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FFCP PHASE1:Mm9::chr17:24856834..24856861,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=73474|HGNC=|MCL_coexpression_id=1036|UniProt=|association_with_transcript=48bp_to_ENSMUST00000161706,NR_027900,uc008axx.2_5end|description=CAGE_peak_1_at_Snhg9_5end|id=chr17:24856834..24856861,-|ontology_enrichment_celltype=CL:0000988!8.28e-15!32;CL:0002032!8.28e-15!32;CL:0000037!8.28e-15!32;CL:0000566!8.28e-15!32;CL:0000837!8.28e-15!32;CL:0002320!2.44e-12!46;CL:0000134!2.44e-12!46;CL:0002031!6.46e-12!25;CL:0000063!1.33e-10!66;CL:0000219!3.88e-10!54;CL:0000542!2.06e-08!13;CL:0000051!2.06e-08!13;CL:0000838!4.39e-08!12;CL:0000049!9.53e-08!19;CL:0000084!1.56e-07!11;CL:0000827!1.56e-07!11;CL:0000738!1.73e-07!17;CL:0002087!1.73e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,8.28e-15,32;CL:0002032,8.28e-15,32;CL:0000037,8.28e-15,32;CL:0000837,8.28e-15,32;CL:0002320,2.44e-12,46;CL:0000134,2.44e-12,46;CL:0002031,6.46e-12,25;CL:0000219,3.88e-10,54;CL:0000542,2.06e-08,13;CL:0000051,2.06e-08,13;CL:0000838,4.39e-08,12;CL:0000049,9.53e-08,19;CL:0000084,1.56e-07,11;CL:0000827,1.56e-07,11;CL:0000738,1.73e-07,17;CL:0002087,1.73e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.44e-12!46;UBERON:0002390!4.28e-11!45;UBERON:0003061!4.28e-11!45;UBERON:0002193!1.42e-10!48;UBERON:0002405!1.87e-08!70;UBERON:0004177!2.02e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.44e-12,46;UBERON:0002390,4.28e-11,45;UBERON:0003061,4.28e-11,45;UBERON:0002193,1.42e-10,48;UBERON:0002405,1.42e-10,48;UBERON:0000077,1.59e-07,35;UBERON:0004177,2.02e-07,29;UBERON:0005057,2.02e-07,29|phase1_expression=6.88640042550614,10.1202868215415,8.18998630901165,9.0739263392049,15.0268718983904,9.23335995515394,8.87728034262997,22.854828249159,40.969518146135,27.1514850533512,42.2908381516997,26.4843567864517,34.7537481760348,18.8828069225034,28.3143297543313,30.3712901084739,39.1754651751762,15.2999150198745,17.824876368746,21.6438722416995,4.84746753861098,27.2057206290426,25.0751797573378,8.79958325363737,11.0116454912242,9.76194338995534,5.1691439539089,4.52489588640367,7.41091335879858,12.6015064879965,15.5211357458713,84.459079570131,76.8830984480713,31.6963362030877,41.5946332441835,26.0988393212833,40.4255325399491,7.53356935326434,10.1573594788094,9.94695113550217,34.7056577938298,12.9778642142105,5.82612423637384,6.6725313527056,5.77848507951233,10.2786181210542,23.4717403304412,10.247182349881,5.05278220289285,6.9994763666742,6.57936181639204,15.8127820801469,27.348564787411,40.6202799526353,25.8792225339697,7.46052364504246,9.74213695791773,8.25075347643908,3.64169629547276,4.23192783417626,8.23980824558033,10.8430250262122,16.0073063300005,13.0485459005803,8.89979726310277,12.0781619540837,10.4860038681442,18.8266969607562,3.83651565541367,7.42532660824299,5.8890989178387,10.2834354385369,14.1355866209033,6.1245399607477,5.36734637702124,8.27296907949019,2.20231761998777,1.78762273319263,1.84327839907492,4.08847491963601,5.03182039813253,6.77187381723788,2.23346399201105,5.6276261003168,5.04234217663473,2.06240009831567,6.40672563595963,6.33758115806022,6.58817881998701,6.34801104896998,33.6242806893946,9.46466264679525,15.6393406752783,5.39703191637817,7.14754059192436,4.48026887097336,1.26399978118577,9.20323741921512,8.83272415649754,10.2468476607999,7.60554466794075,3.84979432242953,0,7.11066703153331,59.9680183601063,49.6585336331193,66.7292267419514,5.93756174539112,8.02707439306232,5.34391700633369,15.0932234286538,15.2232739156071,7.37969591219387,7.08396410597326,8.46638691377075,3.39299796590124,6.92145909656247,4.04878199375753,11.4999371753484,7.117741397686,7.95029466457417,14.5462575940567,5.59175283654366,11.4184510834503,3.77004072264219,5.10914110417183,16.0552266837933,36.5940665905979,15.3754974758408,5.69204429738326,8.23501085073528,6.28271760564322,4.17178368461463,2.55715457330331,6.44142938134636,4.54275536589721,14.155671575194,8.8328949133166,40.435641349388,6.10281382070775,12.8819238533077,9.19608417733892,7.38254732201932,10.7000420663358,9.11689088627793,7.43059577652129,5.62210347358373,7.50239775143145,9.7005596819779,4.53854592402766,11.6127741948206,17.9740500590611,16.6828349535359,13.5818344943645,11.7295817752528,19.7043924150308,16.8531164955176,16.4702660553418,26.9955324425813,9.11353399