.72e-22!9;UBERON:0001456!2.72e-22!9;UBERON:0003072!2.72e-22!9;UBERON:0003071!2.72e-22!9;UBERON:0004128!2.72e-22!9;UBERON:0001444!4.24e-18!11;UBERON:0000020!1.59e-16!12;UBERON:0001032!1.59e-16!12;UBERON:0004456!1.59e-16!12;UBERON:0005085!3.42e-15!13;UBERON:0002021!6.55e-15!10;UBERON:0000411!6.55e-15!10;UBERON:0001950!6.55e-15!10;UBERON:0003056!2.04e-14!49;UBERON:0000033!2.15e-12!63;UBERON:0002346!3.58e-09!71;UBERON:0003075!3.58e-09!71;UBERON:0007284!3.58e-09!71;UBERON:0002619!1.51e-08!17;UBERON:0007811!2.34e-08!86;UBERON:0004121!1.02e-07!102;UBERON:0000924!1.02e-07!102;UBERON:0006601!1.02e-07!102;UBERON:0000153!2.05e-07!94;UBERON:0000956!8.23e-07!21;UBERON:0001869!8.23e-07!21;UBERON:0000203!8.23e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.30e-18,9;UBERON:0000019,2.30e-18,9;UBERON:0000047,2.30e-18,9;UBERON:0010312,2.30e-18,9;UBERON:0004088,2.30e-18,9;UBERON:0002104,2.30e-18,9;UBERON:0001456,2.30e-18,9;UBERON:0003072,2.30e-18,9;UBERON:0004128,2.30e-18,9;UBERON:0003071,2.30e-18,9;UBERON:0001444,3.43e-15,11;UBERON:0000020,5.35e-14,12;UBERON:0001032,5.35e-14,12;UBERON:0004456,5.35e-14,12;UBERON:0000033,5.49e-13,13;UBERON:0005085,5.49e-13,13;UBERON:0003056,1.64e-09,49;UBERON:0002021,7.02e-08,10;UBERON:0000411,7.02e-08,10;UBERON:0001950,7.02e-08,10;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390361328888111,0.229902104433473,0,4.52114453507145,1.42876648217788,1.7935920839879,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,1.03111909406213,0,0,0.675022500231806,0.900642406448441,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:19142078..19142119,- | |||
}} |
Revision as of 17:09, 13 September 2013
Short description: | p@chr19:19142078..19142119, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:19142078..19142119, - |
Coexpression cluster: | MCL_coexpression_mm9:253 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.30e-18 | 9 |
camera-type eye | 2.30e-18 | 9 |
simple eye | 2.30e-18 | 9 |
immature eye | 2.30e-18 | 9 |
ocular region | 2.30e-18 | 9 |
visual system | 2.30e-18 | 9 |
face | 2.30e-18 | 9 |
optic cup | 2.30e-18 | 9 |
optic vesicle | 2.30e-18 | 9 |
eye primordium | 2.30e-18 | 9 |
subdivision of head | 3.43e-15 | 11 |
sense organ | 5.35e-14 | 12 |
sensory system | 5.35e-14 | 12 |
entire sense organ system | 5.35e-14 | 12 |
head | 5.49e-13 | 13 |
ectodermal placode | 5.49e-13 | 13 |
pre-chordal neural plate | 1.64e-09 | 49 |
occipital lobe | 7.02e-08 | 10 |
visual cortex | 7.02e-08 | 10 |
neocortex | 7.02e-08 | 10 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.