FFCP PHASE1:Hg19::chr4:88904052..88904068,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C455|description=CAGE_peak_at_chr4:88904052..88904068,+|id=chr4:88904052..88904068,+|ontology_enrichment_celltype=CL:0000235!4.66e-11!10|ontology_enrichment_celltype_v019=CL:0000235;2.40e-54;6!CL:0000473;4.47e-07;39!CL:0000234;4.47e-07;39!CL:0002149;6.10e-07;6!CL:0002255;6.10e-07;6|ontology_enrichment_celltype_v019_2=CL:0000235,6.39e-54,6;CL:0002149,4.00e-07,6;CL:0002255,4.00e-07,6|ontology_enrichment_development_v019=UBERON:0006241;5.13e-13;3!UBERON:0003057;5.13e-13;3|ontology_enrichment_disease=DOID:4468!3.66e-07!2|ontology_enrichment_disease_v019=DOID:3001;6.10e-07;6|ontology_enrichment_disease_v019_2=DOID:3001,4.00e-07,6|ontology_enrichment_uberon=UBERON:0001049!1.49e-27!57;UBERON:0005068!1.49e-27!57;UBERON:0006241!1.49e-27!57;UBERON:0007135!1.49e-27!57;UBERON:0002616!8.57e-20!59;UBERON:0007023!6.64e-19!115;UBERON:0001017!2.00e-18!82;UBERON:0000073!1.16e-17!94;UBERON:0001016!1.16e-17!94;UBERON:0000955!1.94e-17!69;UBERON:0006238!1.94e-17!69;UBERON:0003075!1.98e-17!86;UBERON:0007284!1.98e-17!86;UBERON:0005743!2.93e-17!86;UBERON:0002346!2.38e-16!90;UBERON:0002780!7.02e-16!41;UBERON:0001890!7.02e-16!41;UBERON:0006240!7.02e-16!41;UBERON:0002308!7.74e-16!9;UBERON:0000125!7.74e-16!9;UBERON:0003080!2.07e-15!42;UBERON:0002020!3.08e-15!34;UBERON:0003528!3.08e-15!34;UBERON:0003076!9.63e-15!15;UBERON:0003057!9.63e-15!15;UBERON:0002298!5.92e-13!8;UBERON:0002420!2.01e-11!9;UBERON:0007245!2.01e-11!9;UBERON:0010009!2.01e-11!9;UBERON:0010011!2.01e-11!9;UBERON:0000454!2.01e-11!9;UBERON:0002791!2.30e-11!33;UBERON:0001893!5.91e-11!34;UBERON:0003056!1.22e-10!61;UBERON:0006331!1.33e-10!3;UBERON:0009663!1.88e-10!7;UBERON:0002240!4.38e-10!3;UBERON:0001869!8.04e-10!32;UBERON:0000988!8.97e-10!3;UBERON:0000153!3.89e-09!129;UBERON:0007811!3.89e-09!129;UBERON:0000033!5.66e-09!123;UBERON:0002771!6.19e-09!3;UBERON:0001871!1.56e-08!7;UBERON:0004733!2.35e-08!12;UBERON:0002028!2.35e-08!12;UBERON:0007277!2.35e-08!12;UBERON:0004732!1.18e-07!13;UBERON:0002148!1.25e-07!2;UBERON:0009662!1.25e-07!2;UBERON:0004121!1.61e-07!169;UBERON:0001897!2.78e-07!2;UBERON:0001894!2.98e-07!7;UBERON:0006222!2.98e-07!7;UBERON:0000924!3.39e-07!173;UBERON:0006601!3.39e-07!173;UBERON:0001875!3.88e-07!2;UBERON:0006514!3.88e-07!2;UBERON:0000025!4.00e-07!194;UBERON:0001954!4.00e-07!2;UBERON:0003022!4.00e-07!2;UBERON:0002421!4.00e-07!2;UBERON:0002600!4.00e-07!2|ontology_enrichment_uberon_v019=UBERON:0002148;1.97e-19;2!UBERON:0006331;1.97e-19;2!UBERON:0009662;1.97e-19;2!UBERON:0000125;1.84e-16;9!UBERON:0002308;1.84e-16;9!UBERON:0000988;2.78e-13;3!UBERON:0002240;5.13e-13;3!UBERON:0005174;5.13e-13;3!UBERON:0001137;5.13e-13;3!UBERON:0002038;2.17e-10;1!UBERON:0009661;2.17e-10;1!UBERON:0002950;2.17e-10;1!UBERON:0001891;2.17e-10;1!UBERON:0002784;5.44e-10;4!UBERON:0002680;9.70e-10;9!UBERON:0001895;9.70e-10;9!UBERON:0004733;2.00e-07;12!UBERON:0002028;2.00e-07;12!UBERON:0002298;4.51e-07;6!UBERON:0004