FFCP PHASE1:Mm9::chr18:43847313..43847325,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76217|HGNC=|MCL_coexpression_id=1|UniProt=D3YXK0|association_with_transcript=101bp_to_ENSMUST00000082254,NM_001163637,uc008euk.2_5end|description=CAGE_peak_5_at_Jakmip2_5end|id=chr18:43847313..43847325,-|ontology_enrichment_celltype=CL:0000117!2.89e-16!23;CL:0000337!2.89e-16!23;CL:0000540!6.77e-14!33;CL:0000047!6.77e-14!33;CL:0000031!6.77e-14!33;CL:0000404!6.77e-14!33;CL:0002319!1.02e-10!43;CL:0000393!2.37e-10!39;CL:0000211!2.37e-10!39;CL:0000221!2.94e-10!44;CL:0000133!2.94e-10!44;CL:0000055!6.17e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.86e-17,23;CL:0000337,2.86e-17,23;CL:0000540,5.12e-11,33;CL:0000047,5.12e-11,33;CL:0000031,5.12e-11,33;CL:0000404,5.12e-11,33;CL:0000393,8.04e-09,39;CL:0000211,8.04e-09,39;CL:0002319,1.05e-07,43;CL:0000221,1.85e-07,44;CL:0000133,1.85e-07,44;CL:0002612,2.52e-07,3;CL:0002610,5.86e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.21e-30!73;UBERON:0005743!8.21e-30!73;UBERON:0000073!2.08e-29!75;UBERON:0001016!2.08e-29!75;UBERON:0001049!1.35e-26!52;UBERON:0005068!1.35e-26!52;UBERON:0006241!1.35e-26!52;UBERON:0007135!1.35e-26!52;UBERON:0000955!7.99e-25!50;UBERON:0006238!7.99e-25!50;UBERON:0000033!1.63e-24!63;UBERON:0004121!2.07e-24!102;UBERON:0000924!2.07e-24!102;UBERON:0006601!2.07e-24!102;UBERON:0002616!2.17e-24!49;UBERON:0002020!3.56e-24!34;UBERON:0002346!1.71e-23!71;UBERON:0003075!1.71e-23!71;UBERON:0007284!1.71e-23!71;UBERON:0003056!3.63e-21!49;UBERON:0002791!2.18e-20!29;UBERON:0003528!2.18e-20!29;UBERON:0001893!2.18e-20!29;UBERON:0003080!7.73e-20!40;UBERON:0002780!5.79e-19!39;UBERON:0001890!5.79e-19!39;UBERON:0006240!5.79e-19!39;UBERON:0000956!8.19e-16!21;UBERON:0001869!8.19e-16!21;UBERON:0000203!8.19e-16!21;UBERON:0007811!2.23e-13!86;UBERON:0000153!8.12e-13!94;UBERON:0002619!1.34e-12!17;UBERON:0002021!3.74e-11!10;UBERON:0000411!3.74e-11!10;UBERON:0001950!3.74e-11!10;UBERON:0003076!2.93e-07!12;UBERON:0003057!2.93e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.94e-48,54;UBERON:0001049,3.54e-44,52;UBERON:0005068,3.54e-44,52;UBERON:0006241,3.54e-44,52;UBERON:0007135,3.54e-44,52;UBERON:0002020,8.84e-40,34;UBERON:0002616,1.64e-38,46;UBERON:0001017,5.82e-38,73;UBERON:0000955,1.53e-37,47;UBERON:0006238,1.53e-37,47;UBERON:0001016,9.70e-37,75;UBERON:0003528,1.15e-36,29;UBERON:0002791,1.15e-36,29;UBERON:0001893,1.15e-36,29;UBERON:0002346,1.76e-34,64;UBERON:0003075,1.76e-34,64;UBERON:0007284,1.76e-34,64;UBERON:0003080,6.41e-33,40;UBERON:0002780,4.27e-31,39;UBERON:0001890,4.27e-31,39;UBERON:0006240,4.27e-31,39;UBERON:0010371,2.69e-29,73;UBERON:0004121,2.42e-27,95;UBERON:0000924,2.42e-27,95;UBERON:0006601,2.42e-27,95;UBERON:0000956,9.71e-26,21;UBERON:0001869,9.71e-26,21;UBERON:0000203,9.71e-26,21;UBERON:0003056,1.04e-25,49;UBERON:0002021,4.45e-23,10;UBERON:0000411,4.45e-23,10;UBERON:0001950,4.45e-23,10;UBERON:0002619,1.04e-21,17;UBERON:0010314,1.13e-21,92;UBERON:0000025,5.13e-16,114;UBERON:0004111,1.83e-14,122;UBERON:0002420,9.95e-12,8;UBERON:0007245,9.95e-12,8;UBERON:0010009,9.95e-12,8;UBERON:0010011,9.95e-12,8;UBERON:0000454,9.95e-12,8;UBERON:0003076,5.70e-11,12;UBERON:0003057,5.70e-11,12;UBERON:0000369,4.52e-10,5;UBERON:0002435,4.52e-10,5;UBERON:0000204,4.52e-10,5;UBERON:0010082,4.52e-10,5;UBERON:0011216,2.97e-09,194;UBERON:0000483,7.52e-08,174;UBERON:0000119,1.13e-07,176;UBERON:0002257,2.52e-07,3;UBERON:0004684,5.86e-07,3;UBERON:0002275,5.86e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.945041568321835,1.89292465216244,0.571301968807607,0.441737081903227,1.71487118900936,0.575072826109418,0.919218786610021,2.20231761998777,1.53224805702225,1.38245879