FFCP PHASE1:Mm9::chr16:21650274..21650286,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=186|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:21650274..21650286,-|id=chr16:21650274..21650286,-|ontology_enrichment_celltype=CL:0000117!6.03e-08!23;CL:0000337!6.03e-08!23;CL:0000540!6.26e-08!33;CL:0000047!6.26e-08!33;CL:0000031!6.26e-08!33;CL:0000404!6.26e-08!33|ontology_enrichment_celltype_v019_2=CL:0000540,4.80e-10,33;CL:0000047,4.80e-10,33;CL:0000031,4.80e-10,33;CL:0000404,4.80e-10,33;CL:0000117,7.20e-10,23;CL:0000337,7.20e-10,23;CL:0000393,4.07e-08,39;CL:0000211,4.07e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.57e-14!63;UBERON:0002346!1.26e-13!71;UBERON:0003075!1.26e-13!71;UBERON:0007284!1.26e-13!71;UBERON:0001017!1.26e-13!73;UBERON:0005743!1.26e-13!73;UBERON:0003056!2.39e-13!49;UBERON:0000073!5.03e-13!75;UBERON:0001016!5.03e-13!75;UBERON:0004121!1.07e-12!102;UBERON:0000924!1.07e-12!102;UBERON:0006601!1.07e-12!102;UBERON:0001049!1.46e-11!52;UBERON:0005068!1.46e-11!52;UBERON:0006241!1.46e-11!52;UBERON:0007135!1.46e-11!52;UBERON:0000025!2.07e-11!114;UBERON:0000955!2.32e-11!50;UBERON:0006238!2.32e-11!50;UBERON:0002616!4.49e-11!49;UBERON:0002020!9.57e-11!34;UBERON:0004111!1.08e-10!122;UBERON:0003080!1.97e-10!40;UBERON:0002780!3.23e-10!39;UBERON:0001890!3.23e-10!39;UBERON:0006240!3.23e-10!39;UBERON:0002791!7.57e-09!29;UBERON:0003528!7.57e-09!29;UBERON:0001893!7.57e-09!29;UBERON:0000468!1.78e-08!333;UBERON:0000922!2.55e-08!328;UBERON:0002021!5.61e-07!10;UBERON:0000411!5.61e-07!10;UBERON:0001950!5.61e-07!10;UBERON:0007811!6.88e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.79e-16,92;UBERON:0003056,9.44e-15,49;UBERON:0002346,2.24e-14,64;UBERON:0003075,2.24e-14,64;UBERON:0007284,2.24e-14,64;UBERON:0001017,7.87e-14,73;UBERON:0000073,1.18e-13,54;UBERON:0004121,1.57e-13,95;UBERON:0000924,1.57e-13,95;UBERON:0006601,1.57e-13,95;UBERON:0010371,2.99e-13,73;UBERON:0001016,6.20e-13,75;UBERON:0002020,8.53e-13,34;UBERON:0003080,1.42e-11,40;UBERON:0001049,1.64e-11,52;UBERON:0005068,1.64e-11,52;UBERON:0006241,1.64e-11,52;UBERON:0007135,1.64e-11,52;UBERON:0002780,2.60e-11,39;UBERON:0001890,2.60e-11,39;UBERON:0006240,2.60e-11,39;UBERON:0000025,6.96e-11,114;UBERON:0003528,1.88e-10,29;UBERON:0002791,1.88e-10,29;UBERON:0001893,1.88e-10,29;UBERON:0000955,3.64e-10,47;UBERON:0006238,3.64e-10,47;UBERON:0004111,5.80e-10,122;UBERON:0002616,7.77e-10,46;UBERON:0002021,2.81e-08,10;UBERON:0000411,2.81e-08,10;UBERON:0001950,2.81e-08,10;UBERON:0000956,8.12e-07,21;UBERON:0001869,8.12e-07,21;UBERON:0000203,8.12e-07,21|phase1_expression=3.84357233051505,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.183546752161682,0.782391344348039,0.436050312760893,0.439372365468944,0.194429899074283,0.979904951377538,0,0,0,0,1.02903774414379,0.286533439938757,1.54701627683233,1.82084814773638,3.1739458756322,3.1691570175309,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,2.07379224616955,1.75507719831198,2.10324961351382,1.71390590642282,2.20868540951614,1.22490799214954,2.20444583341944,0,3.30347642998166,2.42605942361857,4.30098293117482,1.31886287730194,4.39140689291566,2.6045668527838,1.67509799400829,2.25105044012672,4.88954392885792,6.77645746589436,2.13557521198654,2.79599168737951,0.075726193333184,0.755715601067855,0.289864488701678,0,0.679971333707751,0,1.29955283489534,0,0.421333260395256,2.21559419351475,1.29893002301434,1.7666978725517,2.11265129665021,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0,0.148442139064825,0.867426633830679,0.608930956