FFCP PHASE1:Hg19::chr5:16508921..16508942,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54463|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25964|TSSclassifier=S|UniProt=|association_with_transcript=88bp_to_uc003jfr.2_5end|coexpression_cluster_id=C20|description=CAGE_peak_3_at_FAM134B_5end|id=chr5:16508921..16508942,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;4.61e-10;29!UBERON:0003104;3.28e-08;31|ontology_enrichment_disease=DOID:305!1.52e-08!106|ontology_enrichment_disease_v019=DOID:114;7.45e-07;2|ontology_enrichment_disease_v019_2=DOID:114,7.66e-07,2|ontology_enrichment_uberon=UBERON:0007023!9.95e-22!115;UBERON:0001007!1.56e-11!155;UBERON:0001555!1.56e-11!155;UBERON:0007026!1.56e-11!155;UBERON:0001737!1.59e-11!9;UBERON:0004921!2.16e-11!129;UBERON:0004185!2.16e-11!129;UBERON:0000062!2.48e-10!511;UBERON:0004119!7.51e-10!169;UBERON:0000925!7.51e-10!169;UBERON:0006595!7.51e-10!169;UBERON:0001041!1.02e-09!98;UBERON:0000481!2.09e-09!347;UBERON:0001557!2.82e-09!19;UBERON:0000077!6.46e-09!130;UBERON:0001004!8.57e-08!72;UBERON:0000468!3.16e-07!659;UBERON:0008947!3.93e-07!38;UBERON:0003258!3.93e-07!38|ontology_enrichment_uberon_v019=UBERON:0001737;1.51e-21;9!UBERON:0001557;1.51e-21;9!UBERON:0004151;6.27e-09;3!UBERON:0003978;1.33e-08;3!UBERON:0000946;1.33e-08;3!UBERON:0007100;1.67e-07;25!UBERON:0005090;5.10e-07;2!UBERON:0001630;5.10e-07;2!UBERON:0000341;9.96e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.72e-21,9;UBERON:0001557,2.06e-14,19;UBERON:0007023,9.05e-11,114;UBERON:0001041,1.16e-10,87;UBERON:0004151,6.28e-09,3;UBERON:0003978,1.38e-08,3;UBERON:0009751,1.38e-08,3;UBERON:0000946,1.38e-08,3;UBERON:0002523,1.38e-08,3;UBERON:0005983,1.38e-08,3;UBERON:0002165,1.38e-08,3;UBERON:0002062,1.38e-08,3;UBERON:0007280,1.38e-08,3;UBERON:0004921,1.58e-08,118;UBERON:0001007,8.68e-08,145;UBERON:0001555,8.68e-08,145;UBERON:0007026,8.68e-08,145;UBERON:0000072,1.33e-07,47;UBERON:0003103,1.97e-07,68;UBERON:0008947,4.47e-07,38;UBERON:0003258,4.47e-07,38;UBERON:0004119,4.64e-07,160;UBERON:0000925,4.64e-07,160;UBERON:0006595,4.64e-07,160;UBERON:0005090,5.18e-07,2;UBERON:0001630,5.18e-07,2;UBERON:0007100,8.30e-07,27;UBERON:0000341,9.56e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,3.31259040111563,2.69735504124963,3.85617647813571,2.97793726377464,3.4860711054785,3.08451804844426,3.64044532032444,2.94332197688019,3.46272441251751,0,0,0,0,3.80265104465493,2.94848165003288,5.31710916013264,0,0.122988438543114,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.768834895534206,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0.231046011313244,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,5.87333766392017,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,7.76493350141038,0,0.445773537109913,0,6.92359005739301,1.48482340416319,3.68592842519078,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,1.07412704805365,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0,0.709163045303809,0,0,0,0.885741385813839,0,0,0.110579259931225,1.47773809476774,0.219385397153973,1.0893846351899,0.975966209950223,0.230850775511391,0,0,1.97466817701499,0.325942115766024,3.82801391678303,0.824378340616761,1.06606955203727,0,0,0,0,0,0,0,0,2.10998064528027,0.652931232636591,0.141353071433941,0,0,1.76915129006678,0.611030144933625,0,0,0,0.134802265961354,54.5752800163176,1.63985112007737,0,0.19566461893209,0,0,1.20990716048664,0,0.442306057399416,0,0,0.664653872707185,0,0,0,0,0,0,0.0979923974143777,0,4.54289337429278,0,0.290268993867255,0.438535902517113,0,3.58859361007152,0,6.77942222341597,0,0,0.126621591911757,0.782205530939212,0,0.213452994739353,13.9866726707491,2.16135625731159,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,9.21631924198439,15.3537484087828,1.43574604915363,16.5733570414163,40.3472485248377,53.7843212434913,27.4108567745843,0,1.16495949527454,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,2.34804281319486,30.7342258466873,1.52118305591495,0,7.53006825197948,0.383830394638891,