FFCP PHASE1:Mm9::chr18:15562013..15562040,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=664|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:15562013..15562040,-|id=chr18:15562013..15562040,-|ontology_enrichment_celltype=CL:0002453!1.48e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,1.40e-11,43;CL:0000221,3.11e-11,44;CL:0000133,3.11e-11,44;CL:0002453,2.03e-10,8;CL:0000117,1.61e-09,23;CL:0000337,1.61e-09,23;CL:0002614,7.30e-09,3;CL:0000333,3.35e-08,10;CL:0000095,3.35e-08,10;CL:0000243,3.35e-08,10;CL:0000123,3.35e-08,10;CL:0000125,3.35e-08,10;CL:0000030,3.35e-08,10;CL:0000339,3.35e-08,10;CL:0002610,7.16e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.56e-22!73;UBERON:0005743!2.56e-22!73;UBERON:0001049!1.41e-21!52;UBERON:0005068!1.41e-21!52;UBERON:0006241!1.41e-21!52;UBERON:0007135!1.41e-21!52;UBERON:0000073!2.36e-21!75;UBERON:0001016!2.36e-21!75;UBERON:0000955!2.69e-19!50;UBERON:0006238!2.69e-19!50;UBERON:0000033!1.98e-18!63;UBERON:0002616!2.01e-18!49;UBERON:0002346!9.30e-17!71;UBERON:0003075!9.30e-17!71;UBERON:0007284!9.30e-17!71;UBERON:0002020!1.76e-16!34;UBERON:0004121!2.45e-16!102;UBERON:0000924!2.45e-16!102;UBERON:0006601!2.45e-16!102;UBERON:0003076!1.11e-12!12;UBERON:0003057!1.11e-12!12;UBERON:0003056!1.01e-11!49;UBERON:0002791!1.26e-11!29;UBERON:0003528!1.26e-11!29;UBERON:0001893!1.26e-11!29;UBERON:0003080!1.90e-11!40;UBERON:0002780!1.58e-10!39;UBERON:0001890!1.58e-10!39;UBERON:0006240!1.58e-10!39;UBERON:0007811!1.82e-10!86;UBERON:0002619!5.15e-10!17;UBERON:0002021!3.24e-09!10;UBERON:0000411!3.24e-09!10;UBERON:0001950!3.24e-09!10;UBERON:0002298!3.83e-09!6;UBERON:0000956!8.10e-09!21;UBERON:0001869!8.10e-09!21;UBERON:0000203!8.10e-09!21;UBERON:0000153!1.12e-08!94;UBERON:0002240!2.56e-08!6;UBERON:0005174!2.56e-08!6;UBERON:0001137!2.56e-08!6;UBERON:0001948!5.26e-07!5;UBERON:0002315!5.26e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.62e-38,73;UBERON:0001016,5.74e-37,75;UBERON:0000073,1.11e-35,54;UBERON:0001049,3.21e-32,52;UBERON:0005068,3.21e-32,52;UBERON:0006241,3.21e-32,52;UBERON:0007135,3.21e-32,52;UBERON:0004121,1.72e-29,95;UBERON:0000924,1.72e-29,95;UBERON:0006601,1.72e-29,95;UBERON:0002346,6.06e-27,64;UBERON:0003075,6.06e-27,64;UBERON:0007284,6.06e-27,64;UBERON:0000955,6.97e-25,47;UBERON:0006238,6.97e-25,47;UBERON:0002616,2.22e-23,46;UBERON:0010371,7.79e-23,73;UBERON:0002020,7.88e-22,34;UBERON:0003076,2.28e-20,12;UBERON:0003057,2.28e-20,12;UBERON:0010314,8.50e-17,92;UBERON:0003080,9.34e-16,40;UBERON:0003528,2.57e-15,29;UBERON:0002791,2.57e-15,29;UBERON:0001893,2.57e-15,29;UBERON:0002780,3.58e-14,39;UBERON:0001890,3.58e-14,39;UBERON:0006240,3.58e-14,39;UBERON:0003056,1.40e-13,49;UBERON:0002021,1.74e-13,10;UBERON:0000411,1.74e-13,10;UBERON:0001950,1.74e-13,10;UBERON:0002619,9.83e-12,17;UBERON:0002950,2.61e-11,4;UBERON:0001891,2.61e-11,4;UBERON:0009616,2.61e-11,4;UBERON:0010286,2.61e-11,4;UBERON:0000025,2.72e-11,114;UBERON:0002240,3.03e-11,6;UBERON:0005174,3.03e-11,6;UBERON:0001137,3.03e-11,6;UBERON:0000956,3.77e-11,21;UBERON:0001869,3.77e-11,21;UBERON:0000203,3.77e-11,21;UBERON:0004733,1.25e-10,6;UBERON:0004732,1.25e-10,6;UBERON:0002028,1.25e-10,6;UBERON:0007277,1.25e-10,6;UBERON:0004111,3.84e-10,122;UBERON:0011216,6.07e-10,194;UBERON:0002038,7.30e-09,3;UBERON:0009663,7.30e-09,3;UBERON:0009661,7.30e-09,3;UBERON:0000125,7.30e-09,3;UBERON:0002308,7.30e-09,3;UBERON:0001948,8.16e-09,5;UBERON:0002315