156208,10.3191466391682,9.7233513188948,4.49814997611899,5.70616272067471,7.40482141859416,5.11574678450897,7.77992864058896,5.60473643362414,4.11399624783701,5.91002870684743,2.99954595319666,4.23979963533464,3.95190207523891,3.08674763148855,6.72927835405207,5.9684675179985,3.63460661282178,6.87571473325215,16.8497717922835,19.5078804362768,11.9846739029547,13.9161631990106,12.8979265430025,8.17970192284004,9.96511029243474,8.07024878147653,9.80207314321051,8.95304124185179,10.1381325301942,4.49409704327111,11.0230405436094,7.36822711041159,11.1904061562318,19.4222471436539,10.1436962105772,16.4957575554705,20.9468686141036,12.3439043006961,7.58838445491087,5.31396532726568,7.69293766422737,5.67626954040282,5.92905254174298,14.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|EntrezGene=73474
|HGNC=
|MCL_coexpression_id=1036
|UniProt=
|association_with_transcript=48bp_to_ENSMUST00000161706,NR_027900,uc008axx.2_5end
|description=CAGE_peak_1_at_Snhg9_5end
|id=chr17:24856834..24856861,-
|ontology_enrichment_celltype=CL:0000988!8.28e-15!32;CL:0002032!8.28e-15!32;CL:0000037!8.28e-15!32;CL:0000566!8.28e-15!32;CL:0000837!8.28e-15!32;CL:0002320!2.44e-12!46;CL:0000134!2.44e-12!46;CL:0002031!6.46e-12!25;CL:0000063!1.33e-10!66;CL:0000219!3.88e-10!54;CL:0000542!2.06e-08!13;CL:0000051!2.06e-08!13;CL:0000838!4.39e-08!12;CL:0000049!9.53e-08!19;CL:0000084!1.56e-07!11;CL:0000827!1.56e-07!11;CL:0000738!1.73e-07!17;CL:0002087!1.73e-07!17
|ontology_enrichment_celltype_v019_2=CL:0000988,8.28e-15,32;CL:0002032,8.28e-15,32;CL:0000037,8.28e-15,32;CL:0000837,8.28e-15,32;CL:0002320,2.44e-12,46;CL:0000134,2.44e-12,46;CL:0002031,6.46e-12,25;CL:0000219,3.88e-10,54;CL:0000542,2.06e-08,13;CL:0000051,2.06e-08,13;CL:0000838,4.39e-08,12;CL:0000049,9.53e-08,19;CL:0000084,1.56e-07,11;CL:0000827,1.56e-07,11;CL:0000738,1.73e-07,17;CL:0002087,1.73e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!2.44e-12!46;UBERON:0002390!4.28e-11!45;UBERON:0003061!4.28e-11!45;UBERON:0002193!1.42e-10!48;UBERON:0002405!1.87e-08!70;UBERON:0004177!2.02e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.44e-12,46;UBERON:0002390,4.28e-11,45;UBERON:0003061,4.28e-11,45;UBERON:0002193,1.42e-10,48;UBERON:0002405,1.42e-10,48;UBERON:0000077,1.59e-07,35;UBERON:0004177,2.02e-07,29;UBERON:0005057,2.02e-07,29
|phase1_expression=6.88640042550614,10.1202868215415,8.18998630901165,9.0739263392049,15.0268718983904,9.23335995515394,8.87728034262997,22.854828249159,40.969518146135,27.1514850533512,42.2908381516997,26.4843567864517,34.7537481760348,18.8828069225034,28.3143297543313,30.3712901084739,39.1754651751762,15.2999150198745,17.824876368746,21.6438722416995,4.84746753861098,27.2057206290426,25.0751797573378,8.79958325363737,11.0116454912242,9.76194338995534,5.1691439539089,4.52489588640367,7.41091335879858,12.6015064879965,15.5211357458713,84.459079570131,76.8830984480713,31.6963362030877,41.5946332441835,26.0988393212833,40.4255325399491,7.53356935326434,10.1573594788094,9.94695113550217,34.7056577938298,12.9778642142105,5.82612423637384,6.6725313527056,5.77848507951233,10.2786181210542,23.4717403304412,10.247182349881,5.05278220289285,6.9994763666742,6.57936181639204,15.8127820801469,27.348564787411,40.6202799526353,25.8792225339697,7.46052364504246,9.74213695791773,8.25075347643908,3.64169629547276,4.23192783417626,8.23980824558033,10.8430250262122,16.0073063300005,13.0485459005803,8.89979726310277,12.0781619540837,10.4860038681442,18.8266969607562,3.83651565541367,7.42532660824299,5.8890989178387,10.2834354385369,14.1355866209033,6.1245399607477,5.36734637702124,8.27296907949019,2.20231761998777,1.78762273319263,1.84327839907492,4.08847491963601,5.03182039813253,6.77187381723788,2.23346399201105,5.6276261003168,5.04234217663473,2.06240009831567,6.40672563595963,6.33758115806022,6.58817881998701,6.34801104896998,33.6242806893946,9.46466264679525,15.6393406752783,5.39703191637817,7.14754059192436,4.48026887097336,1.26399978118577,9.20323741921512,8.83272415649754,10.2468476607999,7.60554466794075,3.84979432242953,0,7.11066703153331,59.9680183601063,49.6585336331193,66.7292267419514,5.93756174539112,8.02707439306232,5.34391700633369,15.0932234286538,15.2232739156071,7.37969591219387,7.08396410597326,8.46638691377075,3.39299796590124,6.92145909656247,4.04878199375753,11.4999371753484,7.117741397686,7.95