FFCP PHASE1:Hg19::chr5:125759038..125759049,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65983|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24911|TSSclassifier=S|UniProt=|association_with_transcript=-48bp_to_ENST00000514932_5end|coexpression_cluster_id=C1274|description=CAGE_peak_7_at_GRAMD3_5end|id=chr5:125759038..125759049,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;6.92e-08;19!CL:0002577;9.03e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,8.98e-08,19;CL:0002577,9.26e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.07e-15!57;UBERON:0005068!4.07e-15!57;UBERON:0006241!4.07e-15!57;UBERON:0007135!4.07e-15!57;UBERON:0001017!6.27e-15!82;UBERON:0005743!1.01e-14!86;UBERON:0004121!1.34e-14!169;UBERON:0000153!4.22e-14!129;UBERON:0007811!4.22e-14!129;UBERON:0002616!4.83e-14!59;UBERON:0000955!1.11e-13!69;UBERON:0006238!1.11e-13!69;UBERON:0000033!1.83e-13!123;UBERON:0000924!2.30e-13!173;UBERON:0006601!2.30e-13!173;UBERON:0000475!1.26e-12!365;UBERON:0003080!2.86e-12!42;UBERON:0000073!3.19e-12!94;UBERON:0001016!3.19e-12!94;UBERON:0002780!8.69e-12!41;UBERON:0001890!8.69e-12!41;UBERON:0006240!8.69e-12!41;UBERON:0000064!1.01e-11!219;UBERON:0000062!3.06e-11!511;UBERON:0007023!4.82e-10!115;UBERON:0005631!2.20e-09!14;UBERON:0000158!2.20e-09!14;UBERON:0003075!2.21e-09!86;UBERON:0007284!2.21e-09!86;UBERON:0001893!5.21e-09!34;UBERON:0002020!6.76e-09!34;UBERON:0003528!6.76e-09!34;UBERON:0002791!1.11e-08!33;UBERON:0003056!1.38e-08!61;UBERON:0001869!1.79e-08!32;UBERON:0002346!4.57e-08!90;UBERON:0002619!6.30e-07!22|ontology_enrichment_uberon_v019=UBERON:0003688;2.19e-11;6!UBERON:0002358;2.19e-11;6!UBERON:0003684;2.19e-11;6!UBERON:0001178;2.19e-11;6!UBERON:0002619;8.95e-10;22!UBERON:0000305;3.42e-09;7!UBERON:0000073;2.00e-08;53!UBERON:0002616;2.00e-08;53!UBERON:0000956;2.97e-08;25!UBERON:0000203;2.97e-08;25!UBERON:0005631;3.58e-08;10!UBERON:0000158;3.58e-08;10!UBERON:0002780;4.36e-08;41!UBERON:0001890;4.36e-08;41!UBERON:0001950;7.58e-08;20!UBERON:0001987;8.00e-08;4!UBERON:0004457;3.27e-07;9!UBERON:0000042;3.27e-07;9!UBERON:0002784;4.60e-07;4!UBERON:0000478;7.42e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.11e-14,56;UBERON:0005068,1.11e-14,56;UBERON:0006241,1.11e-14,56;UBERON:0007135,1.11e-14,56;UBERON:0005631,1.70e-13,14;UBERON:0000158,1.70e-13,14;UBERON:0000073,3.21e-13,53;UBERON:0002616,3.21e-13,53;UBERON:0003688,2.29e-11,6;UBERON:0002358,2.29e-11,6;UBERON:0003684,2.29e-11,6;UBERON:0001178,2.29e-11,6;UBERON:0001017,5.02e-11,81;UBERON:0002780,1.11e-10,41;UBERON:0001890,1.11e-10,41;UBERON:0003080,1.11e-10,41;UBERON:0006240,1.11e-10,41;UBERON:0000955,2.47e-10,68;UBERON:0006238,2.47e-10,68;UBERON:0002619,4.97e-10,22;UBERON:0003075,3.36e-09,82;UBERON:0007284,3.36e-09,82;UBERON:0001016,4.05e-09,89;UBERON:0000305,5.51e-09,7;UBERON:0000956,1.79e-08,25;UBERON:0000203,1.79e-08,25;UBERON:0002346,2.01e-08,86;UBERON:0001950,5.10e-08,20;UBERON:0004871,9.90e-08,8;UBERON:0010371,1.26e-07,104;UBERON:0001987,1.31e-07,4;UBERON:0004340,1.31e-07,4;UBERON:0003528,2.36e-07,34;UBERON:0002020,2.36e-07,34;UBERON:0001893,3.15e-07,34;UBERON:0002784,4.38e-07,4;UBERON:0003056,5.05e-07,61;UBERON