,8.16e-09,5;UBERON:0004684,7.16e-08,3;UBERON:0002275,7.16e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.659058548203415,1.94429899074283,4.05960622713551,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69640099466564,11.9107674649682,0,0,0,6.56997264128748,4.63823935998388,0,0,0,2.20231761998777,3.57524546638526,3.5329502648936,0,0,0,4.74611098302348,5.06486349028512,6.1119299110724,4.12480019663135,4.12877874317399,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,4.9772735491963,3.35114730901528,0,0,0,0,5.54225365797844,3.20250421973039,0.251308704225729,2.60736480288415,0.767146371990992,6.44142938134636,3.56930778749067,0,0.124406970610093,0,1.05220927943237,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,3.57492912559016,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4357883492065,4.92289083687253,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86073617438886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,3.95326289831947,0.920650473014354,1.71868654031819,1.71853182343688,2.05524755931193,1.5107877947794,2.70009000092722,0,3.17199686288943,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0.882365676478062,0.695603506861264|short_description=p@chr18:15562013..15562040,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=664 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:15562013..15562040,- | |||
|id=chr18:15562013..15562040,- | |||
|ontology_enrichment_celltype=CL:0002453!1.48e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.40e-11,43;CL:0000221,3.11e-11,44;CL:0000133,3.11e-11,44;CL:0002453,2.03e-10,8;CL:0000117,1.61e-09,23;CL:0000337,1.61e-09,23;CL:0002614,7.30e-09,3;CL:0000333,3.35e-08,10;CL:0000095,3.35e-08,10;CL:0000243,3.35e-08,10;CL:0000123,3.35e-08,10;CL:0000125,3.35e-08,10;CL:0000030,3.35e-08,10;CL:0000339,3.35e-08,10;CL:0002610,7.16e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.56e-22!73;UBERON:0005743!2.56e-22!73;UBERON:0001049!1.41e-21!52;UBERON:0005068!1.41e-21!52;UBERON:0006241!1.41e-21!52;UBERON:0007135!1.41e-21!52;UBERON:0000073!2.36e-21!75;UBERON:0001016!2.36e-21!75;UBERON:0000955!2.69e-19!50;UBERON:0006238!2.69e-19!50;UBERON:0000033!1.98e-18!63;UBERON:0002616!2.01e-18!49;UBERON:0002346!9.30e-17!71;UBERON:0003075!9.30e-17!71;UBERON:0007284!9.30e-17!71;UBERON:0002020!1.76e-16!34;UBERON:0004121!2.45e-16!102;UBERON:0000924!2.45e-16!102;UBERON:0006601!2.45e-16!102;UBERON:0003076!1.11e-12!12;UBERON:0003057!1.11e-12!12;UBERON:0003056!1.01e-11!49;UBERON:0002791!1.26e-11!29;UBERON:0003528!1.26e-11!29;UBERON:0001893!1.26e-11!29;UBERON:0003080!1.90e-11!40;UBERON:0002780!1.58e-10!39;UBERON:0001890!1.58e-10!39;UBERON:0006240!1.58e-10!39;UBERON:0007811!1.82e-10!86;UBERON:0002619!5.15e-10!17;UBERON:0002021!3.24e-09!10;UBERON:0000411!3.24e-09!10;UBERON:0001950!3.24e-09!10;UBERON:0002298!3.83e-09!6;UBERON:0000956!8.10e-09!21;UBERON:0001869!8.10e-09!21;UBERON:0000203!8.10e-09!21;UBERON:0000153!1.12e-08!94;UBERON:0002240!2.56e-08!6;UBERON:0005174!2.56e-08!6;UBERON:0001137!2.56e-08!6;UBERON:0001948!5.26e-07!5;UBERON:0002315!5.26e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.62e-38,73;UBERON:0001016,5.74e-37,75;UBERON:0000073,1.11e-35,54;UBERON:0001049,3.21e-32,52;UBERON:0005068,3.21e-32,52;UBERON:0006241,3.21e-32,52;UBERON:0007135,3.21e-32,52;UBERON:0004121,1.72e-29,95;UBERON:0000924,1.72e-29,95;UBERON:0006601,1.72e-29,95;UBERON:0002346,6.06e-27,64;UBERON:0003075,6.06e-27,64;UBERON:0007284,6.06e-27,64;UBERON:0000955,6.97e-25,47;UBERON:0006238,6.97e-25,47;UBERON:0002616,2.22e-23,46;UBERON:0010371,7.79e-23,73;UBERON:0002020,7.88e-22,34;UBERON:0003076,2.28e-20,12;UBERON:0003057,2.28e-20,12;UBERON:0010314,8.50e-17,92;UBERON:0003080,9.34e-16,40;UBERON:0003528,2.57e-15,29;UBERON:0002791,2.57e-15,29;UBERON:0001893,2.57e-15,29;UBERON:0002780,3.58e-14,39;UBERON:0001890,3.58e-14,39;UBERON:0006240,3.58e-14,39;UBERON:0003056,1.40e-13,49;UBERON:0002021,1.74e-13,10;UBERON:0000411,1.74e-13,10;UBERON:0001950,1.74e-13,10;UBERON:0002619,9.83e-12,17;UBERON:0002950,2.61e-11,4;UBERON:0001891,2.61e-11,4;UBERON:0009616,2.61e-11,4;UBERON:0010286,2.61e-11,4;UBERON:0000025,2.72e-11,114;UBERON:0002240,3.03e-11,6;UBERON:0005174,3.03e-11,6;UBERON:0001137,3.03e-11,6;UBERON:0000956,3.77e-11,21;UBERON:0001869,3.77e-11,21;UBERON:0000203,3.77e-11,21;UBERON:0004733,1.25e-10,6;UBERON:0004732,1.25e-10,6;UBERON:0002028,1.25e-10,6;UBERON:0007277,1.25e-10,6;UBERON:0004111,3.84e-10,122;UBERON:0011216,6.07e-10,194;UBERON:0002038,7.30e-09,3;UBERON:0009663,7.30e-09,3;UBERON:0009661,7.30e-09,3;UBERON:0000125,7.30e-09,3;UBERON:0002308,7.30e-09,3;UBERON:0001948,8.16e-09,5;UBERON:0002315,8.16e-09,5;UBERON:0004684,7.16e-08,3;UBERON:0002275,7.16e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.659058548203415,1.94429899074283,4.05960622713551,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69640099466564,11.9107674649682,0,0,0,6.56997264128748,4.63823935998388,0,0,0,2.20231761998777,3.57524546638526,3.5329502648936,0,0,0,4.74611098302348,5.06486349028512,6.1119299110724,4.12480019663135,4.12877874317399,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,4.9772735491963,3.35114730901528,0,0,0,0,5.54225365797844,3.20250421973039,0.251308704225729,2.60736480288415,0.767146371990992,6.44142938134636,3.56930778749067,0,0.124406970610093,0,1.05220927943237,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,3.57492912559016,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4357883492065,4.92289083687253,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86073617438886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,3.95326289831947,0.920650473014354,1.71868654031819,1.71853182343688,2.05524755931193,1.5107877947794,2.70009000092722,0,3.17199686288943,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0.882365676478062,0.695603506861264 | |||
|short_description=p@chr18:15562013..15562040,- | |||
}} |
Revision as of 15:44, 13 September 2013
Short description: | p@chr18:15562013..15562040, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:15562013..15562040, - |
Coexpression cluster: | MCL_coexpression_mm9:664 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.40e-11 | 43 |
ectodermal cell | 3.11e-11 | 44 |
neurectodermal cell | 3.11e-11 | 44 |
oligodendrocyte precursor cell | 2.03e-10 | 8 |
CNS neuron (sensu Vertebrata) | 1.61e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-09 | 23 |
neuron of the substantia nigra | 7.30e-09 | 3 |
migratory neural crest cell | 3.35e-08 | 10 |
neuron associated cell | 3.35e-08 | 10 |
glial cell (sensu Vertebrata) | 3.35e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.35e-08 | 10 |
glial cell | 3.35e-08 | 10 |
glioblast | 3.35e-08 | 10 |
glioblast (sensu Vertebrata) | 3.35e-08 | 10 |
raphe nuclei neuron | 7.16e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.