FFCP PHASE1:Mm9::chr16:31455206..31455220,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=132|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:31455206..31455220,+|id=chr16:31455206..31455220,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.85e-09!59;UBERON:0000945!1.46e-07!16;UBERON:0010039!1.46e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.82e-24,47;UBERON:0000160,7.78e-13,31;UBERON:0000945,7.65e-12,16;UBERON:0010039,7.65e-12,16;UBERON:0004921,1.97e-09,114;UBERON:0001007,3.61e-09,116;UBERON:0001555,3.61e-09,116;UBERON:0007026,3.61e-09,116;UBERON:0004119,6.50e-09,118;UBERON:0000925,6.50e-09,118;UBERON:0006595,6.50e-09,118;UBERON:0000162,3.10e-08,3;UBERON:0001353,3.10e-08,3;UBERON:0000163,3.10e-08,3;UBERON:0006866,3.10e-08,3;UBERON:0001046,3.10e-08,3;UBERON:0000164,3.10e-08,3;UBERON:0000931,3.10e-08,3|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.30559649555362,0.589257170947335,0,0.372798891650601,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,0.494389935468748,1.15679485535929,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.870848794270651,0.252722758433675,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,2.3800550999719,0,0,0.902072229254653,1.00841762311671,3.33567065767305,3.42406127002606,5.69434873853414,3.95277491337626,3.51869292320377,5.96869416123452,6.04388670069272,4.49409704327111,6.26800344636613,3.58454291857861,0,0,0,0,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0,0.318909537314974,0.983179888294428,0.863424909329478,0.433947175744535,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0.307435147943927,0.775284879504663,0,0,4.74055136903724,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,3.74898276693435,0.98931751764888,0,0,0.119372344003136,0.328281799490123,3.78925087618806,0,0.170870880797853,0.412773735926445,0,0,0.546776910884101,0.457556346413045,0,0,0,9.54670618015114,0,1.01659733563424,2.26811215725783,3.13632444021703,6.11415178489297,14.4304850631758,9.6704543198643,15.4436005770577,7.90651337079936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,51.9680007946592,6.56888664079137,2.19781949120718,1.2862102744744,3.51100472824754,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,1.33348036680969,0.824140228955577,0,0.758091635291392,0,0.754505365544305,0.187283014939765,0.384150914429216,0.574354689556133,0,0.811190281613988,0.77163688185482,0.412085900803307,0,1.02860775715625,0.532427418478012,0.476872379894642,1.0174249164263,0.564656282491984,0.507687647350059,0.365855945745545,0,0.679020569229309,1.68342681497322,0.237270036248348,0.29551344712669,0,0.154936841185966,0.771626443924566,0,1.40358965067245,0.429742108096597,0,0,0.231867835620421|short_description=p@chr16:31455206..31455220,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=132 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:31455206..31455220,+ | |||
|id=chr16:31455206..31455220,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.85e-09!59;UBERON:0000945!1.46e-07!16;UBERON:0010039!1.46e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.82e-24,47;UBERON:0000160,7.78e-13,31;UBERON:0000945,7.65e-12,16;UBERON:0010039,7.65e-12,16;UBERON:0004921,1.97e-09,114;UBERON:0001007,3.61e-09,116;UBERON:0001555,3.61e-09,116;UBERON:0007026,3.61e-09,116;UBERON:0004119,6.50e-09,118;UBERON:0000925,6.50e-09,118;UBERON:0006595,6.50e-09,118;UBERON:0000162,3.10e-08,3;UBERON:0001353,3.10e-08,3;UBERON:0000163,3.10e-08,3;UBERON:0006866,3.10e-08,3;UBERON:0001046,3.10e-08,3;UBERON:0000164,3.10e-08,3;UBERON:0000931,3.10e-08,3 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.30559649555362,0.589257170947335,0,0.372798891650601,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,0.494389935468748,1.15679485535929,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.870848794270651,0.252722758433675,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,2.3800550999719,0,0,0.902072229254653,1.00841762311671,3.33567065767305,3.42406127002606,5.69434873853414,3.95277491337626,3.51869292320377,5.96869416123452,6.04388670069272,4.49409704327111,6.26800344636613,3.58454291857861,0,0,0,0,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0,0.318909537314974,0.983179888294428,0.863424909329478,0.433947175744535,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0.307435147943927,0.775284879504663,0,0,4.74055136903724,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,3.74898276693435,0.98931751764888,0,0,0.119372344003136,0.328281799490123,3.78925087618806,0,0.170870880797853,0.412773735926445,0,0,0.546776910884101,0.457556346413045,0,0,0,9.54670618015114,0,1.01659733563424,2.26811215725783,3.13632444021703,6.11415178489297,14.4304850631758,9.6704543198643,15.4436005770577,7.90651337079936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,51.9680007946592,6.56888664079137,2.19781949120718,1.2862102744744,3.51100472824754,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,1.33348036680969,0.824140228955577,0,0.758091635291392,0,0.754505365544305,0.187283014939765,0.384150914429216,0.574354689556133,0,0.811190281613988,0.77163688185482,0.412085900803307,0,1.02860775715625,0.532427418478012,0.476872379894642,1.0174249164263,0.564656282491984,0.507687647350059,0.365855945745545,0,0.679020569229309,1.68342681497322,0.237270036248348,0.29551344712669,0,0.154936841185966,0.771626443924566,0,1.40358965067245,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p@chr16:31455206..31455220,+ | |||
}} |
Revision as of 12:24, 13 September 2013
Short description: | p@chr16:31455206..31455220, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:31455206..31455220, + |
Coexpression cluster: | MCL_coexpression_mm9:132 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 8.82e-24 | 47 |
intestine | 7.78e-13 | 31 |
stomach | 7.65e-12 | 16 |
food storage organ | 7.65e-12 | 16 |
subdivision of digestive tract | 1.97e-09 | 114 |
digestive system | 3.61e-09 | 116 |
digestive tract | 3.61e-09 | 116 |
primitive gut | 3.61e-09 | 116 |
endoderm-derived structure | 6.50e-09 | 118 |
endoderm | 6.50e-09 | 118 |
presumptive endoderm | 6.50e-09 | 118 |
cloaca | 3.10e-08 | 3 |
anal region | 3.10e-08 | 3 |
embryonic cloaca | 3.10e-08 | 3 |
terminal part of digestive tract | 3.10e-08 | 3 |
hindgut | 3.10e-08 | 3 |
primitive urogenital sinus | 3.10e-08 | 3 |
proctodeum | 3.10e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.