FFCP PHASE1:Hg19::chr5:175084797..175084805,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3274|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5183|TSSclassifier=S|UniProt=P25021|association_with_transcript=-227bp_to_ENST00000377291_5end|coexpression_cluster_id=C4387|description=CAGE_peak_3_at_HRH2_5end|id=chr5:175084797..175084805,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;1.87e-22;4!UBERON:0007284;1.87e-22;4!UBERON:0004140;2.79e-11;1!UBERON:0010226;3.94e-11;1!UBERON:0010115;9.49e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.16e-20;2!DOID:178;9.49e-11;1!DOID:326;9.49e-11;1!DOID:3978;9.49e-11;1!DOID:3394;9.49e-11;1!DOID:5844;9.49e-11;1!DOID:1287;1.36e-10;4|ontology_enrichment_disease_v019_2=DOID:114,3.67e-20,2;DOID:178,1.10e-10,1;DOID:326,1.10e-10,1;DOID:3978,1.10e-10,1;DOID:3394,1.10e-10,1;DOID:5844,1.10e-10,1;DOID:1287,1.47e-10,4|ontology_enrichment_uberon=UBERON:0007023!4.07e-50!115;UBERON:0001049!1.35e-24!57;UBERON:0005068!1.35e-24!57;UBERON:0006241!1.35e-24!57;UBERON:0007135!1.35e-24!57;UBERON:0001017!2.46e-21!82;UBERON:0005743!7.87e-21!86;UBERON:0002780!2.66e-20!41;UBERON:0001890!2.66e-20!41;UBERON:0006240!2.66e-20!41;UBERON:0002020!3.81e-20!34;UBERON:0003528!3.81e-20!34;UBERON:0002616!4.27e-20!59;UBERON:0001893!6.58e-20!34;UBERON:0003075!1.06e-19!86;UBERON:0007284!1.06e-19!86;UBERON:0003080!1.27e-19!42;UBERON:0002346!2.74e-19!90;UBERON:0002791!7.99e-19!33;UBERON:0000955!8.40e-19!69;UBERON:0006238!8.40e-19!69;UBERON:0000073!1.02e-18!94;UBERON:0001016!1.02e-18!94;UBERON:0001869!5.57e-18!32;UBERON:0002619!2.77e-16!22;UBERON:0001950!8.46e-14!20;UBERON:0000956!8.63e-14!25;UBERON:0000203!8.63e-14!25;UBERON:0003056!5.78e-12!61;UBERON:0000924!1.51e-08!173;UBERON:0006601!1.51e-08!173;UBERON:0004121!1.58e-08!169;UBERON:0002420!1.95e-08!9;UBERON:0007245!1.95e-08!9;UBERON:0010009!1.95e-08!9;UBERON:0010011!1.95e-08!9;UBERON:0000454!1.95e-08!9;UBERON:0000349!2.97e-08!5;UBERON:0000153!4.14e-08!129;UBERON:0007811!4.14e-08!129;UBERON:0002298!4.74e-08!8;UBERON:0002308!5.45e-08!9;UBERON:0000125!5.45e-08!9;UBERON:0000033!7.74e-08!123;UBERON:0001871!1.89e-07!7;UBERON:0002390!9.57e-07!102;UBERON:0003061!9.57e-07!102;UBERON:0000200!9.74e-07!6|ontology_enrichment_uberon_v019=UBERON:0003978;1.05e-29;3!UBERON:0000946;1.05e-29;3!UBERON:0007100;7.64e-24;25!UBERON:0002133;2.61e-20;2!UBERON:0004151;4.01e-14;3!UBERON:0005383;1.70e-13;3!UBERON:0005382;1.70e-13;3!UBERON:0002791;1.13e-11;32!UBERON:0002134;2.53e-11;1!UBERON:0005208;2.53e-11;1!UBERON:0004145;2.53e-11;1!UBERON:0005946;2.53e-11;1!UBERON:0005965;2.53e-11;1!UBERON:0002078;2.53e-11;1!UBERON:0002146;3.40e-11;1!UBERON:0005623;3.40e-11;1