732;6.89e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0002148,1.03e-19,2;UBERON:0006331,1.03e-19,2;UBERON:0009662,1.03e-19,2;UBERON:0000125,1.24e-16,9;UBERON:0002308,1.24e-16,9;UBERON:0003076,3.73e-15,15;UBERON:0003057,3.73e-15,15;UBERON:0001049,1.95e-14,56;UBERON:0005068,1.95e-14,56;UBERON:0006241,1.95e-14,56;UBERON:0007135,1.95e-14,56;UBERON:0000988,1.81e-13,3;UBERON:0002240,6.17e-13,3;UBERON:0005174,6.17e-13,3;UBERON:0001137,6.17e-13,3;UBERON:0002038,1.08e-10,1;UBERON:0009661,1.08e-10,1;UBERON:0002950,1.08e-10,1;UBERON:0001891,1.08e-10,1;UBERON:0009616,1.08e-10,1;UBERON:0010286,1.08e-10,1;UBERON:0002784,6.25e-10,4;UBERON:0002680,7.31e-10,9;UBERON:0001895,7.31e-10,9;UBERON:0010092,7.31e-10,9;UBERON:0000073,8.09e-10,53;UBERON:0002616,8.09e-10,53;UBERON:0001017,1.91e-09,81;UBERON:0003075,1.91e-09,82;UBERON:0007284,1.91e-09,82;UBERON:0002346,6.10e-09,86;UBERON:0001016,2.25e-08,89;UBERON:0004733,1.63e-07,12;UBERON:0002028,1.63e-07,12;UBERON:0007277,1.63e-07,12;UBERON:0000955,2.42e-07,68;UBERON:0006238,2.42e-07,68;UBERON:0002298,3.66e-07,6;UBERON:0010371,3.77e-07,104;UBERON:0004732,5.69e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,1.29818957461873,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,2.10603838625314,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.506771274296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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_at_chr4:88904052..88904068,+ | |||
|id=chr4:88904052..88904068,+ | |||
|ontology_enrichment_celltype=CL:0000235!4.66e-11!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.40e-54;6!CL:0000473;4.47e-07;39!CL:0000234;4.47e-07;39!CL:0002149;6.10e-07;6!CL:0002255;6.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.39e-54,6;CL:0002149,4.00e-07,6;CL:0002255,4.00e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.13e-13;3!UBERON:0003057;5.13e-13;3 | |||
|ontology_enrichment_disease=DOID:4468!3.66e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3001;6.10e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,4.00e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-27!57;UBERON:0005068!1.49e-27!57;UBERON:0006241!1.49e-27!57;UBERON:0007135!1.49e-27!57;UBERON:0002616!8.57e-20!59;UBERON:0007023!6.64e-19!115;UBERON:0001017!2.00e-18!82;UBERON:0000073!1.16e-17!94;UBERON:0001016!1.16e-17!94;UBERON:0000955!1.94e-17!69;UBERON:0006238!1.94e-17!69;UBERON:0003075!1.98e-17!86;UBERON:0007284!1.98e-17!86;UBERON:0005743!2.93e-17!86;UBERON:0002346!2.38e-16!90;UBERON:0002780!7.02e-16!41;UBERON:0001890!7.02e-16!41;UBERON:0006240!7.02e-16!41;UBERON:0002308!7.74e-16!9;UBERON:0000125!7.74e-16!9;UBERON:0003080!2.07e-15!42;UBERON:0002020!3.08e-15!34;UBERON:0003528!3.08e-15!34;UBERON:0003076!9.63e-15!15;UBERON:0003057!9.63e-15!15;UBERON:0002298!5.92e-13!8;UBERON:0002420!2.01e-11!9;UBERON:0007245!2.01e-11!9;UBERON:0010009!2.01e-11!9;UBERON:0010011!2.01e-11!9;UBERON:0000454!2.01e-11!9;UBERON:0002791!2.30e-11!33;UBERON:0001893!5.91e-11!34;UBERON:0