FFCP PHASE1:Hg19::chr4:74608483..74608501,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3576|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=6025|TSSclassifier=N|UniProt=|association_with_transcript=-353bp_to_AJ227913_5end|coexpression_cluster_id=C107|description=CAGE_peak_9_at_IL8_5end|id=chr4:74608483..74608501,+|ontology_enrichment_celltype=CL:0000766!5.69e-32!76;CL:0002057!1.23e-30!42;CL:0000860!1.65e-29!45;CL:0002009!3.60e-26!65;CL:0002194!9.35e-26!63;CL:0000576!9.35e-26!63;CL:0000040!9.35e-26!63;CL:0000559!9.35e-26!63;CL:0000557!6.77e-23!71;CL:0000839!5.88e-22!70;CL:0000359!1.19e-19!32;CL:0000048!1.99e-19!430;CL:0000723!9.98e-19!436;CL:0000034!1.40e-18!444;CL:0000763!5.37e-18!112;CL:0000049!5.37e-18!112;CL:0000738!5.52e-17!140;CL:0000192!3.00e-13!42;CL:0000514!3.00e-13!42;CL:0002087!3.19e-13!119;CL:0000094!5.44e-13!8;CL:0002031!2.02e-11!124;CL:0000037!5.31e-11!172;CL:0000566!5.31e-11!172;CL:0002032!9.85e-11!165;CL:0000837!9.85e-11!165;CL:0000680!1.18e-10!57;CL:0000056!1.18e-10!57;CL:0000355!1.18e-10!57;CL:0000988!3.83e-10!182;CL:0000187!1.17e-09!54;CL:0000134!2.73e-09!358;CL:0000183!4.48e-09!59;CL:0000081!6.72e-09!11;CL:0002539!7.22e-09!10;CL:0002320!1.04e-08!365;CL:0002595!1.40e-08!5;CL:0000012!2.33e-08!682;CL:0002371!3.02e-08!591;CL:0000393!4.84e-08!60;CL:0000211!4.84e-08!60;CL:0000548!5.62e-08!679;CL:0000004!5.62e-08!679;CL:0000255!5.62e-08!679;CL:0000144!6.41e-08!625|ontology_enrichment_celltype_v019=CL:0000860;1.87e-44;33!CL:0002057;1.87e-44;33!CL:0000473;5.85e-33;39!CL:0000234;5.85e-33;39!CL:0000576;1.32e-24;48!CL:0000766;4.66e-22;69!CL:0000359;1.69e-19;32!CL:0002595;4.75e-16;5!CL:0000094;3.34e-15;8!CL:0000192;2.70e-12;43!CL:0000775;1.99e-11;3!CL:0000081;7.57e-11;11!CL:0000763;4.01e-10;100!CL:0000771;3.14e-08;2!CL:0002539;1.42e-07;10!CL:0002593;1.48e-07;2!CL:0002087;3.53e-07;104!CL:0002589;4.24e-07;2!CL:0000187;6.65e-07;55|ontology_enrichment_celltype_v019_2=CL:0000860,2.53e-48,42;CL:0002057,2.53e-48,42;CL:0000473,7.39e-45,48;CL:0000234,7.39e-45,48;CL:0000766,1.08e-42,72;CL:0002194,2.16e-34,59;CL:0000576,2.16e-34,59;CL:0000040,2.16e-34,59;CL:0000559,2.16e-34,59;CL:0002009,4.82e-33,61;CL:0000839,5.02e-30,66;CL:0000557,1.78e-29,67;CL:0000763,1.16e-25,108;CL:0000049,1.16e-25,108;CL:0000359,4.89e-21,32;CL:0000738,5.78e-20,136;CL:0000034,6.79e-17,441;CL:0000048,6.79e-17,427;CL:0000723,1.76e-16,433;CL:0002595,3.99e-16,5;CL:0002087,1.51e-15,115;CL:0000094,2.68e-15,8;CL:0000192,1.14e-14,43;CL:0000514,1.14e-14,43;CL:0000037,1.54e-14,168;CL:0002032,1.84e-14,161;CL:0000837,1.84e-14,161;CL:0002031,1.92e-13,120;CL:0000988,2.27e-13,177;CL:0000775,1.99e-11,3;CL:0000081,6.48e-11,11;CL:0000187,1.17e-10,55;CL:0000680,6.38e-10,58;CL:0000056,6.38e-10,58;CL:0000355,6.38e-10,58;CL:0000393,2.94e-09,61;CL:0000211,2.94e-09,61;CL:0000771,3.09e-08,2;CL:0000134,1.36e-07,354;CL:0002539,1.40e-07,10;CL:0002593,1.51e-07,2;CL:0002320,2.97e-07,361;CL:0002589,5.13e-07,2|ontology_enrichment_development