FFCP PHASE1:Hg19::chr5:32711858..32711881,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4883|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7945|TSSclassifier=S|UniProt=|association_with_transcript=29bp_to_ENST00000415167_5end|description=CAGE_peak_4_at_NPR3_5end|id=chr5:32711858..32711881,+|ontology_enrichment_celltype=CL:0000055!6.17e-22!180;CL:0000057!1.15e-11!75;CL:0000680!5.46e-11!57;CL:0000056!5.46e-11!57;CL:0000355!5.46e-11!57;CL:0000187!1.76e-09!54;CL:0000183!1.17e-08!59;CL:0000393!1.46e-08!60;CL:0000211!1.46e-08!60;CL:0002620!5.25e-08!23|ontology_enrichment_celltype_v019=CL:0000136;8.65e-08;13!CL:0002620;8.85e-07;23|ontology_enrichment_celltype_v019_2=CL:0000057,5.50e-10,76;CL:0000680,1.19e-09,58;CL:0000056,1.19e-09,58;CL:0000355,1.19e-09,58;CL:0000034,4.51e-08,441;CL:0000136,8.21e-08,15;CL:0000187,9.57e-08,55;CL:0000048,2.30e-07,427;CL:0000393,5.17e-07,61;CL:0000211,5.17e-07,61;CL:0000723,6.23e-07,433;CL:0002620,8.83e-07,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!8.28e-12!83;UBERON:0002329!8.28e-12!83;UBERON:0003077!8.28e-12!83;UBERON:0003059!8.28e-12!83;UBERON:0007282!8.28e-12!83;UBERON:0009618!8.28e-12!83;UBERON:0007285!8.28e-12!83;UBERON:0002385!4.80e-11!63;UBERON:0001015!4.80e-11!63;UBERON:0000383!4.80e-11!63;UBERON:0001134!1.13e-10!61;UBERON:0002036!1.13e-10!61;UBERON:0003082!1.13e-10!61;UBERON:0004290!1.56e-10!70;UBERON:0000486!3.94e-08!82;UBERON:0002100!1.81e-07!216|ontology_enrichment_uberon_v019=UBERON:0004457;7.84e-09;9!UBERON:0000042;7.84e-09;9!UBERON:0004905;8.20e-09;8!UBERON:0000982;8.20e-09;8!UBERON:0004770;8.20e-09;8!UBERON:0011135;4.30e-08;5!UBERON:0002216;4.30e-08;5!UBERON:0011134;4.30e-08;5!UBERON:0002209;4.30e-08;5!UBERON:0002213;4.30e-08;5!UBERON:0007844;4.30e-08;5!UBERON:0011138;4.30e-08;5!UBERON:0001130;4.30e-08;5!UBERON:0001066;4.30e-08;5!UBERON:0001468;4.30e-08;5!UBERON:0003688;6.08e-08;6!UBERON:0002358;6.08e-08;6!UBERON:0003684;6.08e-08;6!UBERON:0001178;6.08e-08;6!UBERON:0004765;2.38e-07;26|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.63e-09,62;UBERON:0002036,2.63e-09,62;UBERON:0003082,2.63e-09,62;UBERON:0004905,7.61e-09,8;UBERON:0000982,7.61e-09,8;UBERON:0004770,7.61e-09,8;UBERON:0002385,9.02e-09,64;UBERON:0001015,9.02e-09,64;UBERON:0000383,9.02e-09,64;UBERON:0011135,4.20e-08,5;UBERON:0002216,4.20e-08,5;UBERON:0011134,4.20e-08,5;UBERON:0002209,4.20e-08,5;UBERON:0002213,4.20e-08,5;UBERON:0005856,4.20e-08,5;UBERON:0005866,4.20e-08,5;UBERON:0005863,4.20e-08,5;UBERON:0007844,4.20e-08,5;UBERON:0011138,4.20e-08,5;UBERON:0001130,4.20e-08,5;UBERON:0001066,4.20e-08,5;UBERON:0001468,4.20e-08,5;UBERON:0004457,5.51e-08,12;UBERON:0000042,5.51e-08,12;UBERON:0003688,7.70e-08,6;UBERON:0002358,7.70e-08,6;UBERON:0003684,7.70e-08,6;UBERON:0001178,7.70e-08,6;UBERON:0007524,1.46e-07,73;UBERON:0002329,3.62e-07,71;UBERON:0003059,3.62e-07,71;UBERON:0007282,3.62e-07,71;UBERON:0004290,3.62e-07,71;UBERON:0009618,3.62e-07,71;UBERON:0003077,5.74e-07,72;UBERON:0007285,5.74e-07,72|phase1_expression=7.63049192936338,5.78071414505655,5.07435854745496,5.00366491765652,4.46961094427288,10.4680622892044,0,0,0,0.245733936501509,0,0,0,6.31208400096238,9.94192127183747,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,1.25542639594803,0,0,0,0.786728553697808,0,0,0,0,0,0,0.142169232487422,48.1504720509149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.8685314316103,22.980851082243,20.8073426972311,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,3.06870148424473,2.1686349143074,5.51471701699479,3.18662341713812,0.795285947051099,1.94653948121054,0.378139268656271,0.221729397462564,0.614843499851882,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,4.05217637326655,1.05927344650575,12.0471380714502,3.19201543978521,2.24271040056923,0,2.22000793575444,0,0.134710672069688,0,2.11900398702904,3.45705554687999,0,0.312160076830321,0,0.597794722207204,0.117434498643765,0.323745888736263,0.280901613404497,1.02077085627447,0,0.413303124703062,0,0.989067717114227,0,0.718618141816238,0,0.500474079487857,0.277064115484183,0.877955241761676,1.83892677479412,3.45547535485173,0,2.33206526395521,0.85422955527427,2.7551147150743,3.90118424909723,3.09157587715317,2.31876486041066,1.48893485065272,8.94514560878711,7.50264939741229,1.26216887122057,2.39329736469978,2.58633690910099,5.68015348026583,3.32481924151213,0.67824236924195,0,0,0,0.365921118388786,0,0.116193942869518,1.45125477021519,0,0,0,0.643240938192885,0,4.17931135228781,1.44375896333917,0.591534000199219,0.505754070234305,0.241011029883482,0.110293972732394,0.435758888184812,0.71181185733329,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,1.29149563659404,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4883 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7945 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENST00000415167_5end | |||
