FFCP PHASE1:Mm9::chr16:14209676..14209712,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=132|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:14209676..14209712,+|id=chr16:14209676..14209712,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!2.38e-08!57;UBERON:0005153!6.92e-08!17;UBERON:0005409!3.71e-07!59;UBERON:0005156!4.34e-07!26;UBERON:0000990!4.34e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.75e-15,47;UBERON:0004122,1.83e-10,5;UBERON:0000160,1.43e-09,31;UBERON:0003100,8.35e-09,11;UBERON:0004921,3.06e-08,114;UBERON:0004175,4.05e-08,9;UBERON:0001007,5.45e-08,116;UBERON:0001555,5.45e-08,116;UBERON:0007026,5.45e-08,116;UBERON:0004119,9.51e-08,118;UBERON:0000925,9.51e-08,118;UBERON:0006595,9.51e-08,118;UBERON:0005156,1.09e-07,26;UBERON:0000990,1.09e-07,26;UBERON:0000161,2.30e-07,5;UBERON:0000162,2.60e-07,3;UBERON:0001353,2.60e-07,3;UBERON:0000163,2.60e-07,3;UBERON:0006866,2.60e-07,3;UBERON:0001046,2.60e-07,3;UBERON:0000164,2.60e-07,3;UBERON:0000931,2.60e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.494389935468748,1.3013942122792,0,0.161766849947409,0.441683036920787,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,1.42575109390443,1.49288364732112,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0.329119699826961,0.656669856316381,0.648550476366846,0.584799949701329,0.439100230582101,0.134206418760372,0,0,0,2.11560453330835,0.426576501070468,0.464473343720877,0.515469845288373,0.80673409849337,2.89091456998331,3.80451252225118,5.69434873853414,6.58795818896044,7.28872105520782,1.59165177632921,2.72949721966768,2.69645822596266,5.83572734661674,3.18626037206988,0,0,0,0.203651327845314,0.775809948670503,0.420814919341911,0.189709611372772,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0.325929952884052,1.01847051465113,1.17345124144251,0.167506257441816,0.238043640886014,0.390267295715598,0.630540576424764,1.99318220683897,0.318909537314974,0.163863314715738,0.690739927463582,0.723245292907558,0,0,1.96705709207614,2.20749397043786,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0,0.81443479676788,4.94910368917606,0,0,0,0,0,0.307435147943927,1.03371317267288,0.363533729477506,0.356497378384721,3.79244109522979,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,2.20528398054962,0,0.161464426695906,0.301564624640779,0.358117032009409,0.164140899745061,3.49777003955821,0,0,0.206386867963223,0.185194527369712,0.565105371014073,0,0,0,0,0,0,0,0.609958401380546,3.67218158794124,3.55450103224597,5.8957892211468,12.812112906558,15.2082358534618,4.97336289769656,4.53652406521275,3.10669656543463,0,0,0,0.194451188344048,0.774958940866387,0.675824501963113,0.469428954583016,1.5624526181274,1.04859344425711,0.241584120826006,0.864090018773596,0,0,0.205421914329655,0.389762468933385,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.381034033274999,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,18.7393906211225,6.19352168988901,2.19781949120718,1.50057865355346,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.294397840268795,1.02860775715625,0.177475806159338,0.476872379894642,0.145346416632329,0,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0|short_description=p@chr16:14209676..14209712,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=132 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:14209676..14209712,+ | |||
