FFCP PHASE1:Mm9::chr16:57199200..57199210,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=457|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:57199200..57199210,-|id=chr16:57199200..57199210,-|ontology_enrichment_celltype=CL:0000473!4.65e-12!3;CL:0000627!4.65e-12!3;CL:0000682!4.65e-12!3;CL:0000239!6.27e-10!6;CL:0000677!6.27e-10!6;CL:0000212!6.27e-10!6;CL:0000584!6.27e-10!6;CL:0000075!1.62e-08!7|ontology_enrichment_celltype_v019_2=CL:0000682,1.69e-33,3;CL:0000473,8.03e-15,7;CL:0000066,4.33e-11,25;CL:0000239,4.75e-08,6;CL:0000677,4.75e-08,6;CL:0000584,4.75e-08,6;CL:0000075,5.00e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.34e-11!15;UBERON:0001962!1.38e-08!2;UBERON:0001961!1.38e-08!2;UBERON:0001744!1.38e-08!2;UBERON:0001242!6.61e-07!13;UBERON:0000060!6.61e-07!13;UBERON:0001262!6.61e-07!13;UBERON:0004786!6.61e-07!13;UBERON:0004923!9.68e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001962,6.57e-23,2;UBERON:0001961,6.57e-23,2;UBERON:0001744,6.57e-23,2;UBERON:0000344,2.09e-18,15;UBERON:0002465,1.23e-15,3;UBERON:0003199,1.55e-12,1;UBERON:0004923,1.31e-11,24;UBERON:0001242,3.45e-08,13;UBERON:0001262,3.45e-08,13;UBERON:0004786,3.45e-08,13|phase1_expression=0,0.697950815278722,0.909998478779072,0,0,1.6787927191189,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,3.67054849707472,3.44539178469012,3.01533397311352,3.66301095566011,0,0,9.75614246883341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr16:57199200..57199210,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=457 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:57199200..57199210,- | |||
|id=chr16:57199200..57199210,- | |||
|ontology_enrichment_celltype=CL:0000473!4.65e-12!3;CL:0000627!4.65e-12!3;CL:0000682!4.65e-12!3;CL:0000239!6.27e-10!6;CL:0000677!6.27e-10!6;CL:0000212!6.27e-10!6;CL:0000584!6.27e-10!6;CL:0000075!1.62e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.69e-33,3;CL:0000473,8.03e-15,7;CL:0000066,4.33e-11,25;CL:0000239,4.75e-08,6;CL:0000677,4.75e-08,6;CL:0000584,4.75e-08,6;CL:0000075,5.00e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.34e-11!15;UBERON:0001962!1.38e-08!2;UBERON:0001961!1.38e-08!2;UBERON:0001744!1.38e-08!2;UBERON:0001242!6.61e-07!13;UBERON:0000060!6.61e-07!13;UBERON:0001262!6.61e-07!13;UBERON:0004786!6.61e-07!13;UBERON:0004923!9.68e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,6.57e-23,2;UBERON:0001961,6.57e-23,2;UBERON:0001744,6.57e-23,2;UBERON:0000344,2.09e-18,15;UBERON:0002465,1.23e-15,3;UBERON:0003199,1.55e-12,1;UBERON:0004923,1.31e-11,24;UBERON:0001242,3.45e-08,13;UBERON:0001262,3.45e-08,13;UBERON:0004786,3.45e-08,13 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0,0,1.6787927191189,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,3.67054849707472,3.44539178469012,3.01533397311352,3.66301095566011,0,0,9.75614246883341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr16:57199200..57199210,- | |||
}} |
Revision as of 12:56, 13 September 2013
Short description: | p@chr16:57199200..57199210, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:57199200..57199210, - |
Coexpression cluster: | MCL_coexpression_mm9:457 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.69e-33 | 3 |
defensive cell | 8.03e-15 | 7 |
epithelial cell | 4.33e-11 | 25 |
brush border epithelial cell | 4.75e-08 | 6 |
gut absorptive cell | 4.75e-08 | 6 |
enterocyte | 4.75e-08 | 6 |
columnar/cuboidal epithelial cell | 5.00e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 6.57e-23 | 2 |
mucosa-associated lymphoid tissue | 6.57e-23 | 2 |
lymphoid tissue | 6.57e-23 | 2 |
mucosa | 2.09e-18 | 15 |
lymphoid system | 1.23e-15 | 3 |
egg chamber | 1.55e-12 | 1 |
organ component layer | 1.31e-11 | 24 |
intestinal mucosa | 3.45e-08 | 13 |
wall of intestine | 3.45e-08 | 13 |
gastrointestinal system mucosa | 3.45e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.