FFCP PHASE1:Mm9::chr17:95264277..95264286,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:95264277..95264286,+|id=chr17:95264277..95264286,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,1.76e-25,3;CL:0000239,1.10e-12,6;CL:0000677,1.10e-12,6;CL:0000584,1.10e-12,6;CL:0000066,1.31e-11,25;CL:0000473,2.65e-11,7;CL:0000075,5.82e-11,7;CL:0002563,1.18e-08,9;CL:0002251,1.18e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.50e-19,15;UBERON:0001962,1.19e-16,2;UBERON:0001961,1.19e-16,2;UBERON:0001744,1.19e-16,2;UBERON:0004923,1.04e-11,24;UBERON:0002465,1.97e-11,3;UBERON:0001242,4.30e-10,13;UBERON:0001262,4.30e-10,13;UBERON:0004786,4.30e-10,13;UBERON:0003199,4.39e-09,1;UBERON:0001153,5.27e-09,1;UBERON:0001045,5.27e-09,1;UBERON:0003350,1.18e-08,9;UBERON:0004808,1.18e-08,9;UBERON:0001277,1.18e-08,9;UBERON:0000485,3.54e-07,11|phase1_expression=0.640595388419176,4.88565570695105,3.63999391511629,0,0.500895729946347,0.839396359559449,2.56973904655078,0,0.140788722151667,0,0.171217968225505,0,0.342401459862411,0.0874204024189974,0,0,0,0,0,0,0,0.595745707205312,0.522399578277871,3.51983330145495,2.52350209173887,5.7423196411502,3.87685796543167,6.46413698057667,0,0,0.665191531965914,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0,0.985903938436763,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0.373220911830279,3.79084137650512,0.420883711772948,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0.36012412292203,0.473489471170421,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0.193952487167626,0,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.538192240565737,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.983609672260053,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0,0.283880170416537,0,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0,0.0826534557253359,0,0,0.621339313086926,0.56369293868419,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0.443068581523732,0.201932899896295,0.304827226619999,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0,0.167884616364078,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421|short_description=p@chr17:95264277..95264286,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:95264277..95264286,+ | |||
|id=chr17:95264277..95264286,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.76e-25,3;CL:0000239,1.10e-12,6;CL:0000677,1.10e-12,6;CL:0000584,1.10e-12,6;CL:0000066,1.31e-11,25;CL:0000473,2.65e-11,7;CL:0000075,5.82e-11,7;CL:0002563,1.18e-08,9;CL:0002251,1.18e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.50e-19,15;UBERON:0001962,1.19e-16,2;UBERON:0001961,1.19e-16,2;UBERON:0001744,1.19e-16,2;UBERON:0004923,1.04e-11,24;UBERON:0002465,1.97e-11,3;UBERON:0001242,4.30e-10,13;UBERON:0001262,4.30e-10,13;UBERON:0004786,4.30e-10,13;UBERON:0003199,4.39e-09,1;UBERON:0001153,5.27e-09,1;UBERON:0001045,5.27e-09,1;UBERON:0003350,1.18e-08,9;UBERON:0004808,1.18e-08,9;UBERON:0001277,1.18e-08,9;UBERON:0000485,3.54e-07,11 | |||
|phase1_expression=0.640595388419176,4.88565570695105,3.63999391511629,0,0.500895729946347,0.839396359559449,2.56973904655078,0,0.140788722151667,0,0.171217968225505,0,0.342401459862411,0.0874204024189974,0,0,0,0,0,0,0,0.595745707205312,0.522399578277871,3.51983330145495,2.52350209173887,5.7423196411502,3.87685796543167,6.46413698057667,0,0,0.665191531965914,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0,0.985903938436763,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0,0,0.373220911830279,3.79084137650512,0.420883711772948,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0.36012412292203,0.473489471170421,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0.193952487167626,0,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.538192240565737,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.983609672260053,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0,0.283880170416537,0,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0,0.0826534557253359,0,0,0.621339313086926,0.56369293868419,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0.443068581523732,0.201932899896295,0.304827226619999,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0,0.167884616364078,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr17:95264277..95264286,+ | |||
}} |
Revision as of 15:40, 13 September 2013
Short description: | p@chr17:95264277..95264286, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:95264277..95264286, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.76e-25 | 3 |
brush border epithelial cell | 1.10e-12 | 6 |
gut absorptive cell | 1.10e-12 | 6 |
enterocyte | 1.10e-12 | 6 |
epithelial cell | 1.31e-11 | 25 |
defensive cell | 2.65e-11 | 7 |
columnar/cuboidal epithelial cell | 5.82e-11 | 7 |
intestinal epithelial cell | 1.18e-08 | 9 |
epithelial cell of alimentary canal | 1.18e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.50e-19 | 15 |
gut-associated lymphoid tissue | 1.19e-16 | 2 |
mucosa-associated lymphoid tissue | 1.19e-16 | 2 |
lymphoid tissue | 1.19e-16 | 2 |
organ component layer | 1.04e-11 | 24 |
lymphoid system | 1.97e-11 | 3 |
intestinal mucosa | 4.30e-10 | 13 |
wall of intestine | 4.30e-10 | 13 |
gastrointestinal system mucosa | 4.30e-10 | 13 |
egg chamber | 4.39e-09 | 1 |
caecum | 5.27e-09 | 1 |
midgut | 5.27e-09 | 1 |
epithelium of mucosa | 1.18e-08 | 9 |
gastrointestinal system epithelium | 1.18e-08 | 9 |
intestinal epithelium | 1.18e-08 | 9 |
simple columnar epithelium | 3.54e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.