029466457417,14.5462575940567,5.59175283654366,11.4184510834503,3.77004072264219,5.10914110417183,16.0552266837933,36.5940665905979,15.3754974758408,5.69204429738326,8.23501085073528,6.28271760564322,4.17178368461463,2.55715457330331,6.44142938134636,4.54275536589721,14.155671575194,8.8328949133166,40.435641349388,6.10281382070775,12.8819238533077,9.19608417733892,7.38254732201932,10.7000420663358,9.11689088627793,7.43059577652129,5.62210347358373,7.50239775143145,9.7005596819779,4.53854592402766,11.6127741948206,17.9740500590611,16.6828349535359,13.5818344943645,11.7295817752528,19.7043924150308,16.8531164955176,16.4702660553418,26.9955324425813,9.11353399156208,10.3191466391682,9.7233513188948,4.49814997611899,5.70616272067471,7.40482141859416,5.11574678450897,7.77992864058896,5.60473643362414,4.11399624783701,5.91002870684743,2.99954595319666,4.23979963533464,3.95190207523891,3.08674763148855,6.72927835405207,5.9684675179985,3.63460661282178,6.87571473325215,16.8497717922835,19.5078804362768,11.9846739029547,13.9161631990106,12.8979265430025,8.17970192284004,9.96511029243474,8.07024878147653,9.80207314321051,8.95304124185179,10.1381325301942,4.49409704327111,11.0230405436094,7.36822711041159,11.1904061562318,19.4222471436539,10.1436962105772,16.4957575554705,20.9468686141036,12.3439043006961,7.58838445491087,5.31396532726568,7.69293766422737,5.67626954040282,5.92905254174298,14.3486790915841,19.8524585064335,20.6873143394065,11.7658870405332,12.3000351473733,10.6942857748196,10.64475708568,15.5649817704034,15.1008777253445,8.62609239164127,5.20997326735905,9.98520553966594,5.80931419278357,4.84373016509163,5.30687873499704,7.944387177164,13.0749074121634,7.00749398700711,18.5022143494955,16.4283173801951,5.02518772325447,7.61739650835244,7.21994497073856,5.99013547603526,11.2946991720875,5.26200736569707,7.04612253277673,6.04397436530635,8.10034728056465,10.5553898757491,6.52686820582452,12.7858710984949,11.313406598494,3.69266356971921,4.92289083687253,3.93443868904021,5.30188947129183,10.0962630213202,11.3227235846025,4.52389135238878,8.36390792833932,6.68396022247182,5.66153061577665,14.5731852602962,5.55286130031493,5.13874111330481,12.5315313404505,9.08416545332919,17.450429159391,14.985600260529,15.8371318053634,9.2921596837974,16.0235219862288,29.0230614686161,18.483297816078,9.44966057218473,8.60818414242997,9.8202751403924,10.5424781548477,8.55593708123331,16.4339114126624,10.5418608574999,12.3762651897824,18.7241783164583,15.665315180724,14.1000965323202,7.07312215604255,6.7389288784064,8.38333442729732,9.87294123612726,7.61162372786498,7.97883807416615,7.20229040936989,12.5701186891328,7.4198813823666,12.5942252822806,9.77069383836125,5.37175548014114,6.23735419031233,8.16146342563582,5.37733375830478,12.4735742982432,16.9237231729842,20.1862034832986,25.0530047816239,14.4895881384287,13.9554685655979,8.66889992968662,10.3564074719507,11.8851977471804,22.9120948323627,11.8625997592926,10.1659733563424,12.0965981720417,18.1906817532588,10.2630404960703,15.1048067950999,8.01738520535759,7.0674104335688,8.03612834409116,9.94142900939081,2.25477175473676,8.67195967055077,7.94200754194069,7.38914515707381,7.4912697617084,6.75824501963113,10.2100797621806,12.1090077904874,11.953965264531,20.2930661493845,12.6733202753461,12.6404448251271,13.1771389938607,23.4180982335806,31.1809975146708,26.1378975674523,10.1327490938445,16.7071674832757,15.6550898805052,15.2459339421703,17.603772337305,14.518970659705,13.8390190650448,16.356013078856,14.8433665770593,5.66825959038028,5.54964883435162,35.1678317909145,7.38692312001945,10.8186172658027,7.50729901804728,11.721703953105,15.0057865355346,17.0534515372024,8.471277639256,11.0478056761722,6.30185064783336,30.4180132748327,8.90607275701835,9.82012066606611,8.10027000278167,8.10578165803597,2.71885445390523,7.7664046762773,8.71813719707084,10.7736715818278,14.5123564891014,15.5588298923708,7.33646069197938,6.43452279575049,8.00088220085815,8.24140228955577,8.66481865897901,6.57012750585873,7.60437899670719,6.79054828989874,8.5213771797593,6.59459069770154,5.57124048869449,7.62069906052918,6.83717523074647,9.64546102318525,9.89006161927936,6.77115032618228,12.6861623382604,8.34136288948886,8.82213902805088,12.3544454137479,8.65806299821042,11.4229720653763,8.96347067076586,8.41823076601097,10.1853085384396,12.3451299764702,6.64356101495375,6.00877342490937,11.0492381655816,9.76102099471586,7.9091710502268,4.24677982494508,6.78401664491684,10.7435527024149,14.9204899013698,6.17655973534643,7.65163857547391
