FFCP PHASE1:Hg19::chr5:98129974..98129990,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285704|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=26896|TSSclassifier=N|UniProt=|association_with_transcript=-274bp_to_BC020513_5end|description=CAGE_peak_21_at_RGMB_5end|id=chr5:98129974..98129990,+|ontology_enrichment_celltype=CL:0000055!1.97e-10!180;CL:0002620!2.18e-08!23;CL:0000057!8.52e-08!75;CL:0000680!1.76e-07!57;CL:0000056!1.76e-07!57;CL:0000355!1.76e-07!57|ontology_enrichment_celltype_v019=CL:0000135;2.54e-13;3!CL:0000388;2.54e-13;3!CL:0000228;2.28e-10;1!CL:0002372;2.28e-10;1!CL:0000056;5.70e-10;4|ontology_enrichment_celltype_v019_2=CL:0000135,3.79e-13,3;CL:0000388,3.79e-13,3;CL:0000228,1.89e-10,1;CL:0002372,1.89e-10,1;CL:0000515,7.48e-10,4|ontology_enrichment_development_v019=UBERON:0003099;2.28e-10;1!UBERON:0003852;2.28e-10;1!CL:0000515;5.70e-10;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;8.93e-11;1|ontology_enrichment_disease_v019_2=DOID:2513,8.95e-11,1|ontology_enrichment_uberon=UBERON:0000475!2.58e-08!365;UBERON:0000481!7.74e-08!347;UBERON:0000914!8.32e-08!83;UBERON:0002329!8.32e-08!83;UBERON:0003077!8.32e-08!83;UBERON:0003059!8.32e-08!83;UBERON:0007282!8.32e-08!83;UBERON:0009618!8.32e-08!83;UBERON:0007285!8.32e-08!83;UBERON:0004290!3.19e-07!70;UBERON:0001134!5.47e-07!61;UBERON:0002036!5.47e-07!61;UBERON:0003082!5.47e-07!61;UBERON:0000486!9.14e-07!82|ontology_enrichment_uberon_v019=UBERON:0007846;2.54e-13;3!UBERON:0000043;2.54e-13;3!UBERON:0007845;2.54e-13;3!UBERON:0005705;2.28e-10;1!UBERON:0008193;2.28e-10;1!UBERON:0010912;2.28e-10;1!UBERON:0002514;2.28e-10;1!UBERON:0003457;2.28e-10;1!UBERON:0008907;2.28e-10;1!UBERON:0008001;2.28e-10;1!UBERON:0007213;2.28e-10;1!UBERON:0009891;2.28e-10;1!UBERON:0007914;2.28e-10;1!UBERON:0007375;2.28e-10;1!UBERON:0003323;2.28e-10;1!UBERON:0010258;2.28e-10;1!UBERON:0005253;2.28e-10;1!UBERON:0007842;2.28e-10;1!UBERON:0002397;2.28e-10;1!UBERON:0003113;2.28e-10;1!UBERON:0003277;2.28e-10;1!UBERON:0001709;2.28e-10;1!UBERON:0002244;2.28e-10;1!UBERON:0005620;2.28e-10;1!UBERON:0010364;2.28e-10;1!UBERON:0004288;2.28e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.79e-13,3;UBERON:0000043,3.79e-13,3;UBERON:0007845,3.79e-13,3;UBERON:0005705,2.28e-10,1;UBERON:0008193,2.28e-10,1;UBERON:0010912,2.28e-10,1;UBERON:0002514,2.28e-10,1;UBERON:0003457,2.28e-10,1;UBERON:0008907,2.28e-10,1;UBERON:0008001,2.28e-10,1;UBERON:0007213,2.28e-10,1;UBERON:0009891,2.28e-10,1;UBERON:0007914,2.28e-10,1;UBERON:0009292,2.28e-10,1;UBERON:0003099,2.28e-10,1;UBERON:0007375,2.28e-10,1;UBERON:0003323,2.28e-10,1;UBERON:0010258,2.28e-10,1;UBERON:0007842,2.28e-10,1;UBERON:0009494,2.28e-10,1;UBERON:0010042,2.28e-10,1;UBERON:0010045,2.28e-10,1;UBERON:0010259,2.28e-10,1;UBERON:0010359,2.28e-10,1;UBERON:0009526,2.28e-10,1;UBERON:0002397,2.28e-10,1;UBERON:0003113,2.28e-10,1;UBERON:0003277,2.28e-10,1;UBERON:0001709,2.28e-10,1;UBERON:0004066,2.28e-10,1;UBERON:0002244,2.28e-10,1;UBERON:0005620,2.28e-10,1;UBERON:0004362,2.28e-10,1;UBERON:0010364,2.28e-10,1;UBERON:0010046,2.28e-10,1;UBERON:0005868,2.28e-10,1;UBERON:0007238,2.28e-10,1;UBERON:0004288,2.28e-10,1;UBERON:0004068,2.28e-10,1;UBERON:0010334,2.28e-10,1;UBERON:0003852,2.28e-10,1;UBERON:0010253,2.28e-10,1|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0,0.468642863667593,0,0,0.747243402759005,0.23486899728753,0.323745888736263,0.140450806702248,0,0.61417158655884,0,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0,0.226864366320042,0.89694817844431,0.427114777637135,0.635795703478686,0.900273288253207,0.412210116953756,0,0,0.168776332241266,0.194874010322397,1.51460264546469,0.552299391853796,0.323292113637624,1.42003837006646,0.906768884048762,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.531876233169741,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0.791951872933429,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=285704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26896 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-274bp_to_BC020513_5end | |||
