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FFCP PHASE1:Mm9::chr17:46889023..46889039,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=72029|HGNC=|UniProt=|association_with_transcript=86bp_to_ENSMUST00000148656_5end|description=CAGE_peak_4_at_Cnpy3_5end|id=chr17:46889023..46889039,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,6.93e-09,19;CL:0000034,7.11e-09,97;CL:0000117,1.22e-07,23;CL:0000337,1.22e-07,23;CL:0000723,3.25e-07,91;CL:0000048,3.25e-07,91;CL:0002293,6.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.41e-08!52;UBERON:0005068!7.41e-08!52;UBERON:0006241!7.41e-08!52;UBERON:0007135!7.41e-08!52;UBERON:0002020!1.60e-07!34;UBERON:0007811!5.11e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.31e-12,54;UBERON:0002020,4.49e-11,34;UBERON:0001049,1.84e-10,52;UBERON:0005068,1.84e-10,52;UBERON:0006241,1.84e-10,52;UBERON:0007135,1.84e-10,52;UBERON:0001017,3.98e-09,73;UBERON:0002346,4.01e-09,64;UBERON:0003075,4.01e-09,64;UBERON:0007284,4.01e-09,64;UBERON:0001016,1.05e-08,75;UBERON:0001948,2.16e-08,5;UBERON:0002315,2.16e-08,5;UBERON:0002021,2.27e-07,10;UBERON:0000411,2.27e-07,10;UBERON:0001950,2.27e-07,10;UBERON:0010371,2.93e-07,73;UBERON:0002240,6.60e-07,6;UBERON:0005174,6.60e-07,6;UBERON:0001137,6.60e-07,6;UBERON:0002616,9.80e-07,46|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0.319088635981346,0.342401459862411,0.874204024189974,0.333109761815663,0.202475267389826,0,1.10411757875383,1.09691546884591,0,0.510259740906419,0.496454756004426,1.30599894569468,0,0.68822784320151,0,0,0,0,0.252030129759931,0.221730510655305,1.27006134691926,1.84519436275371,0,0,0,0,0.418531630736908,0,0.523523743973798,1.76469446409304,0,0.485510353031154,1.00717454380462,0.506884656097573,0.367093504323363,3.9119567217402,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.838913030288682,0,2.01656279485478,0.514518872071894,0.286533439938757,0.515672092277442,0.809265843438391,1.5869729378161,0,0,0.889294796111139,0,1.97773272513395,0,0.299600110518405,0.384218305321555,0.311068836925433,0.270011876663381,0.210324961351382,2.28520787523043,1.76694832761291,0,0.287536413054709,0,2.20231761998777,1.14918604276669,0.921639199537461,0.395658863190582,1.28082701043374,1.04182674111352,1.3959149950069,2.25105044012672,0.45839474333043,1.47314292736834,1.28134512719193,1.86399445825301,0.075726193333184,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0.448026887097336,0.280888840263504,0.681721290312231,0.259786004602869,0,0.845060518660083,5.13305909657271,5.09610479413291,7.11066703153331,0,0.506719730950197,0,0.22836775943812,0,0.29688427812965,0.693941307064543,0,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,3.95389910869537,2.99951365496704,2.03312363316904,1.04853447583376,0.915001205637253,1.00523481690292,1.39059456153821,0.255715457330331,1.24672826735736,1.1356888414743,0.81471491080253,0.124406970610093,0.505445516867349,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.476255494059295,0.512454881139399,0.374806898238915,1.03481348295606,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,3.51106593656617,1.80143534980301,3.12579849335152,0.414251545071004,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.720332286654991,0,0,0,0,0.257734922644187,0.403367049246685,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.379335801906163,0.114248512609729,1.1270773567308,0,0.387904974335251,0.561086559122548,0.189709611372772,0,0,0.123397163921801,0,0.333690211432188,0,0.449724224769707,0,0.241177159752417,0.25462585178142,0,0.486405680325106,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0.37898282354097,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.195133647857799,0.630540576424764,1.32878813789265,0.318909537314974,0,0.172684981865896,0.723245292907558,3.01582567878545,0.54390568381871,0,0.275936746304732,1.12385412991454,0.234423373184406,0.983609672260053,0,0,1.17131623288992,0.215423397732799,0,0,0.283076530788832,0,0,0,0.321321316421807,0.283880170416537,0.534196811001766,0.651547837414304,0.164970122972535,