!UBERON:0002084;3.94e-11;1!UBERON:0002082;3.94e-11;1!UBERON:0001950;4.39e-11;20!UBERON:0000948;5.49e-11;22!UBERON:0001869;5.52e-11;32!UBERON:0002363;9.49e-11;1!UBERON:0000029;9.49e-11;1!UBERON:0001874;9.49e-11;1!UBERON:0002135;9.49e-11;1!UBERON:0001893;1.14e-10;34!UBERON:0003528;1.14e-10;34!UBERON:0002020;1.14e-10;34!UBERON:0000369;2.36e-10;4!UBERON:0002435;2.36e-10;4!UBERON:0000204;2.36e-10;4!UBERON:0002619;4.14e-10;22!UBERON:0002420;5.62e-10;9!UBERON:0007245;5.62e-10;9!UBERON:0010009;5.62e-10;9!UBERON:0010011;5.62e-10;9!UBERON:0000454;5.62e-10;9!UBERON:0010313;2.53e-09;10!UBERON:0000956;6.29e-09;25!UBERON:0000203;6.29e-09;25!UBERON:0002780;2.13e-07;41!UBERON:0001890;2.13e-07;41!UBERON:0000200;3.46e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0003978,7.50e-30,3;UBERON:0009751,7.50e-30,3;UBERON:0000946,7.50e-30,3;UBERON:0002523,7.50e-30,3;UBERON:0005983,7.50e-30,3;UBERON:0002165,7.50e-30,3;UBERON:0002062,7.50e-30,3;UBERON:0007280,7.50e-30,3;UBERON:0007100,4.87e-22,27;UBERON:0002133,1.86e-20,2;UBERON:0007023,8.28e-19,114;UBERON:0004151,3.88e-14,3;UBERON:0005383,9.60e-14,3;UBERON:0005382,9.60e-14,3;UBERON:0002791,3.45e-13,32;UBERON:0001869,3.45e-13,32;UBERON:0004797,3.73e-13,7;UBERON:0003528,2.14e-12,34;UBERON:0002020,2.14e-12,34;UBERON:0001893,2.14e-12,34;UBERON:0002134,2.53e-11,1;UBERON:0005208,2.53e-11,1;UBERON:0005946,2.53e-11,1;UBERON:0005965,2.53e-11,1;UBERON:0002078,2.53e-11,1;UBERON:0002146,3.41e-11,1;UBERON:0005623,3.41e-11,1;UBERON:0002084,3.76e-11,1;UBERON:0002082,3.76e-11,1;UBERON:0010226,3.76e-11,1;UBERON:0001874,5.05e-11,1;UBERON:0000029,5.57e-11,1;UBERON:0001950,6.02e-11,20;UBERON:0002135,6.77e-11,1;UBERON:0002363,1.33e-10,1;UBERON:0007645,1.33e-10,1;UBERON:0007647,1.33e-10,1;UBERON:0010115,1.33e-10,1;UBERON:0000369,1.54e-10,4;UBERON:0002435,1.54e-10,4;UBERON:0000204,1.54e-10,4;UBERON:0010082,1.54e-10,4;UBERON:0002780,3.24e-10,41;UBERON:0001890,3.24e-10,41;UBERON:0003080,3.24e-10,41;UBERON:0006240,3.24e-10,41;UBERON:0000948,4.31e-10,24;UBERON:0005498,4.31e-10,24;UBERON:0004140,4.31e-10,24;UBERON:0009881,4.31e-10,24;UBERON:0004141,4.31e-10,24;UBERON:0003084,4.31e-10,24;UBERON:0007005,4.31e-10,24;UBERON:0004139,4.31e-10,24;UBERON:0004291,4.31e-10,24;UBERON:0002420,5.05e-10,9;UBERON:0007245,5.05e-10,9;UBERON:001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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3274 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5183 | |||
|TSSclassifier=S | |||
|UniProt=P25021 | |||
|association_with_transcript=-227bp_to_ENST00000377291_5end | |||
|coexpression_cluster_id=C4387 | |||
|description=CAGE_peak_3_at_HRH2_5end | |||
