FFCP PHASE1:Mm9::chr15:94459667..94459701,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320709|HGNC=|MCL_coexpression_id=219|UniProt=Q8BH18|association_with_transcript=51bp_to_ENSMUST00000080141,NM_178789,uc007xjm.1,uc007xjn.1_5end|description=CAGE_peak_1_at_Tmem117_5end|id=chr15:94459667..94459701,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000075,2.08e-07,7;CL:0002563,7.78e-07,9;CL:0002251,7.78e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.80e-09!15;UBERON:0001242!4.25e-08!13;UBERON:0000060!4.25e-08!13;UBERON:0001262!4.25e-08!13;UBERON:0004786!4.25e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.49e-12,15;UBERON:0001242,2.97e-10,13;UBERON:0001262,2.97e-10,13;UBERON:0004786,2.97e-10,13;UBERON:0000160,1.23e-08,31;UBERON:0000485,2.93e-08,11;UBERON:0003350,7.78e-07,9;UBERON:0004808,7.78e-07,9;UBERON:0001277,7.78e-07,9|phase1_expression=5.44506080156299,55.4870898146584,70.5248821053781,18.4503168897166,16.5295590882295,40.6267838026773,36.443571932902,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,59.3571888563539,91.9931217079352,72.9274594426076,91.3215431857239,84.8956656782403,129.025901810878,72.58467737086,101.330843369474,0,0,0,2.88851619751275,1.32987716286794,2.85837098767317,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0.782391344348039,0.218025156380447,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0.606949382578793,0,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.571301968807607,1.10434270475807,0,0.191690942036473,0,3.30347642998166,2.42605942361857,3.07213066512487,0,0.182975287204819,0,2.23346399201105,1.68828783009504,2.90316670775939,0.883885756421003,1.99320353118744,1.1183966749518,2.57469057332826,0.377857800533928,0,0,0,0,0,0,3.5111105032938,0,0,0,20.281452447842,0,0,0,0,0,0,3.4255163915718,0,0.445326417194474,0.173485326766136,1.21786191324856,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,0.884610551949874,7.92657564742305,3.3126227769059,5.33362778448744,11.1835056730873,2.04946557908083,5.65506108396329,29.8884754594052,0.11981512450592,0,0,3.89455662452539,1.37250180845588,0.125654352112864,2.08589184230732,3.06858548796397,4.36354893575076,4.2182728397617,0.407357455401265,2.23932547098167,3.53811861807145,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.816437989815934,0.896796041993948,0.468508622798644,2.06962696591213,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,3.1342694986995,1.4404749548556,0.59710280045548,0,0,0,0.207125772535502,0,0,0.23674473558521,0.590292695242212,0.617068451549513,0,0,0.583826711835847,1.31647879930784,2.62667942526552,4.62092214411378,4.67839959761063,6.58650345873152,4.96563749413376,1.68231958851302,0.102904612379284,6.60837565967596,0.528901133327089,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,16.1339880925134,0.494096864172033,1.00534083520108,0.795825888164603,2.14460495831032,16.178749355776,12.1037307929829,16.7278669533668,0,0.913988100877831,4.50830942692322,2.8511185898344,4.26695471768777,5.75113723100612,19.0341976744014,17.2703873136135,20.095837163696,14.4374681788507,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0.936113019343682,0,0.358794827043824,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0,0.551873492609465,3.37156238974363,4.45404409050372,0,17.6729649043061,0.94652465824877,0.780877488593277,0.215423397732799,0,0,0,0,0,0.395287777946524,2.24924921495265,0.283880170416537,0.178065603667255,0.651547837414304,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,2.04263763452273,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.987294123612726,2.74018454203139,0.23467170806371,0.21183207086382,0.220528398054962,1.48397627647332,2.09903754704677,0.904693873922338,0.477489376012546,0.492422699235184,19.2377352175701,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.09181281873089,0.404593039154462,1.32245529160537,0.785267825952089,6.61036363788144,19.2615187056947,0,1.04661582230785,0.330916980914195,0.388902376688095,0.387479470433193,0.337912250981556,0.58678619322877,0.39061315453185,0.838874755405687,0,1.15212002503146,0,0.202725215290164,0,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0.0962118416403295,0.233753804363138,5.44152920676507,0.221985953374065,0,0.335769232728157,0.772758376128762,1.50145980360946,0,2.57242054894879,0,1.6942555278512,1.84130094602871,1.71868654031819,2.749650917499,2.05524755931193,0.755393897389701,2.70009000092722,2.70192721934532,0.906284817968409,0,0.1037873475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| ||
|EntrezGene=320709 | |||
|HGNC= | |||
|MCL_coexpression_id=219 | |||
|UniProt=Q8BH18 | |||
|association_with_transcript=51bp_to_ENSMUST00000080141,NM_178789,uc007xjm.1,uc007xjn.1_5end | |||
|description=CAGE_peak_1_at_Tmem117_5end | |||
|id=chr15:94459667..94459701,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,2.08e-07,7;CL:0002563,7.78e-07,9;CL:0002251,7.78e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.80e-09!15;UBERON:0001242!4.25e-08!13;UBERON:0000060!4.25e-08!13;UBERON:0001262!4.25e-08!13;UBERON:0004786!4.25e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.49e-12,15;UBERON:0001242,2.97e-10,13;UBERON:0001262,2.97e-10,13;UBERON:0004786,2.97e-10,13;UBERON:0000160,1.23e-08,31;UBERON:0000485,2.93e-08,11;UBERON:0003350,7.78e-07,9;UBERON:0004808,7.78e-07,9;UBERON:0001277,7.78e-07,9 | |||