_v019=CL:0002057;9.22e-36;42!CL:0000514;2.70e-12;43|ontology_enrichment_disease=DOID:2394!3.28e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.33e-22!167;UBERON:0003081!2.95e-19!216;UBERON:0002371!6.21e-19!80;UBERON:0001474!8.98e-17!86;UBERON:0001637!6.31e-16!42;UBERON:0003509!6.31e-16!42;UBERON:0004572!6.31e-16!42;UBERON:0002193!2.59e-15!112;UBERON:0004573!4.31e-15!33;UBERON:0004571!4.31e-15!33;UBERON:0002390!4.81e-15!102;UBERON:0003061!4.81e-15!102;UBERON:0004765!3.75e-14!101;UBERON:0001434!3.75e-14!101;UBERON:0002405!7.41e-13!115;UBERON:0000055!3.34e-11!69;UBERON:0001981!7.93e-11!60;UBERON:0007500!7.93e-11!60;UBERON:0004537!7.93e-11!60;UBERON:0006965!7.93e-11!60;UBERON:0002049!3.30e-10!79;UBERON:0007798!3.30e-10!79;UBERON:0004535!3.50e-10!110;UBERON:0001009!1.24e-09!113;UBERON:0001134!1.76e-09!61;UBERON:0002036!1.76e-09!61;UBERON:0003082!1.76e-09!61;UBERON:0004872!2.36e-09!84;UBERON:0000926!4.90e-09!448;UBERON:0004120!4.90e-09!448;UBERON:0006603!4.90e-09!448;UBERON:0002385!5.90e-09!63;UBERON:0001015!5.90e-09!63;UBERON:0000383!5.90e-09!63;UBERON:0004237!7.22e-09!10;UBERON:0004695!7.22e-09!10;UBERON:0002111!7.22e-09!10;UBERON:0004178!7.22e-09!10;UBERON:0003834!1.40e-08!5;UBERON:0001533!1.40e-08!5;UBERON:0002384!2.57e-08!375;UBERON:0004290!3.38e-08!70;UBERON:0000486!8.23e-08!82;UBERON:0003513!7.16e-07!8|ontology_enrichment_uberon_v019=UBERON:0003834;4.75e-16;5!UBERON:0001533;4.75e-16;5!UBERON:0004573;7.02e-14;33!UBERON:0004571;7.02e-14;33!UBERON:0003513;2.23e-11;7!UBERON:0001637;1.69e-10;42!UBERON:0003509;1.69e-10;42!UBERON:0004572;1.69e-10;42!UBERON:0004237;1.42e-07;10!UBERON:0004695;1.42e-07;10!UBERON:0002111;1.42e-07;10!UBERON:0004178;1.42e-07;10!UBERON:0002119;1.44e-07;4!UBERON:0002456;1.48e-07;2!UBERON:0001529;4.24e-07;2!UBERON:0007204;4.24e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.40e-26,167;UBERON:0002371,3.57e-25,76;UBERON:0003081,2.02e-24,203;UBERON:0001474,7.91e-23,82;UBERON:0002405,1.11e-22,93;UBERON:0004765,3.46e-20,90;UBERON:0002193,5.89e-20,108;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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6025 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-353bp_to_AJ227913_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_9_at_IL8_5end | |||
|id=chr4:74608483..74608501,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.69e-32!76;CL:0002057!1.23e-30!42;CL:0000860!1.65e-29!45;CL:0002009!3.60e-26!65;CL:0002194!9.35e-26!63;CL:0000576!9.35e-26!63;CL:0000040!9.35e-26!63;CL:0000559!9.35e-26!63;CL:0000557!6.77e-23!71;CL:0000839!5.88e-22!70;CL:0000359!1.19e-19!32;CL:0000048!1.99e-19!430;CL:0000723!9.98e-19!436;CL:0000034!1.40e-18!444;CL:0000763!5.37e-18!112;CL:0000049!5.37e-18!112;CL:0000738!5.52e-17!140;CL:0000192!3.00e-13!42;CL:0000514!3.00e-13!42;CL:0002087!3.19e-13!119;CL:0000094!5.44e-13!8;CL:0002031!2.02e-11!124;CL:0000037!5.31e-11!172;CL:0000566!5.31e-11!172;CL:0002032!9.85e-11!165;CL:0000837!9.85