624282,0.691846491768175,1.3565037649736,1.05829836422134,1.25666591329675,0,0.289198713839823,0,2.58826959915855,0.883366073841574,3.39412677194655,0,1.46390398505774,1.46612694769419,0,0,0,0,1.64769703345305,2.28750301409313,5.90575454930463,1.21677024134594,1.53429274398198,1.24672826735736,1.78465389374533,2.24046600470696,0.746441823660558,0.758168275301024,1.05220927943237,1.43132487258974,0.689706313300419,1.62055916824814,7.38453607395004,4.01415344992834,6.40568601424249,2.81105173679186,8.53721123438752,0.646703978798527,0.378212160335639,0.703804496655795,0.43839146485515,3.05851974148158,1.0447564995665,1.02891068203972,1.79130840136644,0,0,0,0.828503090142008,1.40715635988658,1.98068267607116,1.18372367792605,2.36117078096885,5.707883176833,5.58081467400979,1.87791380979733,1.86824547787471,2.96207729844265,6.40253109908471,0.729619285912702,0.438599962275997,2.85415149878366,0.939444931322602,0.630869845692382,4.73361216944708,0,0.264450566663544,1.49301775374664,2.78684006232526,0.128867461322093,0.605050573870028,0.889512175379481,0,0.474529061544512,1.31759163779209,2.01068167040216,0.994782360205754,1.55971269695296,0,1.29682829924817,0,0.189667900953082,1.37098215131675,1.1270773567308,2.44381593414377,1.16371492300575,1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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=186 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:21650274..21650286,- | |||
|id=chr16:21650274..21650286,- | |||
|ontology_enrichment_celltype=CL:0000117!6.03e-08!23;CL:0000337!6.03e-08!23;CL:0000540!6.26e-08!33;CL:0000047!6.26e-08!33;CL:0000031!6.26e-08!33;CL:0000404!6.26e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.80e-10,33;CL:0000047,4.80e-10,33;CL:0000031,4.80e-10,33;CL:0000404,4.80e-10,33;CL:0000117,7.20e-10,23;CL:0000337,7.20e-10,23;CL:0000393,4.07e-08,39;CL:0000211,4.07e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.57e-14!63;UBERON:0002346!1.26e-13!71;UBERON:0003075!1.26e-13!71;UBERON:0007284!1.26e-13!71;UBERON:0001017!1.26e-13!73;UBERON:0005743!1.26e-13!73;UBERON:0003056!2.39e-13!49;UBERON:0000073!5.03e-13!75;UBERON:0001016!5.03e-13!75;UBERON:0004121!1.07e-12!102;UBERON:0000924!1.07e-12!102;UBERON:0006601!1.07e-12!102;UBERON:0001049!1.46e-11!52;UBERON:0005068!1.46e-11!52;UBERON:0006241!1.46e-11!52;UBERON:0007135!1.46e-11!52;UBERON:0000025!2.07e-11!114;UBERON:0000955!2.32e-11!50;UBERON:0006238!2.32e-11!50;UBERON:0002616!4.49e-11!49;UBERON:0002020!9.57e-11!34;UBERON:0004111!1.08e-10!122;UBERON:0003080!1.97e-10!40;UBERON:0002780!3.23e-10!39;UBERON:0001890!3.23e-10!39;UBERON:0006240!3.23e-10!39;UBERON:0002791!7.57e-09!29;UBERON:0003528!7.57e-09!29;UBERON:0001893!7.57e-09!29;UBERON:0000468!1.78e-08!333;UBERON:0000922!2.55e-08!328;UBERON:0002021!5.61e-07!10;UBERON:0000411!5.61e-07!10;UBERON:0001950!5.61e-07!10;UBERON:0007811!6.88e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.79e-16,92;UBERON:0003056,9.44e-15,49;UBERON:0002346,2.24e-14,64;UBERON:0003075,2.24e-14,64;UBERON:0007284,2.24e-14,64;UBERON:0001017,7.87e-14,73;UBERON:0000073,1.18e-13,54;UBERON:0004121,1.57e-13,95;UBERON:0000924,1.57e-13,95;UBERON:0006601,1.57e-13,95;UBERON:0010371,2.99e-13,73;UBERON:0001016,6.20e-13,75;UBERON:0002020,8.53e-13,34;UBERON:0003080,1.42e-11,40;UBERON:0001049,1.64e-11,52;UBERON:0005068,1.64e-11,52;UBERON:0006241,1.64e-11,52;UBERON:0007135,1.64e-11,52;UBERON:0002780,2.60e-11,39;UBERON:0001890,2.60e-11,39;UBERON:0006240,2.60e-11,39;UBERON:0000025,6.96e-11,114;UBERON:0003528,1.88e-10,29;UBERON:0002791,1.88e-10,29;UBERON:0001893,1.88e-10,29;UBERON:0000955,3.64e-10,47;UBERON:0006238,3.64e-10,47;UBERON:0004111,5.80e-10,122;UBERON:0002616,7.77e-10,46;UBERON:0002021,2.81e-08,10;UBERON:0000411,2.81e-08,10;UBERON:0001950,2.81e-08,10;UBERON:0000956,8.12e-07,21;UBERON:0001869,8.12e-07,21;UBERON:0000203,8.12e-07,21 | |||