|description=CAGE_peak_4_at_NPR3_5end | |||
|id=chr5:32711858..32711881,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.17e-22!180;CL:0000057!1.15e-11!75;CL:0000680!5.46e-11!57;CL:0000056!5.46e-11!57;CL:0000355!5.46e-11!57;CL:0000187!1.76e-09!54;CL:0000183!1.17e-08!59;CL:0000393!1.46e-08!60;CL:0000211!1.46e-08!60;CL:0002620!5.25e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.65e-08;13!CL:0002620;8.85e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.50e-10,76;CL:0000680,1.19e-09,58;CL:0000056,1.19e-09,58;CL:0000355,1.19e-09,58;CL:0000034,4.51e-08,441;CL:0000136,8.21e-08,15;CL:0000187,9.57e-08,55;CL:0000048,2.30e-07,427;CL:0000393,5.17e-07,61;CL:0000211,5.17e-07,61;CL:0000723,6.23e-07,433;CL:0002620,8.83e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.28e-12!83;UBERON:0002329!8.28e-12!83;UBERON:0003077!8.28e-12!83;UBERON:0003059!8.28e-12!83;UBERON:0007282!8.28e-12!83;UBERON:0009618!8.28e-12!83;UBERON:0007285!8.28e-12!83;UBERON:0002385!4.80e-11!63;UBERON:0001015!4.80e-11!63;UBERON:0000383!4.80e-11!63;UBERON:0001134!1.13e-10!61;UBERON:0002036!1.13e-10!61;UBERON:0003082!1.13e-10!61;UBERON:0004290!1.56e-10!70;UBERON:0000486!3.94e-08!82;UBERON:0002100!1.81e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.84e-09;9!UBERON:0000042;7.84e-09;9!UBERON:0004905;8.20e-09;8!UBERON:0000982;8.20e-09;8!UBERON:0004770;8.20e-09;8!UBERON:0011135;4.30e-08;5!UBERON:0002216;4.30e-08;5!UBERON:0011134;4.30e-08;5!UBERON:0002209;4.30e-08;5!UBERON:0002213;4.30e-08;5!UBERON:0007844;4.30e-08;5!UBERON:0011138;4.30e-08;5!UBERON:0001130;4.30e-08;5!UBERON:0001066;4.30e-08;5!UBERON:0001468;4.30e-08;5!UBERON:0003688;6.08e-08;6!UBERON:0002358;6.08e-08;6!UBERON:0003684;6.08e-08;6!UBERON:0001178;6.08e-08;6!UBERON:0004765;2.38e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.63e-09,62;UBERON:0002036,2.63e-09,62;UBERON:0003082,2.63e-09,62;UBERON:0004905,7.61e-09,8;UBERON:0000982,7.61e-09,8;UBERON:0004770,7.61e-09,8;UBERON:0002385,9.02e-09,64;UBERON:0001015,9.02e-09,64;UBERON:0000383,9.02e-09,64;UBERON:0011135,4.20e-08,5;UBERON:0002216,4.20e-08,5;UBERON:0011134,4.20e-08,5;UBERON:0002209,4.20e-08,5;UBERON:0002213,4.20e-08,5;UBERON:0005856,4.20e-08,5;UBERON:0005866,4.20e-08,5;UBERON:0005863,4.20e-08,5;UBERON:0007844,4.20e-08,5;UBERON:0011138,4.20e-08,5;UBERON:0001130,4.20e-08,5;UBERON:0001066,4.20e-08,5;UBERON:0001468,4.20e-08,5;UBERON:0004457,5.51e-08,12;UBERON:0000042,5.51e-08,12;UBERON:0003688,7.70e-08,6;UBERON:0002358,7.70e-08,6;UBERON:0003684,7.70e-08,6;UBERON:0001178,7.70e-08,6;UBERON:0007524,1.46e-07,73;UBERON:0002329,3.62e-07,71;UBERON:0003059,3.62e-07,71;UBERON:0007282,3.62e-07,71;UBERON:0004290,3.62e-07,71;UBERON:0009618,3.62e-07,71;UBERON:0003077,5.74e-07,72;UBERON:0007285,5.74e-07,72 | |||
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| |||
|short_description=p4@NPR3 | |||
}} |
Revision as of 15:26, 13 September 2013
Short description: | p4@NPR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NPR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000415167_5end |
EntrezGene: | NPR3 |
HGNC: | 7945 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.50e-10 | 76 |
muscle precursor cell | 1.19e-09 | 58 |
myoblast | 1.19e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.19e-09 | 58 |
stem cell | 4.51e-08 | 441 |
fat cell | 8.21e-08 | 15 |
muscle cell | 9.57e-08 | 55 |
multi fate stem cell | 2.30e-07 | 427 |
electrically responsive cell | 5.17e-07 | 61 |
electrically active cell | 5.17e-07 | 61 |
somatic stem cell | 6.23e-07 | 433 |
skin fibroblast | 8.83e-07 | 23 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.