FFCP PHASE1:Mm9::chr17:26158798..26158811,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=215445|HGNC=|MCL_coexpression_id=11|UniProt=Q8CHD8|association_with_transcript=0bp_to_ENSMUST00000118828,NM_153140,uc008bdc.2,uc008bdf.1_5end|description=CAGE_peak_2_at_Rab11fip3_5end|id=chr17:26158798..26158811,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!5.00e-18!14;UBERON:0003918!5.00e-18!14;UBERON:0005095!5.00e-18!14;UBERON:0007687!5.00e-18!14;UBERON:0006554!3.24e-15!16;UBERON:0001008!4.61e-14!17;UBERON:0000489!1.43e-10!21;UBERON:0003133!1.88e-10!24;UBERON:0005156!2.65e-09!26;UBERON:0000990!2.65e-09!26;UBERON:0003135!2.83e-09!15;UBERON:0003101!1.64e-08!16;UBERON:0000079!1.64e-08!16;UBERON:0000991!2.08e-08!18;UBERON:0005564!2.08e-08!18;UBERON:0000473!2.19e-08!14;UBERON:0004176!1.25e-07!17;UBERON:0009196!1.25e-07!17;UBERON:0009117!1.25e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.08e-25,14;UBERON:0003918,9.08e-25,14;UBERON:0011143,9.08e-25,14;UBERON:0005095,9.08e-25,14;UBERON:0007687,9.08e-25,14;UBERON:0006554,7.24e-19,18;UBERON:0001008,8.86e-18,19;UBERON:0000489,6.50e-16,21;UBERON:0005172,4.82e-07,49;UBERON:0005173,4.82e-07,49;UBERON:0002417,4.82e-07,49;UBERON:0000916,4.82e-07,49;UBERON:0003103,7.48e-07,43|phase1_expression=0,0,0,1.51232105653415,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3928355173436,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33688796500657,0,0,0,0,0,0,0,0,0,0,10.5049169341535,0,0,0,0,0,0,0,0,4.44950941921873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,1.33426826306922,1.71203063501303,0,2.30578536613615,4.02136334080431,2.18852119245266,1.36474860983384,0,0.216138049874694,0,0.569003702859245,2.28497025219458,5.63538678365402,7.73875045812194,13.1887691273986,15.2896087360894,38.1316318859271,76.6096668014135,97.6532087173351,122.163192282583,0,0,0.196558995113203,0,0,0,0,1.72617682470486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.42366414172764,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.436725127492355,0,0,0.26175594198403,0,0,1.12738587736838,0.299033092087958,0.330916980914195,0,0,0,0.117357238645754,0.5208175393758,1.46803082195995,1.44950472495604,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,4.01257683228291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0,0,0.50695859978048,0.565879024158229,0.37456602987953,0.384150914429216,0.459483751644906,0,0.231768651889711,0,0,0.147198920134397,0.685738504770831,0,0.476872379894642,0.726732083161643,0.282328141245992,0.338458431566706,0.548783918618318,0.789209134313529,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.964533054905707,0,0.467863216890817,0.429742108096597,0,0,0|short_description=p2@Rab11fip3}} | ||
|EntrezGene=215445 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=Q8CHD8 | |||
|association_with_transcript=0bp_to_ENSMUST00000118828,NM_153140,uc008bdc.2,uc008bdf.1_5end | |||
|description=CAGE_peak_2_at_Rab11fip3_5end | |||
|id=chr17:26158798..26158811,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!5.00e-18!14;UBERON:0003918!5.00e-18!14;UBERON:0005095!5.00e-18!14;UBERON:0007687!5.00e-18!14;UBERON:0006554!3.24e-15!16;UBERON:0001008!4.61e-14!17;UBERON:0000489!1.43e-10!21;UBERON:0003133!1.88e-10!24;UBERON:0005156!2.65e-09!26;UBERON:0000990!2.65e-09!26;UBERON:0003135!2.83e-09!15;UBERON:0003101!1.64e-08!16;UBERON:0000079!1.64e-08!16;UBERON:0000991!2.08e-08!18;UBERON:0005564!2.08e-08!18;UBERON:0000473!2.19e-08!14;UBERON:0004176!1.25e-07!17;UBERON:0009196!1.25e-07!17;UBERON:0009117!1.25e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.08e-25,14;UBERON:0003918,9.08e-25,14;UBERON:0011143,9.08e-25,14;UBERON:0005095,9.08e-25,14;UBERON:0007687,9.08e-25,14;UBERON:0006554,7.24e-19,18;UBERON:0001008,8.86e-18,19;UBERON:0000489,6.50e-16,21;UBERON:0005172,4.82e-07,49;UBERON:0005173,4.82e-07,49;UBERON:0002417,4.82e-07,49;UBERON:0000916,4.82e-07,49;UBERON:0003103,7.48e-07,43 | |||
|phase1_expression=0,0,0,1.51232105653415,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3928355173436,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33688796500657,0,0,0,0,0,0,0,0,0,0,10.5049169341535,0,0,0,0,0,0,0,0,4.44950941921873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,1.33426826306922,1.71203063501303,0,2.30578536613615,4.02136334080431,2.18852119245266,1.36474860983384,0,0.216138049874694,0,0.569003702859245,2.28497025219458,5.63538678365402,7.73875045812194,13.1887691273986,15.2896087360894,38.1316318859271,76.6096668014135,97.6532087173351,122.163192282583,0,0,0.196558995113203,0,0,0,0,1.72617682470486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.42366414172764,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.436725127492355,0,0,0.26175594198403,0,0,1.12738587736838,0.299033092087958,0.330916980914195,0,0,0,0.117357238645754,0.5208175393758,1.46803082195995,1.44950472495604,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,4.01257683228291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0,0,0.50695859978048,0.565879024158229,0.37456602987953,0.384150914429216,0.459483751644906,0,0.231768651889711,0,0,0.147198920134397,0.685738504770831,0,0.476872379894642,0.726732083161643,0.282328141245992,0.338458431566706,0.548783918618318,0.789209134313529,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.964533054905707,0,0.467863216890817,0.429742108096597,0,0,0 | |||
|short_description=p2@Rab11fip3 | |||
}} |
Revision as of 13:48, 13 September 2013
Short description: | p2@Rab11fip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rab11fip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000118828, NM_153140, uc008bdc.2, uc008bdf.1_5end |
EntrezGene: | Rab11fip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 9.08e-25 | 14 |
kidney mesenchyme | 9.08e-25 | 14 |
upper urinary tract | 9.08e-25 | 14 |
kidney rudiment | 9.08e-25 | 14 |
kidney field | 9.08e-25 | 14 |
urinary system structure | 7.24e-19 | 18 |
renal system | 8.86e-18 | 19 |
cavitated compound organ | 6.50e-16 | 21 |
abdomen element | 4.82e-07 | 49 |
abdominal segment element | 4.82e-07 | 49 |
abdominal segment of trunk | 4.82e-07 | 49 |
abdomen | 4.82e-07 | 49 |
compound organ | 7.48e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.