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.183546752161682,0.782391344348039,0.436050312760893,0.439372365468944,0.194429899074283,0.979904951377538,0,0,0,0,1.02903774414379,0.286533439938757,1.54701627683233,1.82084814773638,3.1739458756322,3.1691570175309,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,2.07379224616955,1.75507719831198,2.10324961351382,1.71390590642282,2.20868540951614,1.22490799214954,2.20444583341944,0,3.30347642998166,2.42605942361857,4.30098293117482,1.31886287730194,4.39140689291566,2.6045668527838,1.67509799400829,2.25105044012672,4.88954392885792,6.77645746589436,2.13557521198654,2.79599168737951,0.075726193333184,0.755715601067855,0.289864488701678,0,0.679971333707751,0,1.29955283489534,0,0.421333260395256,2.21559419351475,1.29893002301434,1.7666978725517,2.11265129665021,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0,0.148442139064825,0.867426633830679,0.608930956624282,0.691846491768175,1.3565037649736,1.05829836422134,1.25666591329675,0,0.289198713839823,0,2.58826959915855,0.883366073841574,3.39412677194655,0,1.46390398505774,1.46612694769419,0,0,0,0,1.64769703345305,2.28750301409313,5.90575454930463,1.21677024134594,1.53429274398198,1.24672826735736,1.78465389374533,2.24046600470696,0.746441823660558,0.758168275301024,1.05220927943237,1.43132487258974,0.689706313300419,1.62055916824814,7.38453607395004,4.01415344992834,6.40568601424249,2.81105173679186,8.53721123438752,0.646703978798527,0.378212160335639,0.703804496655795,0.43839146485515,3.05851974148158,1.0447564995665,1.02891068203972,1.79130840136644,0,0,0,0.828503090142008,1.40715635988658,1.98068267607116,1.18372367792605,2.36117078096885,5.707883176833,5.58081467400979,1.87791380979733,1.86824547787471,2.96207729844265,6.40253109908471,0.729619285912702,0.438599962275997,2.85415149878366,0.939444931322602,0.630869845692382,4.73361216944708,0,0.264450566663544,1.49301775374664,2.78684006232526,0.128867461322093,0.605050573870028,0.889512175379481,0,0.474529061544512,1.31759163779209,2.01068167040216,0.994782360205754,1.55971269695296,0,1.29682829924817,0,0.189667900953082,1.37098215131675,1.1270773567308,2.44381593414377,1.16371492300575,1.19230893813542,1.01178459398812,3.39503340353085,4.39596437955849,0.740382983530803,0,0.166845105716094,0,0,0,0,0.25462585178142,0,1.45921704097532,2.47105271869273,33.0666875012915,1.11642284300551,1.5601883655728,0.252578877947112,0.538192240565737,0.964887042726734,1.29327233116623,0.189491411770485,0.325929952884052,2.37643120085263,3.05097322775053,0.335012514883631,0.952174563544055,2.34160377429359,2.20689201748667,5.97954662051692,5.74037167166954,6.06294264448231,7.25276923836761,2.60368305446721,4.52373851817817,3.26343410291226,0,0,0.642202359951168,0.468846746368813,0.163934945376675,1.00988370881749,0.315508219416257,1.17131623288992,1.29254038639679,1.67278158566786,1.11399337041197,0,4.04810701674894,1.16902343164525,1.18586333383957,1.92792789853084,0.567760340833074,1.78065603667255,1.30309567482861,0.494910368917606,0,1.69946445308487,0.906970670894253,1.32023555829129,0,0.307435147943927,0.258428293168221,1.09060118843252,1.06949213515416,1.26414703174326,0,0,0.680