|description=CAGE_peak_21_at_RGMB_5end | |||
|id=chr5:98129974..98129990,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.97e-10!180;CL:0002620!2.18e-08!23;CL:0000057!8.52e-08!75;CL:0000680!1.76e-07!57;CL:0000056!1.76e-07!57;CL:0000355!1.76e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.54e-13;3!CL:0000388;2.54e-13;3!CL:0000228;2.28e-10;1!CL:0002372;2.28e-10;1!CL:0000056;5.70e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.79e-13,3;CL:0000388,3.79e-13,3;CL:0000228,1.89e-10,1;CL:0002372,1.89e-10,1;CL:0000515,7.48e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.28e-10;1!UBERON:0003852;2.28e-10;1!CL:0000515;5.70e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;8.93e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,8.95e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.58e-08!365;UBERON:0000481!7.74e-08!347;UBERON:0000914!8.32e-08!83;UBERON:0002329!8.32e-08!83;UBERON:0003077!8.32e-08!83;UBERON:0003059!8.32e-08!83;UBERON:0007282!8.32e-08!83;UBERON:0009618!8.32e-08!83;UBERON:0007285!8.32e-08!83;UBERON:0004290!3.19e-07!70;UBERON:0001134!5.47e-07!61;UBERON:0002036!5.47e-07!61;UBERON:0003082!5.47e-07!61;UBERON:0000486!9.14e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.54e-13;3!UBERON:0000043;2.54e-13;3!UBERON:0007845;2.54e-13;3!UBERON:0005705;2.28e-10;1!UBERON:0008193;2.28e-10;1!UBERON:0010912;2.28e-10;1!UBERON:0002514;2.28e-10;1!UBERON:0003457;2.28e-10;1!UBERON:0008907;2.28e-10;1!UBERON:0008001;2.28e-10;1!UBERON:0007213;2.28e-10;1!UBERON:0009891;2.28e-10;1!UBERON:0007914;2.28e-10;1!UBERON:0007375;2.28e-10;1!UBERON:0003323;2.28e-10;1!UBERON:0010258;2.28e-10;1!UBERON:0005253;2.28e-10;1!UBERON:0007842;2.28e-10;1!UBERON:0002397;2.28e-10;1!UBERON:0003113;2.28e-10;1!UBERON:0003277;2.28e-10;1!UBERON:0001709;2.28e-10;1!UBERON:0002244;2.28e-10;1!UBERON:0005620;2.28e-10;1!UBERON:0010364;2.28e-10;1!UBERON:0004288;2.28e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.79e-13,3;UBERON:0000043,3.79e-13,3;UBERON:0007845,3.79e-13,3;UBERON:0005705,2.28e-10,1;UBERON:0008193,2.28e-10,1;UBERON:0010912,2.28e-10,1;UBERON:0002514,2.28e-10,1;UBERON:0003457,2.28e-10,1;UBERON:0008907,2.28e-10,1;UBERON:0008001,2.28e-10,1;UBERON:0007213,2.28e-10,1;UBERON:0009891,2.28e-10,1;UBERON:0007914,2.28e-10,1;UBERON:0009292,2.28e-10,1;UBERON:0003099,2.28e-10,1;UBERON:0007375,2.28e-10,1;UBERON:0003323,2.28e-10,1;UBERON:0010258,2.28e-10,1;UBERON:0007842,2.28e-10,1;UBERON:0009494,2.28e-10,1;UBERON:0010042,2.28e-10,1;UBERON:0010045,2.28e-10,1;UBERON:0010259,2.28e-10,1;UBERON:0010359,2.28e-10,1;UBERON:0009526,2.28e-10,1;UBERON:0002397,2.28e-10,1;UBERON:0003113,2.28e-10,1;UBERON:0003277,2.28e-10,1;UBERON:0001709,2.28e-10,1;UBERON:0004066,2.28e-10,1;UBERON:0002244,2.28e-10,1;UBERON:0005620,2.28e-10,1;UBERON:0004362,2.28e-10,1;UBERON:0010364,2.28e-10,1;UBERON:0010046,2.28e-10,1;UBERON:0005868,2.28e-10,1;UBERON:0007238,2.28e-10,1;UBERON:0004288,2.28e-10,1;UBERON:0004068,2.28e-10,1;UBERON:0010334,2.28e-10,1;UBERON:0003852,2.28e-10,1;UBERON:0010253,2.28e-10,1 | |||
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| |||
|short_description=p21@RGMB | |||
}} |
Revision as of 17:04, 13 September 2013
Short description: | p21@RGMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_RGMB_5end |
Coexpression cluster: | NA |
Association with transcript: | -274bp_to_BC020513_5end |
EntrezGene: | RGMB |
HGNC: | 26896 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.79e-13 | 3 |
tendon cell | 3.79e-13 | 3 |
multinucleate cell | 1.89e-10 | 1 |
myotube | 1.89e-10 | 1 |
skeletal muscle myoblast | 7.48e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 8.95e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.