FFCP PHASE1:Hg19::chr4:40632757..40632779,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54502|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30358|TSSclassifier=S|UniProt=D6RCT1|association_with_transcript=23bp_to_ENST00000505220,ENST00000511902_5end|description=CAGE_peak_16_at_RBM47_5end|id=chr4:40632757..40632779,-|ontology_enrichment_celltype=CL:0002009!6.89e-10!65;CL:0000066!8.85e-10!254;CL:0002076!1.87e-09!43;CL:0000039!2.04e-09!7;CL:0000586!2.04e-09!7;CL:0000223!3.33e-09!59;CL:0002194!5.56e-09!63;CL:0000576!5.56e-09!63;CL:0000040!5.56e-09!63;CL:0000559!5.56e-09!63;CL:0002368!2.23e-08!13;CL:0000557!3.50e-08!71;CL:0000860!2.08e-07!45;CL:0000839!3.87e-07!70;CL:0000766!4.06e-07!76|ontology_enrichment_celltype_v019=CL:0000039;1.11e-24;7!CL:0000586;1.11e-24;7!CL:0002322;3.04e-16;5!CL:0002368;2.44e-08;13|ontology_enrichment_celltype_v019_2=CL:0000039,1.06e-24,7;CL:0000586,1.06e-24,7;CL:0002322,1.37e-16,5;CL:0002368,2.08e-08,13|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.90e-15!106;DOID:0050687!1.86e-10!143|ontology_enrichment_disease_v019=DOID:3095;4.70e-07;22!DOID:2994;4.70e-07;22|ontology_enrichment_disease_v019_2=DOID:3095,4.64e-07,22;DOID:2994,4.64e-07,22|ontology_enrichment_uberon=UBERON:0004119!1.55e-12!169;UBERON:0000925!1.55e-12!169;UBERON:0006595!1.55e-12!169;UBERON:0001007!1.41e-11!155;UBERON:0001555!1.41e-11!155;UBERON:0007026!1.41e-11!155;UBERON:0001004!2.38e-11!72;UBERON:0000464!6.80e-10!104;UBERON:0000466!9.43e-10!126;UBERON:0000077!1.07e-09!130;UBERON:0004921!1.29e-09!129;UBERON:0004185!1.29e-09!129;UBERON:0000065!2.76e-09!53;UBERON:0001041!3.84e-09!98;UBERON:0000062!5.65e-09!511;UBERON:0000922!7.08e-08!612;UBERON:0005178!9.65e-08!34;UBERON:0002224!9.65e-08!34;UBERON:0003135!2.04e-07!11;UBERON:0005181!2.41e-07!35;UBERON:0005177!5.50e-07!107;UBERON:0002390!5.66e-07!102;UBERON:0003061!5.66e-07!102|ontology_enrichment_uberon_v019=UBERON:0003135;1.04e-10;11!UBERON:0000058;9.79e-08;10!UBERON:0001829;1.60e-07;2!UBERON:0000473;2.26e-07;8!UBERON:0000341;3.49e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003135,6.94e-11,11;UBERON:0001829,8.88e-08,2;UBERON:0000341,2.31e-07,2;UBERON:0000473,2.38e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0,0.895661896959697,0.32389366601898,0.77272670290256,0,0.377875943688809,0.242584061187816,0,0.822335776043652,0.309706370895104,0.28769239232215,0.512321413058201,0.945928919554341,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0.659702600373432,0.598390972864896,0.426224750532694,0.290209238628584,0.56738522469114,0,0.75374599577023,1.0429658368404,1.08594422352558,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.327447688744282,0.364295288292542,0.741568885568859,0.324547393654683,0.870648686496336,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0.573609190778008,3.41526377162867,1.32529768321485,2.20768491452085,1.55491582523056,1.7662459561294,1.45990943630332,0,0,0,0,0,0,0,0,0.330881918197182,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0.201057944823262,1.20364978706088,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.702012795417713,0.297262324577456,0,0.16798212819886,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.828728900423067,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15699440752685,0.576570202095319,2.80747967488085,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,2.17781969722645,1.22386941009813,0,0,0,0.229723400206959,0.507447609232169,0,0.569647187174163,0.476