FFCP PHASE1:Mm9::chr15:81977668..81977705,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20788|HGNC=|UniProt=Q3U1N2,Q8BPL7|association_with_transcript=0bp_to_ENSMUST00000023100,ENSMUST00000100393,NM_033218,uc007wyh.1,uc007wyi.1,uc011zwr.1_5end|description=CAGE_peak_1_at_Srebf2_5end|id=chr15:81977668..81977705,+|ontology_enrichment_celltype=CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23;CL:0002319!2.11e-09!43;CL:0000221!5.95e-09!44;CL:0000133!5.95e-09!44;CL:0000144!7.69e-08!121;CL:0000012!7.69e-08!121;CL:0000548!1.90e-07!115;CL:0000004!1.90e-07!115;CL:0000255!1.90e-07!115;CL:0002371!2.32e-07!118;CL:0000540!3.97e-07!33;CL:0000047!3.97e-07!33;CL:0000031!3.97e-07!33;CL:0000404!3.97e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-10,23;CL:0000337,1.22e-10,23;CL:0002319,2.11e-09,43;CL:0000221,5.95e-09,44;CL:0000133,5.95e-09,44;CL:0000540,3.97e-07,33;CL:0000047,3.97e-07,33;CL:0000031,3.97e-07,33;CL:0000404,3.97e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.37e-17!94;UBERON:0007811!3.13e-17!86;UBERON:0002020!9.33e-14!34;UBERON:0001017!5.51e-13!73;UBERON:0005743!5.51e-13!73;UBERON:0000073!5.69e-13!75;UBERON:0001016!5.69e-13!75;UBERON:0000064!4.18e-12!99;UBERON:0002791!7.87e-12!29;UBERON:0003528!7.87e-12!29;UBERON:0001893!7.87e-12!29;UBERON:0001049!7.53e-11!52;UBERON:0005068!7.53e-11!52;UBERON:0006241!7.53e-11!52;UBERON:0007135!7.53e-11!52;UBERON:0000955!3.00e-10!50;UBERON:0006238!3.00e-10!50;UBERON:0002616!9.11e-10!49;UBERON:0002370!2.15e-09!23;UBERON:0000974!2.15e-09!23;UBERON:0004807!2.15e-09!23;UBERON:0005058!2.15e-09!23;UBERON:0003351!2.15e-09!23;UBERON:0009113!2.15e-09!23;UBERON:0003295!2.15e-09!23;UBERON:0009722!2.15e-09!23;UBERON:0005562!2.15e-09!23;UBERON:0007690!2.15e-09!23;UBERON:0004121!3.39e-09!102;UBERON:0000924!3.39e-09!102;UBERON:0006601!3.39e-09!102;UBERON:0003056!6.27e-09!49;UBERON:0000033!7.72e-09!63;UBERON:0003408!1.66e-08!24;UBERON:0006562!2.56e-08!24;UBERON:0001557!2.56e-08!24;UBERON:0001042!2.56e-08!24;UBERON:0008814!2.56e-08!24;UBERON:0009145!2.56e-08!24;UBERON:0003080!2.66e-08!40;UBERON:0000956!3.36e-08!21;UBERON:0001869!3.36e-08!21;UBERON:0000203!3.36e-08!21;UBERON:0002780!5.31e-08!39;UBERON:0001890!5.31e-08!39;UBERON:0006240!5.31e-08!39;UBERON:0000063!6.69e-08!35;UBERON:0002346!1.67e-07!71;UBERON:0003075!1.67e-07!71;UBERON:0007284!1.67e-07!71;UBERON:0000072!3.22e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.33e-14,34;UBERON:0001017,5.51e-13,73;UBERON:0001016,5.69e-13,75;UBERON:0004121,3.43e-12,95;UBERON:0000924,3.43e-12,95;UBERON:0006601,3.43e-12,95;UBERON:0003528,7.87e-12,29;UBERON:0002791,7.87e-12,29;UBERON:0001893,7.87e-12,29;UBERON:0000073,1.37e-11,54;UBERON:0001049,7.53e-11,52;UBERON:0005068,7.53e-11,52;UBERON:0006241,7.53e-11,52;UBERON:0007135,7.53e-11,52;UBERON:0002346,8.25e-11,64;UBERON:0003075,8.25e-11,64;UBERON:0007284,8.25e-11,64;UBERON:0002370,2.15e-09,23;UBERON:0000974,2.15e-09,23;UBERON:0004807,2.15e-09,23;UBERON:0005058,2.15e-09,23