e-11!165;CL:0000680!1.18e-10!57;CL:0000056!1.18e-10!57;CL:0000355!1.18e-10!57;CL:0000988!3.83e-10!182;CL:0000187!1.17e-09!54;CL:0000134!2.73e-09!358;CL:0000183!4.48e-09!59;CL:0000081!6.72e-09!11;CL:0002539!7.22e-09!10;CL:0002320!1.04e-08!365;CL:0002595!1.40e-08!5;CL:0000012!2.33e-08!682;CL:0002371!3.02e-08!591;CL:0000393!4.84e-08!60;CL:0000211!4.84e-08!60;CL:0000548!5.62e-08!679;CL:0000004!5.62e-08!679;CL:0000255!5.62e-08!679;CL:0000144!6.41e-08!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-44;33!CL:0002057;1.87e-44;33!CL:0000473;5.85e-33;39!CL:0000234;5.85e-33;39!CL:0000576;1.32e-24;48!CL:0000766;4.66e-22;69!CL:0000359;1.69e-19;32!CL:0002595;4.75e-16;5!CL:0000094;3.34e-15;8!CL:0000192;2.70e-12;43!CL:0000775;1.99e-11;3!CL:0000081;7.57e-11;11!CL:0000763;4.01e-10;100!CL:0000771;3.14e-08;2!CL:0002539;1.42e-07;10!CL:0002593;1.48e-07;2!CL:0002087;3.53e-07;104!CL:0002589;4.24e-07;2!CL:0000187;6.65e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.53e-48,42;CL:0002057,2.53e-48,42;CL:0000473,7.39e-45,48;CL:0000234,7.39e-45,48;CL:0000766,1.08e-42,72;CL:0002194,2.16e-34,59;CL:0000576,2.16e-34,59;CL:0000040,2.16e-34,59;CL:0000559,2.16e-34,59;CL:0002009,4.82e-33,61;CL:0000839,5.02e-30,66;CL:0000557,1.78e-29,67;CL:0000763,1.16e-25,108;CL:0000049,1.16e-25,108;CL:0000359,4.89e-21,32;CL:0000738,5.78e-20,136;CL:0000034,6.79e-17,441;CL:0000048,6.79e-17,427;CL:0000723,1.76e-16,433;CL:0002595,3.99e-16,5;CL:0002087,1.51e-15,115;CL:0000094,2.68e-15,8;CL:0000192,1.14e-14,43;CL:0000514,1.14e-14,43;CL:0000037,1.54e-14,168;CL:0002032,1.84e-14,161;CL:0000837,1.84e-14,161;CL:0002031,1.92e-13,120;CL:0000988,2.27e-13,177;CL:0000775,1.99e-11,3;CL:0000081,6.48e-11,11;CL:0000187,1.17e-10,55;CL:0000680,6.38e-10,58;CL:0000056,6.38e-10,58;CL:0000355,6.38e-10,58;CL:0000393,2.94e-09,61;CL:0000211,2.94e-09,61;CL:0000771,3.09e-08,2;CL:0000134,1.36e-07,354;CL:0002539,1.40e-07,10;CL:0002593,1.51e-07,2;CL:0002320,2.97e-07,361;CL:0002589,5.13e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;9.22e-36;42!CL:0000514;2.70e-12;43 | |||
|ontology_enrichment_disease=DOID:2394!3.28e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003834;4.75e-16;5!UBERON:0001533;4.75e-16;5!UBERON:0004573;7.02e-14;33!UBERON:0004571;7.02e-14;33!UBERON:0003513;2.23e-11;7!UBERON:0001637;1.69e-10;42!UBERON:0003509;1.69e-10;42!UBERON:0004572;1.69e-10;42!UBERON:0004237;1.42e-07;10!UBERON:0004695;1.42e-07;10!UBERON:0002111;1.42e-07;10!UBERON:0004178;1.42e-07;10!UBERON:0002119;1.44e-07;4!UBERON:0002456;1.48e-07;2!UBERON:0001529;4.24e-07;2!UBERON:0007204;4.24e-07;2 | |||
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|short_description=p9@IL8 | |||
}} |
Revision as of 11:38, 13 September 2013
Short description: | p9@IL8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_IL8_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -353bp_to_AJ227913_5end |
EntrezGene: | IL8 |
HGNC: | 6025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.