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0.614870295887855,0,0.363533729477506,1.06949213515416,0.316036757935816,1.05418608574999,0,0.680879211507576,0.540183282093931,0.388076051348264,0,0,0,0.493647061806363,0.913394847343798,0,0,0,0,0.484393280087717,0.301564624640779,0.238744688006273,0.492422699235184,0,0.556275906031529,0,0.82554747185289,0.185194527369712,0.376736914009382,0.27338845544205,0,3.73952545986482,2.93898049879682,3.45499934511059,0,0.316335993581135,0,0,0.209088296014469,0,0,0.743881101528023,0,0.129614973291793,0,2.81846469342095,0,0.496375471371293,0.583353565032143,0.258319646955462,0,0.352071715937262,0.39061315453185,0.314578033277133,0.724752362478018,1.15212002503146,0.316011120628178,0.608175645870493,0.718976700153791,0.51968329191118,0.537080087002444,0.79472541912506,0.600977247599844,0.147689527174577,0.100966449948148,0.457240839929999,0.705783295957884,0.487289403698762,0,0.818138315270983,0,0,0.538283139656854,0,0.19318959403219,0,0,0,0.501572104035363,1.6942555278512,2.76195141904306,1.14579102687879,1.54667864109319,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,0.453142408984205,2.07104124700728,0.31136204275253,0,0.341467211508268,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.754505365544305,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,0.290692833264657,0.564656282491984,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0.661774257358546,0.463735671240843|short_description=p4@Cnpy3}}
|EntrezGene=72029
|HGNC=
|UniProt=
|association_with_transcript=86bp_to_ENSMUST00000148656_5end
|description=CAGE_peak_4_at_Cnpy3_5end
|id=chr17:46889023..46889039,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000049,6.93e-09,19;CL:0000034,7.11e-09,97;CL:0000117,1.22e-07,23;CL:0000337,1.22e-07,23;CL:0000723,3.25e-07,91;CL:0000048,3.25e-07,91;CL:0002293,6.23e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!7.41e-08!52;UBERON:0005068!7.41e-08!52;UBERON:0006241!7.41e-08!52;UBERON:0007135!7.41e-08!52;UBERON:0002020!1.60e-07!34;UBERON:0007811!5.11e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.31e-12,54;UBERON:0002020,4.49e-11,34;UBERON:0001049,1.84e-10,52;UBERON:0005068,1.84e-10,52;UBERON:0006241,1.84e-10,52;UBERON:0007135,1.84e-10,52;UBERON:0001017,3.98e-09,73;UBERON:0002346,4.01e-09,64;UBERON:0003075,4.01e-09,64;UBERON:0007284,4.01e-09,64;UBERON:0001016,1.05e-08,75;UBERON:0001948,2.16e-08,5;UBERON:0002315,2.16e-08,5;UBERON:0002021,2.27e-07,10;UBERON:0000411,2.27e-07,10;UBERON:0001950,2.27e-07,10;UBERON:0010371,2.93e-07,73;UBERON:0002240,6.60e-07,6;UBERON:0005174,6.60e-07,6;UBERON:0001137,6.60e-07,6;UBERON:0002616,9.80e-07,46
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0.319088635981346,0.342401459862411,0.874204024189974,0.333109761815663,0.202475267389826,0,1.10411757875383,1.09691546884591,0,0.510259740906419,0.496454756004426,1.30599894569468,0,0.68822784320151,0,0,0,0,0.252030129759931,0.221730510655305,1.27006134691926,1.84519436275371,0,0,0,0,0.418531630736908,0,0.523523743973798,1.76469446409304,0,0.485510353031154,1.00717454380462,0.506884656097573,0.367093504323363,3.9119567217402,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.838913030288682,0,2.01656279485478,0.514518872071894,0.286533439938757,0.515672092277442,0.809265843438391,1.5869729378161,0,0,0.889294796111139,0,1.97773272513395,0,0.299600110518405,0.384218305321555,0.311068836925433,0.270011876663381,0.210324961351382,2.28520787523043,1.76694832761291,0,0.287536413054709,0,2.20231761998777,1.14918604276669,0.921639199537461,0.395658863190582,1.28082701043374,1.04182674111352,1.3959149950069,2.25105044012672,0.45839474333043,1.47314292736834,1.28134512719193,1.86399445825301,0.075726193333184,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0.448026887097336,0.280888840263504,0.681721290312231,0.259786004602869,0,0.845060518660083,5.13305909657271,5.09610479413291,7.11066703153331,0,0.506719730950197,0,0.22836775943812,0,0.29688427812965,0.693941307064543,0,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,3.95389910869537