;UBERON:0003351,2.15e-09,23;UBERON:0009113,2.15e-09,23;UBERON:0003295,2.15e-09,23;UBERON:0009722,2.15e-09,23;UBERON:0005562,2.15e-09,23;UBERON:0007690,2.15e-09,23;UBERON:0000955,3.04e-09,47;UBERON:0006238,3.04e-09,47;UBERON:0010371,3.49e-09,73;UBERON:0003056,6.27e-09,49;UBERON:0002616,8.94e-09,46;UBERON:0003408,1.66e-08,24;UBERON:0006562,2.56e-08,24;UBERON:0001557,2.56e-08,24;UBERON:0001042,2.56e-08,24;UBERON:0008814,2.56e-08,24;UBERON:0009145,2.56e-08,24;UBERON:0003080,2.66e-08,40;UBERON:0000956,3.36e-08,21;UBERON:0001869,3.36e-08,21;UBERON:0000203,3.36e-08,21;UBERON:0002780,5.31e-08,39;UBERON:0001890,5.31e-08,39;UBERON:0006240,5.31e-08,39;UBERON:0000072,3.22e-07,27;UBERON:0007811,7.13e-07,36;UBERON:0000153,8.42e-07,43|phase1_expression=46.9236122017046,91.780532209152,74.1648760204944,84.3875149546056,65.6173406229715,72.6917247378483,77.0921713965235,74.5041576257895,147.687369537098,171.803362320343,93.9986645558022,103.783578852933,84.5731605860156,86.1090963827124,45.9691471305615,53.8584211256937,75.5526828378398,110.411757875383,95.020302488777,84.453540707808,57.23413427167,68.41146537741,57.4639536105658,69.2767190695451,63.5463708556061,63.7397480167672,65.9065854123384,55.5915780329594,79.9998595911334,62.7555023102228,54.3239751105497,123.195950651168,139.004641994113,79.2408405077194,51.9932915552294,42.0573652756986,46.5506132278202,85.3804526703292,61.7254922173802,63.8698967648034,64.7054636834116,73.0858668905537,78.1671668380157,46.5818226509636,44.4030958741474,65.8932840260437,133.788919883515,98.5473706839618,82.6020047081614,72.716782253782,91.6911061646124,90.5641155499321,117.1122590283,123.311564141929,118.305017298147,81.2939817873592,46.9914841499561,43.8321278435826,115.320382689971,129.602789921648,97.6100361399516,138.248569084206,131.615629824449,141.28425561318,140.41902348451,149.200824138681,107.556439676107,146.002956022191,98.7125109176707,103.684560638738,91.4913581878512,101.120448478946,103.808214247258,97.5026761751034,107.442773011443,109.387035606592,85.8903871795232,101.128371763469,1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301370162,69.8784856373991,67.6089158395256,63.5563252798633,66.7759303272709,72.1300910194979,74.0753707464237,69.5692773388472,64.6086627745478,71.5683526740034,95.1778301943574,71.583072184295,62.7423477821031,52.9868679830696,48.7507036254129,34.7801753430632|short_description=p1@Srebf2}} | ||
|EntrezGene=20788 | |||
|HGNC= | |||
|UniProt=Q3U1N2,Q8BPL7 | |||
|association_with_transcript=0bp_to_ENSMUST00000023100,ENSMUST00000100393,NM_033218,uc007wyh.1,uc007wyi.1,uc011zwr.1_5end | |||
|description=CAGE_peak_1_at_Srebf2_5end | |||
