FFCP PHASE1:Hg19::chr4:41750047..41750056,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8929|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9143|TSSclassifier=N|UniProt=|association_with_transcript=-323bp_to_ENST00000510424_5end|coexpression_cluster_id=C85|description=CAGE_peak_7_at_PHOX2B_5end|id=chr4:41750047..41750056,-|ontology_enrichment_celltype=CL:0002322!3.60e-14!5;CL:0000333!1.00e-13!41;CL:0000133!1.28e-09!59;CL:0000221!5.36e-08!71;CL:0000148!1.52e-07!10;CL:0000541!1.52e-07!10|ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:169!1.63e-44!6;DOID:171!6.35e-27!10;DOID:3095!1.87e-12!22;DOID:2994!1.87e-12!22|ontology_enrichment_disease_v019=DOID:5409;8.69e-18;4!DOID:169;2.19e-12;6!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9!DOID:171;5.73e-08;10|ontology_enrichment_disease_v019_2=DOID:5409,8.69e-18,4;DOID:169,2.19e-12,6;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9;DOID:171,5.73e-08,10|ontology_enrichment_uberon=UBERON:0000013!2.71e-53!5;UBERON:0002410!2.71e-53!5;UBERON:0000010!7.36e-30!8;UBERON:0001896!1.12e-22!3;UBERON:0005290!1.12e-22!3;UBERON:0010096!1.12e-22!3;UBERON:0002298!4.78e-19!8;UBERON:0004733!6.31e-13!12;UBERON:0002028!6.31e-13!12;UBERON:0007277!6.31e-13!12;UBERON:0004732!5.56e-12!13;UBERON:0003076!1.82e-10!15;UBERON:0003057!1.82e-10!15;UBERON:0002148!1.33e-09!2;UBERON:0009662!1.33e-09!2;UBERON:0000073!5.87e-08!94;UBERON:0001016!5.87e-08!94;UBERON:0000059!5.98e-07!11;UBERON:0000988!8.15e-07!3;UBERON:0006331!8.15e-07!3|ontology_enrichment_uberon_v019=UBERON:0001052;1.03e-17;4!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0004907;1.83e-14;5!UBERON:0000010;1.04e-08;8!UBERON:0000059;2.63e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.03e-17,4;UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0004907,1.83e-14,5;UBERON:0000010,1.04e-08,8;UBERON:0000059,2.63e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4289089868834,0.215649622793364,0.629063767423586,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4232783922335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@PHOX2B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9143 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-323bp_to_ENST00000510424_5end | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_7_at_PHOX2B_5end | |||
|id=chr4:41750047..41750056,- | |||
|ontology_enrichment_celltype=CL:0002322!3.60e-14!5;CL:0000333!1.00e-13!41;CL:0000133!1.28e-09!59;CL:0000221!5.36e-08!71;CL:0000148!1.52e-07!10;CL:0000541!1.52e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!1.63e-44!6;DOID:171!6.35e-27!10;DOID:3095!1.87e-12!22;DOID:2994!1.87e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.69e-18;4!DOID:169;2.19e-12;6!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9!DOID:171;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.69e-18,4;DOID:169,2.19e-12,6;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000013!2.71e-53!5;UBERON:0002410!2.71e-53!5;UBERON:0000010!7.36e-30!8;UBERON:0001896!1.12e-22!3;UBERON:0005290!1.12e-22!3;UBERON:0010096!1.12e-22!3;UBERON:0002298!4.78e-19!8;UBERON:0004733!6.31e-13!12;UBERON:0002028!6.31e-13!12;UBERON:0007277!6.31e-13!12;UBERON:0004732!5.56e-12!13;UBERON:0003076!1.82e-10!15;UBERON:0003057!1.82e-10!15;UBERON:0002148!1.33e-09!2;UBERON:0009662!1.33e-09!2;UBERON:0000073!5.87e-08!94;UBERON:0001016!5.87e-08!94;UBERON:0000059!5.98e-07!11;UBERON:0000988!8.15e-07!3;UBERON:0006331!8.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.03e-17;4!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0004907;1.83e-14;5!UBERON:0000010;1.04e-08;8!UBERON:0000059;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.03e-17,4;UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0004907,1.83e-14,5;UBERON:0000010,1.04e-08,8;UBERON:0000059,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4289089868834,0.215649622793364,0.629063767423586,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4232783922335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@PHOX2B | |||
}} |
Revision as of 10:56, 13 September 2013
Short description: | p7@PHOX2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PHOX2B_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -323bp_to_ENST00000510424_5end |
EntrezGene: | PHOX2B |
HGNC: | 9143 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
rectum | 1.03e-17 | 4 |
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
lower digestive tract | 1.83e-14 | 5 |
peripheral nervous system | 1.04e-08 | 8 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.69e-18 | 4 |
neuroendocrine tumor | 2.19e-12 | 6 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
lung carcinoma | 1.12e-08 | 9 |
neuroectodermal tumor | 5.73e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.