930619,1.45074916503213,1.28082701043374,1.04182674111352,1.3959149950069,0,1.68078072554491,2.06240009831567,2.70506193518296,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,3.22058876712702,4.1889341362691,0,0,0,0.127070227073065,2.09706895166752,1.37250180845588,2.26177833803156,4.17178368461463,2.55715457330331,2.28566849015516,1.94689515681309,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.340182495756639,0.512454881139399,0.374806898238915,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.73376933133365,4.42489833230923,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.28932855251423,0,0,0.315508219416257,0,0,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,6.44455331110048,5.72895513439397,1.20297227640581,2.05524755931193,5.2877572817279,4.72515750162264,2.70192721934532,2.26571204492102,4.65984280576638,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.367687016900028,0.888986911206461,0.824140228955577,0,0.505394423527595,0.50695859978048,0.754505365544305,0.842773567228942,0.320125762024346,0.689225627467359,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0,0.476872379894642,1.30811774969096,0.564656282491984,0.676916863133412,0.73171189149109,0,0.407412341537585,0.561142271657738,0.593175090620871,0.591026894253381,0.818462086339379,0.464810523557898,0,0.999242311751784,1.16965804222704,0,0,0,0.231867835620421|short_description=p5@Jakmip2}} | ||
|EntrezGene=76217 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=D3YXK0 | |||
|association_with_transcript=101bp_to_ENSMUST00000082254,NM_001163637,uc008euk.2_5end | |||
|description=CAGE_peak_5_at_Jakmip2_5end | |||
|id=chr18:43847313..43847325,- | |||
|ontology_enrichment_celltype=CL:0000117!2.89e-16!23;CL:0000337!2.89e-16!23;CL:0000540!6.77e-14!33;CL:0000047!6.77e-14!33;CL:0000031!6.77e-14!33;CL:0000404!6.77e-14!33;CL:0002319!1.02e-10!43;CL:0000393!2.37e-10!39;CL:0000211!2.37e-10!39;CL:0000221!2.94e-10!44;CL:0000133!2.94e-10!44;CL:0000055!6.17e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.86e-17,23;CL:0000337,2.86e-17,23;CL:0000540,5.12e-11,33;CL:0000047,5.12e-11,33;CL:0000031,5.12e-11,33;CL:0000404,5.12e-11,33;CL:0000393,8.04e-09,39;CL:0000211,8.04e-09,39;CL:0002319,1.05e-07,43;CL:0000221,1.85e-07,44;CL:0000133,1.85e-07,44;CL:0002612,2.52e-07,3;CL:0002610,5.86e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.21e-30!73;UBERON:0005743!8.21e-30!73;UBERON:0000073!2.08e-29!75;UBERON:0001016!2.08e-29!75;UBERON:0001049!1.35e-26!52;UBERON:0005068!1.35e-26!52;UBERON:0006241!1.35e-26!52;UBERON:0007135!1.35e-26!52;UBERON:0000955!7.99e-25!50;UBERON:0006238!7.99e-25!50;UBERON:0000033!1.63e-24!63;UBERON:0004121!2.07e-24!102;UBERON:0000924!2.07e-24!102;UBERON:0006601!2.07e-24!102;UBERON:0002616!2.17e-24!49;UBERON:0002020!3.56e-24!34;UBERON:0002346!1.71e-23!71;UBERON:0003075!1.71e-23!71;UBERON:0007284!1.71e-23!71;UBERON:0003056!3.63e-21!49;UBERON:0002791!2.18e-20!29;UBERON:0003528!2.18e-20!29;UBERON:0001893!2.18e-20!29;UBERON:0003080!7.73e-20!40;UBERON:0002780!5.79e-19!39;UBERON:0001890!5.79e-19!39;UBERON:0006240!5.79e-19!39;UBERON:0000956!8.19e-16!21;UBERON:0001869!8.19e-16!21;UBERON:0000203!8.19e-16!21;UBERON:0007811!2.23e-13!86;UBERON:0000153!8.12e-13!94;UBERON:0002619!1.34e-12!17;UBERON:0002021!3.74e-11!10;UBERON:0000411!3.74e-11!10;UBERON:0001950!3.74e-11!10;UBERON:0003076!2.93e-07!12;UBERON:0003057!2.93e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.94e-48,54;UBERON:0001049,3.54e-44,52;UBERON:0005068,3.54e-44,52;UBERON:0006241,3.54e-44,52;UBERON:0007135,3.54e-44,52;UBERON:0002020,8.84e-40,34;UBERON:0002616,1.64e-38,46;UBERON:0001017,5.82e-38,73;UBERON:0000955,1.53e-37,47;UBERON:0006238