|id=chr15:81977668..81977705,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23;CL:0002319!2.11e-09!43;CL:0000221!5.95e-09!44;CL:0000133!5.95e-09!44;CL:0000144!7.69e-08!121;CL:0000012!7.69e-08!121;CL:0000548!1.90e-07!115;CL:0000004!1.90e-07!115;CL:0000255!1.90e-07!115;CL:0002371!2.32e-07!118;CL:0000540!3.97e-07!33;CL:0000047!3.97e-07!33;CL:0000031!3.97e-07!33;CL:0000404!3.97e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-10,23;CL:0000337,1.22e-10,23;CL:0002319,2.11e-09,43;CL:0000221,5.95e-09,44;CL:0000133,5.95e-09,44;CL:0000540,3.97e-07,33;CL:0000047,3.97e-07,33;CL:0000031,3.97e-07,33;CL:0000404,3.97e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.37e-17!94;UBERON:0007811!3.13e-17!86;UBERON:0002020!9.33e-14!34;UBERON:0001017!5.51e-13!73;UBERON:0005743!5.51e-13!73;UBERON:0000073!5.69e-13!75;UBERON:0001016!5.69e-13!75;UBERON:0000064!4.18e-12!99;UBERON:0002791!7.87e-12!29;UBERON:0003528!7.87e-12!29;UBERON:0001893!7.87e-12!29;UBERON:0001049!7.53e-11!52;UBERON:0005068!7.53e-11!52;UBERON:0006241!7.53e-11!52;UBERON:0007135!7.53e-11!52;UBERON:0000955!3.00e-10!50;UBERON:0006238!3.00e-10!50;UBERON:0002616!9.11e-10!49;UBERON:0002370!2.15e-09!23;UBERON:0000974!2.15e-09!23;UBERON:0004807!2.15e-09!23;UBERON:0005058!2.15e-09!23;UBERON:0003351!2.15e-09!23;UBERON:0009113!2.15e-09!23;UBERON:0003295!2.15e-09!23;UBERON:0009722!2.15e-09!23;UBERON:0005562!2.15e-09!23;UBERON:0007690!2.15e-09!23;UBERON:0004121!3.39e-09!102;UBERON:0000924!3.39e-09!102;UBERON:0006601!3.39e-09!102;UBERON:0003056!6.27e-09!49;UBERON:0000033!7.72e-09!63;UBERON:0003408!1.66e-08!24;UBERON:0006562!2.56e-08!24;UBERON:0001557!2.56e-08!24;UBERON:0001042!2.56e-08!24;UBERON:0008814!2.56e-08!24;UBERON:0009145!2.56e-08!24;UBERON:0003080!2.66e-08!40;UBERON:0000956!3.36e-08!21;UBERON:0001869!3.36e-08!21;UBERON:0000203!3.36e-08!21;UBERON:0002780!5.31e-08!39;UBERON:0001890!5.31e-08!39;UBERON:0006240!5.31e-08!39;UBERON:0000063!6.69e-08!35;UBERON:0002346!1.67e-07!71;UBERON:0003075!1.67e-07!71;UBERON:0007284!1.67e-07!71;UBERON:0000072!3.22e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.33e-14,34;UBERON:0001017,5.51e-13,73;UBERON:0001016,5.69e-13,75;UBERON:0004121,3.43e-12,95;UBERON:0000924,3.43e-12,95;UBERON:0006601,3.43e-12,95;UBERON:0003528,7.87e-12,29;UBERON:0002791,7.87e-12,29;UBERON:0001893,7.87e-12,29;UBERON:0000073,1.37e-11,54;UBERON:0001049,7.53e-11,52;UBERON:0005068,7.53e-11,52;UBERON:0006241,7.53e-11,52;UBERON:0007135,7.53e-11,52;UBERON:0002346,8.25e-11,64;UBERON:0003075,8.25e-11,64;UBERON:0007284,8.25e-11,64;UBERON:0002370,2.15e-09,23;UBERON:0000974,2.15e-09,23;UBERON:0004807,2.15e-09,23;UBERON:0005058,2.15e-09,23;UBERON:0003351,2.15e-09,23;UBERON:0009113,2.15e-09,23;UBERON:0003295,2.15e-09,23;UBERON:0009722,2.15e-09,23;UBERON:0005562,2.15e-09,23;UBERON:0007690,2.15e-09,23;UBERON:0000955,3.04e-09,47;UBERON:0006238,3.04e-09,47;UBERON:0010371,3.49e-09,73;UBERON:0003056,6.27e-09,49;UBERON:0002616,8.94e-09,46;UBERON:0003408,1.66e-08,24;UBERON:0006562,2.56e-08,24;UBERON:0001557,2.56e-08,24;UBERON:0001042,2.56e-08,24;UBERON:0008814,2.56e-08,24;UBERON:0009145,2.56e-08,24;UBERON:0003080,2.66e-08,40;UBERON:0000956,3.36e-08,21;UBERON:0001869,3.36e-08,21;UBERON:0000203,3.36e-08,21;UBERON:0002780,5.31e-08,39;UBERON:0001890,5.31e-08,39;UBERON:0006240,5.31e-08,39;UBERON:0000072,3.22e-07,27;UBERON:0007811,7.13e-07,36;UBERON:0000153,8.42e-07,43 | |||
