FFCP PHASE1:Mm9::chr16:89169678..89169682,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100502776|HGNC=|MCL_coexpression_id=91|UniProt=D3YX18|association_with_transcript=-52bp_to_ENSMUST00000089098_5end|description=CAGE_peak_1_at_Gm19364_5end|id=chr16:89169678..89169682,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!4.15e-16!5;UBERON:0001003!4.15e-16!5;UBERON:0002097!4.15e-16!5;UBERON:0002199!4.15e-16!5;UBERON:0007029!4.15e-16!5;UBERON:0007376!4.15e-16!5;UBERON:0002416!4.15e-16!5;UBERON:0007383!4.15e-16!5;UBERON:0003102!2.43e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.27e-27,5;UBERON:0001003,6.27e-27,5;UBERON:0002097,6.27e-27,5;UBERON:0002199,6.27e-27,5;UBERON:0007029,6.27e-27,5;UBERON:0007376,6.27e-27,5;UBERON:0002416,6.27e-27,5;UBERON:0007383,6.27e-27,5;UBERON:0003102,4.84e-17,22;UBERON:0002102,2.37e-09,7;UBERON:0004710,2.37e-09,7;UBERON:0005419,2.37e-09,7;UBERON:0005417,2.37e-09,7;UBERON:0005729,2.37e-09,7;UBERON:0010708,2.66e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.626590993931,18.7261744131229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,121.521168417871,0,0.663442174209714,4.29740438411291,15.4292445760358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0.701794825336225,0.859484216193193,1.91288332068843,0.882365676478062,0.463735671240843|short_description=p1@Gm19364}} | ||
|EntrezGene=100502776 | |||
|HGNC= | |||
|MCL_coexpression_id=91 | |||
|UniProt=D3YX18 | |||
|association_with_transcript=-52bp_to_ENSMUST00000089098_5end | |||
|description=CAGE_peak_1_at_Gm19364_5end | |||
|id=chr16:89169678..89169682,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!4.15e-16!5;UBERON:0001003!4.15e-16!5;UBERON:0002097!4.15e-16!5;UBERON:0002199!4.15e-16!5;UBERON:0007029!4.15e-16!5;UBERON:0007376!4.15e-16!5;UBERON:0002416!4.15e-16!5;UBERON:0007383!4.15e-16!5;UBERON:0003102!2.43e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.27e-27,5;UBERON:0001003,6.27e-27,5;UBERON:0002097,6.27e-27,5;UBERON:0002199,6.27e-27,5;UBERON:0007029,6.27e-27,5;UBERON:0007376,6.27e-27,5;UBERON:0002416,6.27e-27,5;UBERON:0007383,6.27e-27,5;UBERON:0003102,4.84e-17,22;UBERON:0002102,2.37e-09,7;UBERON:0004710,2.37e-09,7;UBERON:0005419,2.37e-09,7;UBERON:0005417,2.37e-09,7;UBERON:0005729,2.37e-09,7;UBERON:0010708,2.66e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.626590993931,18.7261744131229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,121.521168417871,0,0.663442174209714,4.29740438411291,15.4292445760358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0.701794825336225,0.859484216193193,1.91288332068843,0.882365676478062,0.463735671240843 | |||
|short_description=p1@Gm19364 | |||
}} |
Revision as of 13:14, 13 September 2013
Short description: | p1@Gm19364 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm19364_5end |
Coexpression cluster: | MCL_coexpression_mm9:91 |
Association with transcript: | -52bp_to_ENSMUST00000089098_5end |
EntrezGene: | Gm19364 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 6.27e-27 | 5 |
skin epidermis | 6.27e-27 | 5 |
skin of body | 6.27e-27 | 5 |
integument | 6.27e-27 | 5 |
surface | 6.27e-27 | 5 |
outer epithelium | 6.27e-27 | 5 |
integumental system | 6.27e-27 | 5 |
enveloping layer of ectoderm | 6.27e-27 | 5 |
surface structure | 4.84e-17 | 22 |
forelimb | 2.37e-09 | 7 |
pectoral appendage | 2.37e-09 | 7 |
pectoral appendage bud | 2.37e-09 | 7 |
forelimb bud | 2.37e-09 | 7 |
forelimb/pectoral fin field | 2.37e-09 | 7 |
pectoral complex | 2.66e-08 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.