879211507576,1.98067203434441,1.4229455216103,0.857348140126369,1.41872186913819,2.67553226403106,1.97458824722545,1.522324745573,0.23467170806371,0,0.220528398054962,0,1.29171541356724,0.301564624640779,0.835606408021955,1.31312719796049,0.582961673259701,0.927126510052548,0.170870880797853,0.619160603889667,0.925972636848558,0.941842285023455,0.410082683163076,0,0,0.139951452323658,0,2.86401185404534,0.158167996790568,1.01659733563424,2.26811215725783,2.50905955217362,1.09181281873089,3.10187996685088,1.32245529160537,1.83229159388821,0.777689839750757,0,0,0.448549638131936,0.496375471371293,0.972255941720238,0.774958940866387,4.73077151374179,4.10750335260139,1.3020438484395,0.419437377702843,1.20792060413003,0.288030006257865,0.316011120628178,0.202725215290164,0.513554785824136,0.389762468933385,0.537080087002444,0.39736270956253,0.360586348559907,0.295379054349154,0.302899349844443,0.762068066549998,0.504130925684203,0.682205165178267,0.673482891482306,0.584384510907845,0.453460767230423,0,0,0,0.579568782096571,0.563047426353546,1.64836461840539,0.214368379079066,0.501572104035363,9.03602948187307,5.52390283808612,10.8850147553485,5.499301834998,2.74033007908257,2.2661816921691,5.40018000185445,4.95353323546643,4.53142408984205,3.10656187051092,1.66059756134683,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0.551530525350042,0.222246727801615,1.03017528619447,0,0.252697211763798,1.52087579934144,0.377252682772152,0.561849044819294,0.89635213366817,0.631790158511746,0.952587382566147,0.927074607558844,0.192909220463705,0.8241718016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| |||
|short_description=p@chr16:21650274..21650286,- | |||
}} |
Revision as of 12:11, 13 September 2013
Short description: | p@chr16:21650274..21650286, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:21650274..21650286, - |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.80e-10 | 33 |
neuronal stem cell | 4.80e-10 | 33 |
neuroblast | 4.80e-10 | 33 |
electrically signaling cell | 4.80e-10 | 33 |
CNS neuron (sensu Vertebrata) | 7.20e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.20e-10 | 23 |
electrically responsive cell | 4.07e-08 | 39 |
electrically active cell | 4.07e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.79e-16 | 92 |
pre-chordal neural plate | 9.44e-15 | 49 |
neurectoderm | 2.24e-14 | 64 |
neural plate | 2.24e-14 | 64 |
presumptive neural plate | 2.24e-14 | 64 |
central nervous system | 7.87e-14 | 73 |
regional part of nervous system | 1.18e-13 | 54 |
ectoderm-derived structure | 1.57e-13 | 95 |
ectoderm | 1.57e-13 | 95 |
presumptive ectoderm | 1.57e-13 | 95 |
ecto-epithelium | 2.99e-13 | 73 |
nervous system | 6.20e-13 | 75 |
gray matter | 8.53e-13 | 34 |
anterior neural tube | 1.42e-11 | 40 |
neural tube | 1.64e-11 | 52 |
neural rod | 1.64e-11 | 52 |
future spinal cord | 1.64e-11 | 52 |
neural keel | 1.64e-11 | 52 |
regional part of forebrain | 2.60e-11 | 39 |
forebrain | 2.60e-11 | 39 |
future forebrain | 2.60e-11 | 39 |
tube | 6.96e-11 | 114 |
brain grey matter | 1.88e-10 | 29 |
regional part of telencephalon | 1.88e-10 | 29 |
telencephalon | 1.88e-10 | 29 |
brain | 3.64e-10 | 47 |
future brain | 3.64e-10 | 47 |
anatomical conduit | 5.80e-10 | 122 |
regional part of brain | 7.77e-10 | 46 |
occipital lobe | 2.81e-08 | 10 |
visual cortex | 2.81e-08 | 10 |
neocortex | 2.81e-08 | 10 |
cerebral cortex | 8.12e-07 | 21 |
cerebral hemisphere | 8.12e-07 | 21 |
pallium | 8.12e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.