|phase1_expression=46.9236122017046,91.780532209152,74.1648760204944,84.3875149546056,65.6173406229715,72.6917247378483,77.0921713965235,74.5041576257895,147.687369537098,171.803362320343,93.9986645558022,103.783578852933,84.5731605860156,86.1090963827124,45.9691471305615,53.8584211256937,75.5526828378398,110.411757875383,95.020302488777,84.453540707808,57.23413427167,68.41146537741,57.4639536105658,69.2767190695451,63.5463708556061,63.7397480167672,65.9065854123384,55.5915780329594,79.9998595911334,62.7555023102228,54.3239751105497,123.195950651168,139.004641994113,79.2408405077194,51.9932915552294,42.0573652756986,46.5506132278202,85.3804526703292,61.7254922173802,63.8698967648034,64.7054636834116,73.0858668905537,78.1671668380157,46.5818226509636,44.4030958741474,65.8932840260437,133.788919883515,98.5473706839618,82.6020047081614,72.716782253782,91.6911061646124,90.5641155499321,117.1122590283,123.311564141929,118.305017298147,81.2939817873592,46.9914841499561,43.8321278435826,115.320382689971,129.602789921648,97.6100361399516,138.248569084206,131.615629824449,141.28425561318,140.41902348451,149.200824138681,107.556439676107,146.002956022191,98.7125109176707,103.684560638738,91.4913581878512,101.120448478946,103.808214247258,97.5026761751034,107.442773011443,109.387035606592,85.8903871795232,101.128371763469,115.512113008695,134.260240909337,126.161460527723,126.061035674736,106.647905618528,95.6696437053856,94.5821153738455,96.3435474498893,94.6771677314035,101.214899083138,61.7925737598782,92.4995895707055,37.6823835312181,23.2314446784974,35.358509352803,22.1278308571505,31.1892680374881,25.0895056774508,46.4871030636099,85.3855916116069,86.5087395327553,90.4549310746471,56.3373679106722,137.30933083332,229.324715735981,213.320010945999,62.5659108522409,69.1672432747019,60.1574089567592,39.5076223827948,75.350924141327,54.9235914539852,67.4857921120268,42.0162360070755,44.2781754731632,35.5705431704189,31.7489509266403,40.7159755908149,183.171471091171,46.2717942143717,78.7303391235388,45.6182516851694,28.4885558813908,34.4261429726008,98.7876334456047,70.2673912827713,58.2261844941405,73.8270889552829,51.161058164028,34.1944556666242,41.297823798746,95.1170560220624,123.525162761029,93.2355292677454,127.413226700939,102.797613846793,109.296511438329,90.5306247918088,52.1417542913619,40.6810793895004,91.2329157945566,74.0755332720388,81.1951564087271,86.4431912669858,119.021067801336,80.0242582707647,89.5360328831475,80.8397574997402,81.1456934687252,46.5666067330228,107.999564459354,90.7709184805532,83.7527351020397,81.7600081954854,55.6094498451196,67.2126681387781,57.2074339214083,57.5209031105445,25.2796747432765,34.7419674604865,29.8371674365372,83.6788121043428,59.8041452951795,52.7581840080774,67.7089943773701,50.9619360225776,47.6685378821999,53.9478751820946,59.5566951