003056!1.22e-10!61;UBERON:0006331!1.33e-10!3;UBERON:0009663!1.88e-10!7;UBERON:0002240!4.38e-10!3;UBERON:0001869!8.04e-10!32;UBERON:0000988!8.97e-10!3;UBERON:0000153!3.89e-09!129;UBERON:0007811!3.89e-09!129;UBERON:0000033!5.66e-09!123;UBERON:0002771!6.19e-09!3;UBERON:0001871!1.56e-08!7;UBERON:0004733!2.35e-08!12;UBERON:0002028!2.35e-08!12;UBERON:0007277!2.35e-08!12;UBERON:0004732!1.18e-07!13;UBERON:0002148!1.25e-07!2;UBERON:0009662!1.25e-07!2;UBERON:0004121!1.61e-07!169;UBERON:0001897!2.78e-07!2;UBERON:0001894!2.98e-07!7;UBERON:0006222!2.98e-07!7;UBERON:0000924!3.39e-07!173;UBERON:0006601!3.39e-07!173;UBERON:0001875!3.88e-07!2;UBERON:0006514!3.88e-07!2;UBERON:0000025!4.00e-07!194;UBERON:0001954!4.00e-07!2;UBERON:0003022!4.00e-07!2;UBERON:0002421!4.00e-07!2;UBERON:0002600!4.00e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;1.97e-19;2!UBERON:0006331;1.97e-19;2!UBERON:0009662;1.97e-19;2!UBERON:0000125;1.84e-16;9!UBERON:0002308;1.84e-16;9!UBERON:0000988;2.78e-13;3!UBERON:0002240;5.13e-13;3!UBERON:0005174;5.13e-13;3!UBERON:0001137;5.13e-13;3!UBERON:0002038;2.17e-10;1!UBERON:0009661;2.17e-10;1!UBERON:0002950;2.17e-10;1!UBERON:0001891;2.17e-10;1!UBERON:0002784;5.44e-10;4!UBERON:0002680;9.70e-10;9!UBERON:0001895;9.70e-10;9!UBERON:0004733;2.00e-07;12!UBERON:0002028;2.00e-07;12!UBERON:0002298;4.51e-07;6!UBERON:0004732;6.89e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,1.03e-19,2;UBERON:0006331,1.03e-19,2;UBERON:0009662,1.03e-19,2;UBERON:0000125,1.24e-16,9;UBERON:0002308,1.24e-16,9;UBERON:0003076,3.73e-15,15;UBERON:0003057,3.73e-15,15;UBERON:0001049,1.95e-14,56;UBERON:0005068,1.95e-14,56;UBERON:0006241,1.95e-14,56;UBERON:0007135,1.95e-14,56;UBERON:0000988,1.81e-13,3;UBERON:0002240,6.17e-13,3;UBERON:0005174,6.17e-13,3;UBERON:0001137,6.17e-13,3;UBERON:0002038,1.08e-10,1;UBERON:0009661,1.08e-10,1;UBERON:0002950,1.08e-10,1;UBERON:0001891,1.08e-10,1;UBERON:0009616,1.08e-10,1;UBERON:0010286,1.08e-10,1;UBERON:0002784,6.25e-10,4;UBERON:0002680,7.31e-10,9;UBERON:0001895,7.31e-10,9;UBERON:0010092,7.31e-10,9;UBERON:0000073,8.09e-10,53;UBERON:0002616,8.09e-10,53;UBERON:0001017,1.91e-09,81;UBERON:0003075,1.91e-09,82;UBERON:0007284,1.91e-09,82;UBERON:0002346,6.10e-09,86;UBERON:0001016,2.25e-08,89;UBERON:0004733,1.63e-07,12;UBERON:0002028,1.63e-07,12;UBERON:0007277,1.63e-07,12;UBERON:0000955,2.42e-07,68;UBERON:0006238,2.42e-07,68;UBERON:0002298,3.66e-07,6;UBERON:0010371,3.77e-07,104;UBERON:0004732,5.69e-07,13 | |||
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|short_description=p@chr4:88904052..88904068,+ | |||
}} |
Revision as of 12:15, 13 September 2013
Short description: | p@chr4:88904052..88904068, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:88904052..88904068, + |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.39e-54 | 6 |
epithelial cell of uterus | 4.00e-07 | 6 |
stromal cell of endometrium | 4.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 4.00e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.