,1.53e-37,47;UBERON:0001016,9.70e-37,75;UBERON:0003528,1.15e-36,29;UBERON:0002791,1.15e-36,29;UBERON:0001893,1.15e-36,29;UBERON:0002346,1.76e-34,64;UBERON:0003075,1.76e-34,64;UBERON:0007284,1.76e-34,64;UBERON:0003080,6.41e-33,40;UBERON:0002780,4.27e-31,39;UBERON:0001890,4.27e-31,39;UBERON:0006240,4.27e-31,39;UBERON:0010371,2.69e-29,73;UBERON:0004121,2.42e-27,95;UBERON:0000924,2.42e-27,95;UBERON:0006601,2.42e-27,95;UBERON:0000956,9.71e-26,21;UBERON:0001869,9.71e-26,21;UBERON:0000203,9.71e-26,21;UBERON:0003056,1.04e-25,49;UBERON:0002021,4.45e-23,10;UBERON:0000411,4.45e-23,10;UBERON:0001950,4.45e-23,10;UBERON:0002619,1.04e-21,17;UBERON:0010314,1.13e-21,92;UBERON:0000025,5.13e-16,114;UBERON:0004111,1.83e-14,122;UBERON:0002420,9.95e-12,8;UBERON:0007245,9.95e-12,8;UBERON:0010009,9.95e-12,8;UBERON:0010011,9.95e-12,8;UBERON:0000454,9.95e-12,8;UBERON:0003076,5.70e-11,12;UBERON:0003057,5.70e-11,12;UBERON:0000369,4.52e-10,5;UBERON:0002435,4.52e-10,5;UBERON:0000204,4.52e-10,5;UBERON:0010082,4.52e-10,5;UBERON:0011216,2.97e-09,194;UBERON:0000483,7.52e-08,174;UBERON:0000119,1.13e-07,176;UBERON:0002257,2.52e-07,3;UBERON:0004684,5.86e-07,3;UBERON:0002275,5.86e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.945041568321835,1.89292465216244,0.571301968807607,0.441737081903227,1.71487118900936,0.575072826109418,0.919218786610021,2.20231761998777,1.53224805702225,1.38245879930619,1.45074916503213,1.28082701043374,1.04182674111352,1.3959149950069,0,1.68078072554491,2.06240009831567,2.70506193518296,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,3.22058876712702,4.1889341362691,0,0,0,0.127070227073065,2.09706895166752,1.37250180845588,2.26177833803156,4.17178368461463,2.55715457330331,2.28566849015516,1.94689515681309,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.340182495756639,0.512454881139399,0.374806898238915,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.73376933133365,4.42489833230923,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.28932855251423,0,0,0.315508219416257,0,0,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,6.44455331110048,5.72895513439397,1.20297227640581,2.05524755931193,5.2877572817279,4.72515750162264,2.70192721934532,2.26571204492102,4.65984280576638,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.367687016900028,0.888986911206461,0.824140228955577,0,0.505394423527595,0.50695859978048,0.754505365544305,0.842773567228942,0.320125762024346,0.689225627467359,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0,0.476872379894642,1.30811774969096,0.564656282491984,0.676916863133412,0.73171189149109,0,0.407412341537585,0.561142271657738,0.593175090620871,0.591026894253381,0.818462086339379,0.464810523557898,0,0.999242311751784,1.16965804222704,0,0,0,0.231867835620421 | |||
|short_description=p5@Jakmip2 | |||
}} |
Revision as of 16:13, 13 September 2013
Short description: | p5@Jakmip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Jakmip2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 101bp_to_ENSMUST00000082254, NM_001163637, uc008euk.2_5end |
EntrezGene: | Jakmip2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.86e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.86e-17 | 23 |
neuron | 5.12e-11 | 33 |
neuronal stem cell | 5.12e-11 | 33 |
neuroblast | 5.12e-11 | 33 |
electrically signaling cell | 5.12e-11 | 33 |
electrically responsive cell | 8.04e-09 | 39 |
electrically active cell | 8.04e-09 | 39 |
neural cell | 1.05e-07 | 43 |
ectodermal cell | 1.85e-07 | 44 |
neurectodermal cell | 1.85e-07 | 44 |
neuron of the ventral spinal cord | 2.52e-07 | 3 |
raphe nuclei neuron | 5.86e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.