|id=chr5:175084797..175084805,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.87e-22;4!UBERON:0007284;1.87e-22;4!UBERON:0004140;2.79e-11;1!UBERON:0010226;3.94e-11;1!UBERON:0010115;9.49e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.16e-20;2!DOID:178;9.49e-11;1!DOID:326;9.49e-11;1!DOID:3978;9.49e-11;1!DOID:3394;9.49e-11;1!DOID:5844;9.49e-11;1!DOID:1287;1.36e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.67e-20,2;DOID:178,1.10e-10,1;DOID:326,1.10e-10,1;DOID:3978,1.10e-10,1;DOID:3394,1.10e-10,1;DOID:5844,1.10e-10,1;DOID:1287,1.47e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.07e-50!115;UBERON:0001049!1.35e-24!57;UBERON:0005068!1.35e-24!57;UBERON:0006241!1.35e-24!57;UBERON:0007135!1.35e-24!57;UBERON:0001017!2.46e-21!82;UBERON:0005743!7.87e-21!86;UBERON:0002780!2.66e-20!41;UBERON:0001890!2.66e-20!41;UBERON:0006240!2.66e-20!41;UBERON:0002020!3.81e-20!34;UBERON:0003528!3.81e-20!34;UBERON:0002616!4.27e-20!59;UBERON:0001893!6.58e-20!34;UBERON:0003075!1.06e-19!86;UBERON:0007284!1.06e-19!86;UBERON:0003080!1.27e-19!42;UBERON:0002346!2.74e-19!90;UBERON:0002791!7.99e-19!33;UBERON:0000955!8.40e-19!69;UBERON:0006238!8.40e-19!69;UBERON:0000073!1.02e-18!94;UBERON:0001016!1.02e-18!94;UBERON:0001869!5.57e-18!32;UBERON:0002619!2.77e-16!22;UBERON:0001950!8.46e-14!20;UBERON:0000956!8.63e-14!25;UBERON:0000203!8.63e-14!25;UBERON:0003056!5.78e-12!61;UBERON:0000924!1.51e-08!173;UBERON:0006601!1.51e-08!173;UBERON:0004121!1.58e-08!169;UBERON:0002420!1.95e-08!9;UBERON:0007245!1.95e-08!9;UBERON:0010009!1.95e-08!9;UBERON:0010011!1.95e-08!9;UBERON:0000454!1.95e-08!9;UBERON:0000349!2.97e-08!5;UBERON:0000153!4.14e-08!129;UBERON:0007811!4.14e-08!129;UBERON:0002298!4.74e-08!8;UBERON:0002308!5.45e-08!9;UBERON:0000125!5.45e-08!9;UBERON:0000033!7.74e-08!123;UBERON:0001871!1.89e-07!7;UBERON:0002390!9.57e-07!102;UBERON:0003061!9.57e-07!102;UBERON:0000200!9.74e-07!6 | |||
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|short_description=p3@HRH2 | |||
}} |
Revision as of 14:58, 13 September 2013
Short description: | p3@HRH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HRH2_5end |
Coexpression cluster: | C4387_heart_left_mature_skeletal_umbilical_bladder_esophagus |
Association with transcript: | -227bp_to_ENST00000377291_5end |
EntrezGene: | HRH2 |
HGNC: | 5183 |
UniProt: | P25021 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.67e-20 | 2 |
vascular disease | 1.10e-10 | 1 |
ischemia | 1.10e-10 | 1 |
extrinsic cardiomyopathy | 1.10e-10 | 1 |
myocardial ischemia | 1.10e-10 | 1 |
myocardial infarction | 1.10e-10 | 1 |
cardiovascular system disease | 1.47e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.