FFCP PHASE1:Mm9::chr17:35164801..35164813,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78376|HGNC=|MCL_coexpression_id=3096|UniProt=|association_with_transcript=147bp_to_NR_028258_5end|description=CAGE_peak_3_at_Ng23_5end|id=chr17:35164801..35164813,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!7.52e-08!9;UBERON:0000019!7.52e-08!9;UBERON:0000047!7.52e-08!9;UBERON:0004088!7.52e-08!9;UBERON:0002104!7.52e-08!9;UBERON:0001456!7.52e-08!9;UBERON:0003072!7.52e-08!9;UBERON:0003071!7.52e-08!9;UBERON:0004128!7.52e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.74e-34,9;UBERON:0000019,1.74e-34,9;UBERON:0000047,1.74e-34,9;UBERON:0010312,1.74e-34,9;UBERON:0004088,1.74e-34,9;UBERON:0002104,1.74e-34,9;UBERON:0001456,1.74e-34,9;UBERON:0003072,1.74e-34,9;UBERON:0004128,1.74e-34,9;UBERON:0003071,1.74e-34,9;UBERON:0001444,3.80e-28,11;UBERON:0000020,9.09e-26,12;UBERON:0001032,9.09e-26,12;UBERON:0004456,9.09e-26,12;UBERON:0000033,9.39e-24,13;UBERON:0005085,9.39e-24,13;UBERON:0007811,3.10e-08,36;UBERON:0003056,1.40e-07,49;UBERON:0002346,4.48e-07,64;UBERON:0003075,4.48e-07,64;UBERON:0007284,4.48e-07,64;UBERON:0000153,8.59e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39912375625629,0.157731082679119,0.137114433605739,0,0,3.07801948722744,6.79119451761232,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,1.35537812827653,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.489963196859816,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,1.2220723662038,0,0,0,1.95180664444056,5.9774547152703,4.14142898552303,5.27466862425003,2.99360596265843,2.3060469651273,2.62364828767241,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0.569003702859245,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94652465824877,1.17131623288992,0.646270193198397,0.477937595905104,0.222798674082394,0,0.809621403349789,0.584511715822624,0,0,0,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,1.08036656418786,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.540026704109006,0.418176592028937,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.645799117388655,0.506868376472335,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.608175645870493,0.205421914329655,0.25984164595559,0,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.304827226619999,0.302478555410522,0.38983152295901,0.288635524920988,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p3@Ng23}} | ||
|EntrezGene=78376 | |||
|HGNC= | |||
|MCL_coexpression_id=3096 | |||
|UniProt= | |||
|association_with_transcript=147bp_to_NR_028258_5end | |||
|description=CAGE_peak_3_at_Ng23_5end | |||
|id=chr17:35164801..35164813,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!7.52e-08!9;UBERON:0000019!7.52e-08!9;UBERON:0000047!7.52e-08!9;UBERON:0004088!7.52e-08!9;UBERON:0002104!7.52e-08!9;UBERON:0001456!7.52e-08!9;UBERON:0003072!7.52e-08!9;UBERON:0003071!7.52e-08!9;UBERON:0004128!7.52e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.74e-34,9;UBERON:0000019,1.74e-34,9;UBERON:0000047,1.74e-34,9;UBERON:0010312,1.74e-34,9;UBERON:0004088,1.74e-34,9;UBERON:0002104,1.74e-34,9;UBERON:0001456,1.74e-34,9;UBERON:0003072,1.74e-34,9;UBERON:0004128,1.74e-34,9;UBERON:0003071,1.74e-34,9;UBERON:0001444,3.80e-28,11;UBERON:0000020,9.09e-26,12;UBERON:0001032,9.09e-26,12;UBERON:0004456,9.09e-26,12;UBERON:0000033,9.39e-24,13;UBERON:0005085,9.39e-24,13;UBERON:0007811,3.10e-08,36;UBERON:0003056,1.40e-07,49;UBERON:0002346,4.48e-07,64;UBERON:0003075,4.48e-07,64;UBERON:0007284,4.48e-07,64;UBERON:0000153,8.59e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39912375625629,0.157731082679119,0.137114433605739,0,0,3.07801948722744,6.79119451761232,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,1.35537812827653,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.489963196859816,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,1.2220723662038,0,0,0,1.95180664444056,5.9774547152703,4.14142898552303,5.27466862425003,2.99360596265843,2.3060469651273,2.62364828767241,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0.569003702859245,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94652465824877,1.17131623288992,0.646270193198397,0.477937595905104,0.222798674082394,0,0.809621403349789,0.584511715822624,0,0,0,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,1.08036656418786,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.540026704109006,0.418176592028937,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.645799117388655,0.506868376472335,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.608175645870493,0.205421914329655,0.25984164595559,0,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.304827226619999,0.302478555410522,0.38983152295901,0.288635524920988,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p3@Ng23 | |||
}} |
Revision as of 14:19, 13 September 2013
Short description: | p3@Ng23 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ng23_5end |
Coexpression cluster: | MCL_coexpression_mm9:3096 |
Association with transcript: | 147bp_to_NR_028258_5end |
EntrezGene: | Ng23 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.74e-34 | 9 |
camera-type eye | 1.74e-34 | 9 |
simple eye | 1.74e-34 | 9 |
immature eye | 1.74e-34 | 9 |
ocular region | 1.74e-34 | 9 |
visual system | 1.74e-34 | 9 |
face | 1.74e-34 | 9 |
optic cup | 1.74e-34 | 9 |
optic vesicle | 1.74e-34 | 9 |
eye primordium | 1.74e-34 | 9 |
subdivision of head | 3.80e-28 | 11 |
sense organ | 9.09e-26 | 12 |
sensory system | 9.09e-26 | 12 |
entire sense organ system | 9.09e-26 | 12 |
head | 9.39e-24 | 13 |
ectodermal placode | 9.39e-24 | 13 |
craniocervical region | 3.10e-08 | 36 |
pre-chordal neural plate | 1.40e-07 | 49 |
neurectoderm | 4.48e-07 | 64 |
neural plate | 4.48e-07 | 64 |
presumptive neural plate | 4.48e-07 | 64 |
anterior region of body | 8.59e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.