,2.99951365496704,2.03312363316904,1.04853447583376,0.915001205637253,1.00523481690292,1.39059456153821,0.255715457330331,1.24672826735736,1.1356888414743,0.81471491080253,0.124406970610093,0.505445516867349,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.476255494059295,0.512454881139399,0.374806898238915,1.03481348295606,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,3.51106593656617,1.80143534980301,3.12579849335152,0.414251545071004,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.720332286654991,0,0,0,0,0.257734922644187,0.403367049246685,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.379335801906163,0.114248512609729,1.1270773567308,0,0.387904974335251,0.561086559122548,0.189709611372772,0,0,0.123397163921801,0,0.333690211432188,0,0.449724224769707,0,0.241177159752417,0.25462585178142,0,0.486405680325106,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0.37898282354097,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.195133647857799,0.630540576424764,1.32878813789265,0.318909537314974,0,0.172684981865896,0.723245292907558,3.01582567878545,0.54390568381871,0,0.275936746304732,1.12385412991454,0.234423373184406,0.983609672260053,0,0,1.17131623288992,0.215423397732799,0,0,0.283076530788832,0,0,0,0.321321316421807,0.283880170416537,0.534196811001766,0.651547837414304,0.164970122972535,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0.614870295887855,0,0.363533729477506,1.06949213515416,0.316036757935816,1.05418608574999,0,0.680879211507576,0.540183282093931,0.388076051348264,0,0,0,0.493647061806363,0.913394847343798,0,0,0,0,0.484393280087717,0.301564624640779,0.238744688006273,0.492422699235184,0,0.556275906031529,0,0.82554747185289,0.185194527369712,0.376736914009382,0.27338845544205,0,3.73952545986482,2.93898049879682,3.45499934511059,0,0.316335993581135,0,0,0.209088296014469,0,0,0.743881101528023,0,0.129614973291793,0,2.81846469342095,0,0.496375471371293,0.583353565032143,0.258319646955462,0,0.352071715937262,0.39061315453185,0.314578033277133,0.724752362478018,1.15212002503146,0.316011120628178,0.608175645870493,0.718976700153791,0.51968329191118,0.537080087002444,0.79472541912506,0.600977247599844,0.147689527174577,0.100966449948148,0.457240839929999,0.705783295957884,0.487289403698762,0,0.818138315270983,0,0,0.538283139656854,0,0.19318959403219,0,0,0,0.501572104035363,1.6942555278512,2.76195141904306,1.14579102687879,1.54667864109319,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,0.453142408984205,2.07104124700728,0.31136204275253,0,0.341467211508268,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.754505365544305,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,0.290692833264657,0.564656282491984,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0.661774257358546,0.463735671240843
|short_description=p4@Cnpy3
}}

Revision as of 14:41, 13 September 2013

Short description:p4@Cnpy3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cnpy3_5end
Coexpression cluster:NA
Association with transcript: 86bp_to_ENSMUST00000148656_5end
EntrezGene:Cnpy3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Cnpy3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
common myeloid progenitor6.93e-0919
stem cell7.11e-0997
CNS neuron (sensu Vertebrata)1.22e-0723
neuroblast (sensu Vertebrata)1.22e-0723
somatic stem cell3.25e-0791
multi fate stem cell3.25e-0791
epithelial cell of thymus6.23e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.31e-1254
gray matter4.49e-1134
neural tube1.84e-1052
neural rod1.84e-1052
future spinal cord1.84e-1052
neural keel1.84e-1052
central nervous system3.98e-0973
neurectoderm4.01e-0964
neural plate4.01e-0964
presumptive neural plate4.01e-0964
nervous system1.05e-0875
regional part of spinal cord2.16e-085
gray matter of spinal cord2.16e-085
occipital lobe2.27e-0710
visual cortex2.27e-0710
neocortex2.27e-0710
ecto-epithelium2.93e-0773
spinal cord6.60e-076
dorsal region element6.60e-076
dorsum6.60e-076
regional part of brain9.80e-0746







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