|phase1_expression=5.44506080156299,55.4870898146584,70.5248821053781,18.4503168897166,16.5295590882295,40.6267838026773,36.443571932902,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,59.3571888563539,91.9931217079352,72.9274594426076,91.3215431857239,84.8956656782403,129.025901810878,72.58467737086,101.330843369474,0,0,0,2.88851619751275,1.32987716286794,2.85837098767317,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0.782391344348039,0.218025156380447,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0.606949382578793,0,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.571301968807607,1.10434270475807,0,0.191690942036473,0,3.30347642998166,2.42605942361857,3.07213066512487,0,0.182975287204819,0,2.23346399201105,1.68828783009504,2.90316670775939,0.883885756421003,1.99320353118744,1.1183966749518,2.57469057332826,0.377857800533928,0,0,0,0,0,0,3.5111105032938,0,0,0,20.281452447842,0,0,0,0,0,0,3.4255163915718,0,0.445326417194474,0.173485326766136,1.21786191324856,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,0.884610551949874,7.92657564742305,3.3126227769059,5.33362778448744,11.1835056730873,2.04946557908083,5.65506108396329,29.8884754594052,0.11981512450592,0,0,3.89455662452539,1.37250180845588,0.125654352112864,2.08589184230732,3.06858548796397,4.36354893575076,4.2182728397617,0.407357455401265,2.23932547098167,3.53811861807145,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.816437989815934,0.896796041993948,0.468508622798644,2.06962696591213,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,3.1342694986995,1.4404749548556,0.59710280045548,0,0,0,0.207125772535502,0,0,0.23674473558521,0.590292695242212,0.617068451549513,0,0,0.583826711835847,1.31647879930784,2.62667942526552,4.62092214411378,4.67839959761063,6.58650345873152,4.96563749413376,1.68231958851302,0.102904612379284,6.60837565967596,0.528901133327089,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,16.1339880925134,0.494096864172033,1.00534083520108,0.795825888164603,2.14460495831032,16.178749355776,12.1037307929829,16.7278669533668,0,0.913988100877831,4.50830942692322,2.8511185898344,4.26695471768777,5.75113723100612,19.0341976744014,17.2703873136135,20.095837163696,14.4374681788507,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0.936113019343682,0,0.358794827043824,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0,0.551873492609465,3.37156238974363,4.45404409050372,0,17.6729649043061,0.94652465824877,0.780877488593277,0.215423397732799,0,0,0,0,0,0.395287777946524,2.24924921495265,0.283880170416537,0.178065603667255,0.651547837414304,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,2.04263763452273,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.987294123612726,2.74018454203139,0.23467170806371,0.21183207086382,0.220528398054962,1.48397627647332,2.09903754704677,0.904693873922338,0.477489376012546,0.492422699235184,19.2377352175701,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.09181281873089,0.404593039154462,1.32245529160537,0.785267825952089,6.61036363788144,19.2615187056947,0,1.04661582230785,0.330916980914195,0.388902376688095,0.387479470433193,0.337912250981556,0.58678619322877,0.39061315453185,0.838874755405687,0,1.15212002503146,0,0.202725215290164,0,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0.0962118416403295,0.233753804363138,5.44152920676507,0.221985953374065,0,0.335769232728157,0.772758376128762,1.50145980360946,0,2.57242054894879,0,1.6942555278512,1.84130094602871,1.71868654031819,2.749650917499,2.05524755931193,0.755393897389701,2.70009000092722,2.70192721934532,0.906284817968409,0,0.103787347584177,0,0.512200817262403,0.729320151204882,0.209613162627982,0.551530525350042,5.11167473943715,3.91466608753899,5.13470735346904,5.05394423527595,3.8021894983536,4.14977951049368,4.02658482120494,4.9939618875798,6.03072424033939,7.1444053692461,5.33067899346335,6.17309505483856,5.35711671044299,2.79677948255355,4.4573002810104,3.54951612318675,4.76872379894642,5.0871245821315,4.98779716201252,4.73841804193388,5.3049112133104,3.6829759601298,5.43216455383447,2.24456908663095,5.69448086996036,5.02372860115374,4.09231043169689,6.19747364743864,3.08650577569826,3.74715866906919,4.21076895201735,5.37177635120746,9.37312827137333,6.83833399270498,6.26043156175138 | |||
|short_description=p1@Tmem117 | |||
}} |
Revision as of 11:39, 13 September 2013
Short description: | p1@Tmem117 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem117_5end |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | 51bp_to_ENSMUST00000080141, NM_178789, uc007xjm.1, uc007xjn.1_5end |
EntrezGene: | Tmem117 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 2.08e-07 | 7 |
intestinal epithelial cell | 7.78e-07 | 9 |
epithelial cell of alimentary canal | 7.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.49e-12 | 15 |
intestinal mucosa | 2.97e-10 | 13 |
wall of intestine | 2.97e-10 | 13 |
gastrointestinal system mucosa | 2.97e-10 | 13 |
intestine | 1.23e-08 | 31 |
simple columnar epithelium | 2.93e-08 | 11 |
epithelium of mucosa | 7.78e-07 | 9 |
gastrointestinal system epithelium | 7.78e-07 | 9 |
intestinal epithelium | 7.78e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.