40.7376336032819,68.1954729476395,0,0,0,0,0,0,0,0,6.44829828183563,0,0.258565912723101,0.26446520348538,0,0.704815022316672,0.961086713109252,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,1.41348686625211,0,0,0,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0,0.150420656698515,0,18.7563362695942,0,1.80149109261106,0,0.202612753855184,0,0,0.0634158101939068,0,0,15.8787577084574,0,0.127762427639595,0.535701835878287,0,1.21393120847326,0.455324382702595,1.77404740325278,0,0.171488009437418,1.01954599465248,0,0.118193840883968,0,0.313972371402056,0,0,0,4.53447941559105,0,0.214429632529969,0,0,0,0,0.62164849248911,2.3900586793153,0.691259661814092,0,0,0,0,4.1239236337929,0.62041277132864,0,2.23710863595585,0,5.36438869921985,53.7365934865953,126.685903660609,17.397216470073,6.31424290976881,0,0,0,0.33883824611688,0,0,3.93588206350518,1.09279780251979,18.3423745580994,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,1.07132363163395,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0,15.9925486425736,16.6645102024618,0,0.124149428591716,0,1.71847327351045,2.62752345645685,33.0929456803381,70.1578267224826,0.942928742204225,1.79305513481691,5.98788641782824,0,0,0,3.68283328637006,2.34640942403454,0.488965776731466,0.406896178315738,0,0.805095174364105,0|short_description=p3@FAM134B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54463 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25964 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=88bp_to_uc003jfr.2_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_FAM134B_5end | |||
|id=chr5:16508921..16508942,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.61e-10;29!UBERON:0003104;3.28e-08;31 | |||
|ontology_enrichment_disease=DOID:305!1.52e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:114;7.45e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.66e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.95e-22!115;UBERON:0001007!1.56e-11!155;UBERON:0001555!1.56e-11!155;UBERON:0007026!1.56e-11!155;UBERON:0001737!1.59e-11!9;UBERON:0004921!2.16e-11!129;UBERON:0004185!2.16e-11!129;UBERON:0000062!2.48e-10!511;UBERON:0004119!7.51e-10!169;UBERON:0000925!7.51e-10!169;UBERON:0006595!7.51e-10!169;UBERON:0001041!1.02e-09!98;UBERON:0000481!2.09e-09!347;UBERON:0001557!2.82e-09!19;UBERON:0000077!6.46e-09!130;UBERON:0001004!8.57e-08!72;UBERON:0000468!3.16e-07!659;UBERON:0008947!3.93e-07!38;UBERON:0003258!3.93e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.51e-21;9!UBERON:0001557;1.51e-21;9!UBERON:0004151;6.27e-09;3!UBERON:0003978;1.33e-08;3!UBERON:0000946;1.33e-08;3!UBERON:0007100;1.67e-07;25!UBERON:0005090;5.10e-07;2!UBERON:0001630;5.10e-07;2!UBERON:0000341;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.72e-21,9;UBERON:0001557,2.06e-14,19;UBERON:0007023,9.05e-11,114;UBERON:0001041,1.16e-10,87;UBERON:0004151,6.28e-09,3;UBERON:0003978,1.38e-08,3;UBERON:0009751,1.38e-08,3;UBERON:0000946,1.38e-08,3;UBERON:0002523,1.38e-08,3;UBERON:0005983,1.38e-08,3;UBERON:0002165,1.38e-08,3;UBERON:0002062,1.38e-08,3;UBERON:0007280,1.38e-08,3;UBERON:0004921,1.58e-08,118;UBERON:0001007,8.68e-08,145;UBERON:0001555,8.68e-08,145;UBERON:0007026,8.68e-08,145;UBERON:0000072,1.33e-07,47;UBERON:0003103,1.97e-07,68;UBERON:0008947,4.47e-07,38;UBERON:0003258,4.47e-07,38;UBERON:0004119,4.64e-07,160;UBERON:0000925,4.64e-07,160;UBERON:0006595,4.64e-07,160;UBERON:0005090,5.18e-07,2;UBERON:0001630,5.18e-07,2;UBERON:0007100,8.30e-07,27;UBERON:0000341,9.56e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,3.31259040111563,2.69735504124963,3.85617647813571,2.97793726377464,3.4860711054785,3.08451804844426,3.64044532032444,2.94332197688019,3.46272441251751,0,0,0,0,3.80265104465493,2.94848165003288,5.31710916013264,0,0.122988438543114,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.768834895534206,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0.231046011313244,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,5.87333766392017,