463550915578,1.23408681925858,0.648473311192717,0.540031437238115,0,1.06824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,1.0077309914171,0,0.123084805461069,0,0.359473404589307,2.14825409610731,0,0,0,0,0,0,0,0.7812832832557,1.66173999992772,0,1.2517279311405,1.27126825146383,0.709163045303809,0,0,0,0,0,0,0.110579259931225,0,0,0.32681539055697,0.697118721393016,0.307801034015188,0,5.99466151408956,5.56497395340587,3.9113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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54502 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |||
|TSSclassifier=S | |||
|UniProt=D6RCT1 | |||
|association_with_transcript=23bp_to_ENST00000505220,ENST00000511902_5end | |||
|description=CAGE_peak_16_at_RBM47_5end | |||
|id=chr4:40632757..40632779,- | |||
|ontology_enrichment_celltype=CL:0002009!6.89e-10!65;CL:0000066!8.85e-10!254;CL:0002076!1.87e-09!43;CL:0000039!2.04e-09!7;CL:0000586!2.04e-09!7;CL:0000223!3.33e-09!59;CL:0002194!5.56e-09!63;CL:0000576!5.56e-09!63;CL:0000040!5.56e-09!63;CL:0000559!5.56e-09!63;CL:0002368!2.23e-08!13;CL:0000557!3.50e-08!71;CL:0000860!2.08e-07!45;CL:0000839!3.87e-07!70;CL:0000766!4.06e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.11e-24;7!CL:0000586;1.11e-24;7!CL:0002322;3.04e-16;5!CL:0002368;2.44e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.06e-24,7;CL:0000586,1.06e-24,7;CL:0002322,1.37e-16,5;CL:0002368,2.08e-08,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.90e-15!106;DOID:0050687!1.86e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.70e-07;22!DOID:2994;4.70e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.64e-07,22;DOID:2994,4.64e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.55e-12!169;UBERON:0000925!1.55e-12!169;UBERON:0006595!1.55e-12!169;UBERON:0001007!1.41e-11!155;UBERON:0001555!1.41e-11!155;UBERON:0007026!1.41e-11!155;UBERON:0001004!2.38e-11!72;UBERON:0000464!6.80e-10!104;UBERON:0000466!9.43e-10!126;UBERON:0000077!1.07e-09!130;UBERON:0004921!1.29e-09!129;UBERON:0004185!1.29e-09!129;UBERON:0000065!2.76e-09!53;UBERON:0001041!3.84e-09!98;UBERON:0000062!5.65e-09!511;UBERON:0000922!7.08e-08!612;UBERON:0005178!9.65e-08!34;UBERON:0002224!9.65e-08!34;UBERON:0003135!2.04e-07!11;UBERON:0005181!2.41e-07!35;UBERON:0005177!5.50e-07!107;UBERON:0002390!5.66e-07!102;UBERON:0003061!5.66e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.04e-10;11!UBERON:0000058;9.79e-08;10!UBERON:0001829;1.60e-07;2!UBERON:0000473;2.26e-07;8!UBERON:0000341;3.49e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,6.94e-11,11;UBERON:0001829,8.88e-08,2;UBERON:0000341,2.31e-07,2;UBERON:0000473,2.38e-07,8 | |||
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| |||
|short_description=p16@RBM47 | |||
}} |
Revision as of 10:54, 13 September 2013
Short description: | p16@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_RBM47_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000505220, ENST00000511902_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | D6RCT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.06e-24 | 7 |
germ cell | 1.06e-24 | 7 |
embryonic stem cell | 1.37e-16 | 5 |
respiratory epithelial cell | 2.08e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 6.94e-11 | 11 |
major salivary gland | 8.88e-08 | 2 |
throat | 2.31e-07 | 2 |
testis | 2.38e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.64e-07 | 22 |
germ cell cancer | 4.64e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.