107155,46.4726062621335,49.2033951241307,24.9534545400225,20.9157528628308,22.3685980760758,25.906913604344,24.6939810519084,113.766862173193,80.5743114929797,70.379200775549,71.930554132484,63.3466104089645,69.903238229992,94.8464515330607,95.7996741960877,101.849144080951,93.0203311690414,64.5359523700536,54.0212571494756,52.7803938480566,57.8963333639749,56.1496570903066,53.0303451105991,62.2477583639119,62.3312185286169,73.9704813717019,62.2654393723022,84.5308017548103,56.0041151574614,58.7676036117906,57.8620514095128,53.0554546472519,60.8153809675961,61.8574987695017,50.2226457161728,27.5700943191048,81.7541018008861,66.6334993433758,60.7127703439105,77.2897062490196,67.0472504111719,58.5639459097266,61.8546695519243,35.3454794369577,31.8491239298175,20.1275489138296,30.5155577088173,26.5232022147376,32.5826752551774,30.3181628852032,22.6748455040783,78.7048590109736,59.8792861194732,69.9119748936291,52.4512315045331,55.621588844375,71.860184442539,79.9826633377006,64.5892374409314,55.1723004371668,52.0442020674621,45.2851542987263,60.3016998153916,69.7647326738218,61.3312008385609,88.9668575241706,70.7077388964322,60.9787698543605,45.5295631402809,96.9725563526263,64.9352743720806,78.0330339992975,33.3261623909772,62.1551192250026,60.9084441102756,68.7200638767629,71.4516705878131,63.9432194616471,65.956831673798,66.3889550746827,65.4653121721339,70.7565122524277,121.780778923865,59.8987159578894,46.1189913498191,42.0248355132226,43.5521124647494,46.460798418987,48.5561272309963,47.1624748865012,70.5382998287059,91.5435867930396,91.6156740872904,50.1350888746349,29.0826983582004,36.0062352168569,51.513991543538,65.3595373164992,55.6931933540209,64.3430854874659,61.5808941587081,66.3610047805531,54.4416068980244,46.1084607469911,45.3056796709259,40.808157109326,65.4599640596388,83.7777997787446,41.3072538184449,55.5731563098504,70.406430006012,63.6169841181868,76.235537109189,81.4119386101391,81.5780271732954,55.9643206329313,94.5669040253599,55.8747780208978,37.7687968372697,36.4833218918332,37.1085860299241,61.5124024744613,54.6779833963589,87.5388914468355,81.7316481570163,85.9603837063516,51.5522133728161,82.880030318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| |||
|short_description=p1@Srebf2 | |||
}} |
Revision as of 11:19, 13 September 2013
Short description: | p1@Srebf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Srebf2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000023100, ENSMUST00000100393, NM_033218, uc007wyh.1, uc007wyi.1, uc011zwr.1_5end |
EntrezGene: | Srebf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.22e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-10 | 23 |
neural cell | 2.11e-09 | 43 |
ectodermal cell | 5.95e-09 | 44 |
neurectodermal cell | 5.95e-09 | 44 |
neuron | 3.97e-07 | 33 |
neuronal stem cell | 3.97e-07 | 33 |
neuroblast | 3.97e-07 | 33 |
electrically signaling cell | 3.97e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.