:0007023,5.15e-07,114;UBERON:0002791,6.67e-07,32;UBERON:0001869,6.67e-07,32|phase1_expression=6.90377841228115,5.56661362116556,7.18867460889453,8.00586386825043,3.5756887554183,3.48935409640147,0,0,0,0.245733936501509,2.09340350391728,7.20856528029568,6.59417445571134,0,0.662794751455832,0.672325146451775,0,0,0,0.369363174230364,0,0,0.286235987131057,0,0.251085279189606,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,1.21079900526674,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.590129310341499,0.393010762749165,0,0.334372990781356,0.32592226663359,0,0,0.557052284425868,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,1.13441780596881,0.221729397462564,0.175669571386252,0.261958150995425,0.728590576585084,0,0,0,0,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,2.48485975847659,0.379891534993739,1.19168262731897,0,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0.756787138224657,1.15235184896,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0.494533858557114,0,0,0,0,0.277064115484183,0.438977620880838,0.612975591598039,0.300476117813194,0,1.25572744982203,0.427114777637135,0.423863802319124,0.300091096084402,0.309157587715317,0.772921620136887,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_ENST00000514932_5end | |||
|coexpression_cluster_id=C1274 | |||
|description=CAGE_peak_7_at_GRAMD3_5end | |||
|id=chr5:125759038..125759049,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.92e-08;19!CL:0002577;9.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.98e-08,19;CL:0002577,9.26e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.07e-15!57;UBERON:0005068!4.07e-15!57;UBERON:0006241!4.07e-15!57;UBERON:0007135!4.07e-15!57;UBERON:0001017!6.27e-15!82;UBERON:0005743!1.01e-14!86;UBERON:0004121!1.34e-14!169;UBERON:0000153!4.22e-14!129;UBERON:0007811!4.22e-14!129;UBERON:0002616!4.83e-14!59;UBERON:0000955!1.11e-13!69;UBERON:0006238!1.11e-13!69;UBERON:0000033!1.83e-13!123;UBERON:0000924!2.30e-13!173;UBERON:0006601!2.30e-13!173;UBERON:0000475!1.26e-12!365;UBERON:0003080!2.86e-12!42;UBERON:0000073!3.19e-12!94;UBERON:0001016!3.19e-12!94;UBERON:0002780!8.69e-12!41;UBERON:0001890!8.69e-12!41;UBERON:0006240!8.69e-12!41;UBERON:0000064!1.01e-11!219;UBERON:0000062!3.06e-11!511;UBERON:0007023!4.82e-10!115;UBERON:0005631!2.20e-09!14;UBERON:0000158!2.20e-09!14;UBERON:0003075!2.21e-09!86;UBERON:0007284!2.21e-09!86;UBERON:0001893!5.21e-09!34;UBERON:0002020!6.76e-09!34;UBERON:0003528!6.76e-09!34;UBERON:0002791!1.11e-08!33;UBERON:0003056!1.38e-08!61;UBERON:0001869!1.79e-08!32;UBERON:0002346!4.57e-08!90;UBERON:0002619!6.30e-07!22 | |||
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| |||
|short_description=p7@GRAMD3 | |||
}} |
Revision as of 12:56, 13 September 2013
Short description: | p7@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_GRAMD3_5end |
Coexpression cluster: | C1274_Preadipocyte_Olfactory_Adipocyte_amniotic_serous_spindle_mesodermal |
Association with transcript: | -48bp_to_ENST00000514932_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.98e-08 | 19 |
placental epithelial cell | 9.26e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.