|short_description=p1@Snhg9
}}

Revision as of 13:43, 13 September 2013

Short description:p1@Snhg9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Snhg9_5end
Coexpression cluster:MCL_coexpression_mm9:1036
Association with transcript: 48bp_to_ENSMUST00000161706, NR_027900, uc008axx.2_5end
EntrezGene:Snhg9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Snhg9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E740.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E642.29
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F126.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E434.75
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.37
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A539.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.30
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A621.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I925.08
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B97.41
Ileum epithelium, pool2.CNhs13232.10253-104C112.60
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I384.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G676.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F541.59
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F626.10
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F740.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G934.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.78
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.25
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I940.62
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A125.88
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.08
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D96.59
Mouse Schwann, donor2.CNhs12573.11746-123F96.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G159.97
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G249.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G366.73
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.94
accessory axillary lymph node, adult.CNhs10475.1063-29H98.03
adrenal gland, adult.CNhs10508.49-24D75.34
adrenal gland, embryo E14.CNhs11038.406-44C515.09
adrenal gland, embryo E16.CNhs11004.1254-43D615.22
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.06
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D136.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.38
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F16.28
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.83
epididymis, adult.CNhs10490.58-23B240.44
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C612.88
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D410.70
eyeball, neonate N00.CNhs11207.633-15C69.12
eyeball, neonate N01.CNhs11140.1532-43E77.43
eyeball, neonate N02.CNhs11205.1551-44G85.62
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E211.61
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E716.68
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B511.73
gonad, embryo E13.CNhs11044.1564-45I619.70
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.85
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.47
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.00
heart, embryo E11.CNhs10586.331-24E99.11
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C85.71
heart, embryo E16.CNhs11021.457-17C67.40
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E35.60
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G15.91
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G15.97
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I516.85
intestine, embryo E13.CNhs11010.381-16D519.51
intestine, embryo E15.CNhs10602.976-16D811.98
intestine, embryo E16.CNhs10585.463-22H413.92
intestine, embryo E17.CNhs10582.482-18D312.90
intestine, embryo E18.CNhs10526.1289-20F78.18
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E98.07
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E311.02
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I911.19
kidney, embryo E15.CNhs10997.434-16F819.42
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I216.50
kidney, embryo E18.CNhs11001.1288-20C720.95