|id=chr16:14209676..14209712,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!2.38e-08!57;UBERON:0005153!6.92e-08!17;UBERON:0005409!3.71e-07!59;UBERON:0005156!4.34e-07!26;UBERON:0000990!4.34e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.75e-15,47;UBERON:0004122,1.83e-10,5;UBERON:0000160,1.43e-09,31;UBERON:0003100,8.35e-09,11;UBERON:0004921,3.06e-08,114;UBERON:0004175,4.05e-08,9;UBERON:0001007,5.45e-08,116;UBERON:0001555,5.45e-08,116;UBERON:0007026,5.45e-08,116;UBERON:0004119,9.51e-08,118;UBERON:0000925,9.51e-08,118;UBERON:0006595,9.51e-08,118;UBERON:0005156,1.09e-07,26;UBERON:0000990,1.09e-07,26;UBERON:0000161,2.30e-07,5;UBERON:0000162,2.60e-07,3;UBERON:0001353,2.60e-07,3;UBERON:0000163,2.60e-07,3;UBERON:0006866,2.60e-07,3;UBERON:0001046,2.60e-07,3;UBERON:0000164,2.60e-07,3;UBERON:0000931,2.60e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.494389935468748,1.3013942122792,0,0.161766849947409,0.441683036920787,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,1.42575109390443,1.49288364732112,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0,0.329119699826961,0.656669856316381,0.648550476366846,0.584799949701329,0.439100230582101,0.134206418760372,0,0,0,2.11560453330835,0.426576501070468,0.464473343720877,0.515469845288373,0.80673409849337,2.89091456998331,3.80451252225118,5.69434873853414,6.58795818896044,7.28872105520782,1.59165177632921,2.72949721966768,2.69645822596266,5.83572734661674,3.18626037206988,0,0,0,0.203651327845314,0.775809948670503,0.420814919341911,0.189709611372772,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0.325929952884052,1.01847051465113,1.17345124144251,0.167506257441816,0.238043640886014,0.390267295715598,0.630540576424764,1.99318220683897,0.318909537314974,0.163863314715738,0.690739927463582,0.723245292907558,0,0,1.96705709207614,2.20749397043786,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0,0.81443479676788,4.94910368917606,0,0,0,0,0,0.307435147943927,1.03371317267288,0.363533729477506,0.356497378384721,3.79244109522979,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,2.20528398054962,0,0.161464426695906,0.301564624640779,0.358117032009409,0.164140899745061,3.49777003955821,0,0,0.206386867963223,0.185194527369712,0.565105371014073,0,0,0,0,0,0,0,0.609958401380546,3.67218158794124,3.55450103224597,5.8957892211468,12.812112906558,15.2082358534618,4.97336289769656,4.53652406521275,3.10669656543463,0,0,0,0.194451188344048,0.774958940866387,0.675824501963113,0.469428954583016,1.5624526181274,1.04859344425711,0.241584120826006,0.864090018773596,0,0,0.205421914329655,0.389762468933385,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.381034033274999,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,18.7393906211225,6.19352168988901,2.19781949120718,1.50057865355346,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.294397840268795,1.02860775715625,0.177475806159338,0.476872379894642,0.145346416632329,0,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr16:14209676..14209712,+ | |||
}} |
Revision as of 12:00, 13 September 2013
Short description: | p@chr16:14209676..14209712, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:14209676..14209712, + |
Coexpression cluster: | MCL_coexpression_mm9:132 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.75e-15 | 47 |
genitourinary system | 1.83e-10 | 5 |
intestine | 1.43e-09 | 31 |
female organism | 8.35e-09 | 11 |
subdivision of digestive tract | 3.06e-08 | 114 |
internal genitalia | 4.05e-08 | 9 |
digestive system | 5.45e-08 | 116 |
digestive tract | 5.45e-08 | 116 |
primitive gut | 5.45e-08 | 116 |
endoderm-derived structure | 9.51e-08 | 118 |
endoderm | 9.51e-08 | 118 |
presumptive endoderm | 9.51e-08 | 118 |
reproductive structure | 1.09e-07 | 26 |
reproductive system | 1.09e-07 | 26 |
orifice | 2.30e-07 | 5 |
cloaca | 2.60e-07 | 3 |
anal region | 2.60e-07 | 3 |
embryonic cloaca | 2.60e-07 | 3 |
terminal part of digestive tract | 2.60e-07 | 3 |
hindgut | 2.60e-07 | 3 |
primitive urogenital sinus | 2.60e-07 | 3 |
proctodeum | 2.60e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.