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,7.76493350141038,0,0.445773537109913,0,6.92359005739301,1.48482340416319,3.68592842519078,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,1.07412704805365,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0,0.709163045303809,0,0,0,0.885741385813839,0,0,0.110579259931225,1.47773809476774,0.219385397153973,1.0893846351899,0.975966209950223,0.230850775511391,0,0,1.97466817701499,0.325942115766024,3.82801391678303,0.824378340616761,1.06606955203727,0,0,0,0,0,0,0,0,2.10998064528027,0.652931232636591,0.141353071433941,0,0,1.76915129006678,0.611030144933625,0,0,0,0.134802265961354,54.5752800163176,1.63985112007737,0,0.19566461893209,0,0,1.20990716048664,0,0.442306057399416,0,0,0.664653872707185,0,0,0,0,0,0,0.0979923974143777,0,4.54289337429278,0,0.290268993867255,0.438535902517113,0,3.58859361007152,0,6.77942222341597,0,0,0.126621591911757,0.782205530939212,0,0.213452994739353,13.9866726707491,2.16135625731159,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,9.21631924198439,15.3537484087828,1.43574604915363,16.5733570414163,40.3472485248377,53.7843212434913,27.4108567745843,0,1.16495949527454,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,2.34804281319486,30.7342258466873,1.52118305591495,0,7.53006825197948,0.383830394638891,40.7376336032819,68.1954729476395,0,0,0,0,0,0,0,0,6.44829828183563,0,0.258565912723101,0.26446520348538,0,0.704815022316672,0.961086713109252,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,1.41348686625211,0,0,0,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0,0.150420656698515,0,18.7563362695942,0,1.80149109261106,0,0.202612753855184,0,0,0.0634158101939068,0,0,15.8787577084574,0,0.127762427639595,0.535701835878287,0,1.21393120847326,0.455324382702595,1.77404740325278,0,0.171488009437418,1.01954599465248,0,0.118193840883968,0,0.313972371402056,0,0,0,4.53447941559105,0,0.214429632529969,0,0,0,0,0.62164849248911,2.3900586793153,0.691259661814092,0,0,0,0,4.1239236337929,0.62041277132864,0,2.23710863595585,0,5.36438869921985,53.7365934865953,126.685903660609,17.397216470073,6.31424290976881,0,0,0,0.33883824611688,0,0,3.93588206350518,1.09279780251979,18.3423745580994,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,1.07132363163395,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0,15.9925486425736,16.6645102024618,0,0.124149428591716,0,1.71847327351045,2.62752345645685,33.0929456803381,70.1578267224826,0.942928742204225,1.79305513481691,5.98788641782824,0,0,0,3.68283328637006,2.34640942403454,0.488965776731466,0.406896178315738,0,0.805095174364105,0 | |||
|short_description=p3@FAM134B | |||
}} |
Revision as of 14:36, 13 September 2013
Short description: | p3@FAM134B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAM134B_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 88bp_to_uc003jfr.2_5end |
EntrezGene: | FAM134B |
HGNC: | 25964 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.72e-21 | 9 |
upper respiratory tract | 2.06e-14 | 19 |
adult organism | 9.05e-11 | 114 |
foregut | 1.16e-10 | 87 |
cardiac chamber | 6.28e-09 | 3 |
valve | 1.38e-08 | 3 |
cardiac mesenchyme | 1.38e-08 | 3 |
cardial valve | 1.38e-08 | 3 |
tunica intima | 1.38e-08 | 3 |
heart layer | 1.38e-08 | 3 |
endocardium | 1.38e-08 | 3 |
endocardial cushion | 1.38e-08 | 3 |
presumptive endocardium | 1.38e-08 | 3 |
subdivision of digestive tract | 1.58e-08 | 118 |
digestive system | 8.68e-08 | 145 |
digestive tract | 8.68e-08 | 145 |
primitive gut | 8.68e-08 | 145 |
segment of respiratory tract | 1.33e-07 | 47 |
compound organ | 1.97e-07 | 68 |
respiratory primordium | 4.47e-07 | 38 |
endoderm of foregut | 4.47e-07 | 38 |
endoderm-derived structure | 4.64e-07 | 160 |
endoderm | 4.64e-07 | 160 |
presumptive endoderm | 4.64e-07 | 160 |
muscle structure | 5.18e-07 | 2 |
muscle organ | 5.18e-07 | 2 |
primary circulatory organ | 8.30e-07 | 27 |
throat | 9.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.66e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.