kidney, neonate N00.CNhs11214.646-21G712.34
kidney, neonate N10.CNhs11206.758-6D57.59
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H15.68
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F814.35
liver, embryo E13.CNhs10524.378-3H619.85
liver, embryo E14.CNhs10594.409-16E120.69
liver, embryo E15.CNhs10520.433-16D711.77
liver, embryo E16.CNhs10523.462-17F512.30
liver, embryo E17.CNhs10510.481-18A310.69
liver, embryo E18.CNhs10579.499-43G410.64
liver, neonate N00.CNhs11117.641-24F415.56
liver, neonate N03.CNhs11123.1345-25G215.10
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B17.94
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F87.01
lung, embryo E15.CNhs11020.432-17C518.50
lung, embryo E16.CNhs10998.458-17B616.43
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H211.31
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.32
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I79.08
ovary, embryo E18.CNhs11040.505-44H717.45
ovary, neonate N00.CNhs11217.1299-22I414.99
oviduct, adult pregnant day01.CNhs10500.988-6G615.84
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F416.02
pancreas, embryo E15.CNhs11042.1556-45F229.02
pancreas, embryo E16.CNhs11003.460-26E518.48
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B616.43
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E615.67
pituitary gland, embryo E13.CNhs11009.370-44C714.10
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I77.98
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F812.57
skin, adult.CNhs10492.30-1C37.42
skin, neonate N00.CNhs11124.650-25G412.59
skin, neonate N03.CNhs11215.662-22H39.77
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G212.47
spleen, embryo E16.CNhs11035.461-43C116.92
spleen, embryo E18.CNhs11011.1271-21F220.19
spleen, neonate N10.CNhs11116.752-24D125.05
spleen, neonate N20.CNhs11112.824-19H114.49
spleen, neonate N25.CNhs11099.1354-25G313.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.89
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E311.86
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D412.10
stomach, embryo E17.CNhs11006.1035-18D518.19
stomach, embryo E18.CNhs10999.1286-20C610.26
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A98.02
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I18.04
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F58.67
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G57.39
testis, embryo E17.CNhs11029.486-18I57.49
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B710.21
testis, neonate N07.CNhs11222.726-26I412.11
testis, neonate N10.CNhs11204.763-44D911.95
testis, neonate N20.CNhs11110.839-18H320.29
testis, neonate N30.CNhs11130.1391-42E212.67
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I413.18
thymus, embryo E15.CNhs11005.430-45I223.42
thymus, embryo E16.CNhs11002.456-26C531.18
thymus, embryo E17.CNhs10581.478-18C126.14
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F816.71
thymus, neonate N03.CNhs11137.2104-43C715.66
thymus, neonate N06.CNhs11197.681-26C415.25
thymus, neonate N07.CNhs11211.713-19D317.60
thymus, neonate N10.CNhs11194.748-24E414.52
thymus, neonate N20.CNhs11186.820-7A213.84
thymus, neonate N25.CNhs11125.1362-25G716.36
thymus, neonate N30.CNhs11132.1393-42G214.84
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F735.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.39
urinary bladder, adult.CNhs10481.879-12E410.82
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E511.72
vagina, adult.CNhs10502.89-27D515.01
vesicular gland, adult.CNhs10491.51-27F817.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I88.72
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H214.51
whole body, embryo E14.5.CNhs10578.420-27D215.56
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.19
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C210.74
whole body, neonate N01.CNhs10576.659-23C614.92
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B47.65





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
connective tissue2.44e-1246
hematopoietic system4.28e-1145
blood island4.28e-1145
hemolymphoid system1.42e-1048
immune system1.42e-1048
mixed endoderm/mesoderm-derived structure1.59e-0735
hemopoietic organ2.02e-0729
immune organ2.02e-0729







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