FFCP PHASE1:Mm9::chr15:74760930..74760948,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:74760930..74760948,-|id=chr15:74760930..74760948,-|ontology_enrichment_celltype=CL:0000553!7.30e-09!6;CL:0000556!7.30e-09!6;CL:0000414!3.79e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,1.37e-19,6;CL:0000556,1.37e-19,6;CL:0000839,6.92e-16,13;CL:0000945,1.16e-13,1;CL:0000236,1.16e-13,1;CL:0000826,1.16e-13,1;CL:0000050,2.54e-13,9;CL:0000763,5.22e-13,16;CL:0002031,8.12e-13,25;CL:0000049,4.93e-11,19;CL:0000988,4.41e-10,32;CL:0002032,4.41e-10,32;CL:0000037,4.41e-10,32;CL:0000837,4.41e-10,32;CL:0002476,2.03e-07,2;CL:0002320,4.36e-07,46;CL:0000134,4.36e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.21e-10!48;UBERON:0002390!5.47e-10!45;UBERON:0003061!5.47e-10!45;UBERON:0002106!7.63e-08!6;UBERON:0004457!7.63e-08!6;UBERON:0000042!7.63e-08!6;UBERON:0004854!7.63e-08!6;UBERON:0009034!7.63e-08!6;UBERON:0002095!7.63e-08!6;UBERON:0004782!7.63e-08!6;UBERON:0003281!7.63e-08!6;UBERON:0009664!7.63e-08!6;UBERON:0002296!7.63e-08!6;UBERON:0005602!7.63e-08!6;UBERON:0001179!7.63e-08!6;UBERON:0006293!7.63e-08!6;UBERON:0002405!1.92e-07!70;UBERON:0003081!3.18e-07!88;UBERON:0000945!7.44e-07!16;UBERON:0010039!7.44e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.62e-14,1;UBERON:0001097,3.62e-14,1;UBERON:0003968,3.62e-14,1;UBERON:0001467,3.62e-14,1;UBERON:0002371,5.22e-13,16;UBERON:0002193,1.33e-09,48;UBERON:0002405,1.33e-09,48;UBERON:0001474,1.36e-09,22;UBERON:0004765,1.36e-09,22;UBERON:0001434,1.36e-09,22;UBERON:0002390,3.26e-07,45;UBERON:0003061,3.26e-07,45;UBERON:0002384,4.36e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0,0.999329285446988,0.809901069559304,0.699561878128147,3.15462165358238,4.66189074259512,3.81950686618227,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,8.54495016035667,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0.884610551949874,0,0.883366073841574,0.969750506270444,0,0,0,0.766371165625774,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.660837565967596,0.528901133327089,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,1.50791283939272,0.54390568381871,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,1.19609616558497,0.206386867963223,0.740778109478847,0.565105371014073,0.956859594047176,0.915112692826091,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0,0.0826534557253359,0.523511883968059,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0.304827226619999,0.302478555410522,0.779663045918019,0,0.350630706544707,0,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p@chr15:74760930..74760948,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:74760930..74760948,- | |||
|id=chr15:74760930..74760948,- | |||
|ontology_enrichment_celltype=CL:0000553!7.30e-09!6;CL:0000556!7.30e-09!6;CL:0000414!3.79e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.37e-19,6;CL:0000556,1.37e-19,6;CL:0000839,6.92e-16,13;CL:0000945,1.16e-13,1;CL:0000236,1.16e-13,1;CL:0000826,1.16e-13,1;CL:0000050,2.54e-13,9;CL:0000763,5.22e-13,16;CL:0002031,8.12e-13,25;CL:0000049,4.93e-11,19;CL:0000988,4.41e-10,32;CL:0002032,4.41e-10,32;CL:0000037,4.41e-10,32;CL:0000837,4.41e-10,32;CL:0002476,2.03e-07,2;CL:0002320,4.36e-07,46;CL:0000134,4.36e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.21e-10!48;UBERON:0002390!5.47e-10!45;UBERON:0003061!5.47e-10!45;UBERON:0002106!7.63e-08!6;UBERON:0004457!7.63e-08!6;UBERON:0000042!7.63e-08!6;UBERON:0004854!7.63e-08!6;UBERON:0009034!7.63e-08!6;UBERON:0002095!7.63e-08!6;UBERON:0004782!7.63e-08!6;UBERON:0003281!7.63e-08!6;UBERON:0009664!7.63e-08!6;UBERON:0002296!7.63e-08!6;UBERON:0005602!7.63e-08!6;UBERON:0001179!7.63e-08!6;UBERON:0006293!7.63e-08!6;UBERON:0002405!1.92e-07!70;UBERON:0003081!3.18e-07!88;UBERON:0000945!7.44e-07!16;UBERON:0010039!7.44e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.62e-14,1;UBERON:0001097,3.62e-14,1;UBERON:0003968,3.62e-14,1;UBERON:0001467,3.62e-14,1;UBERON:0002371,5.22e-13,16;UBERON:0002193,1.33e-09,48;UBERON:0002405,1.33e-09,48;UBERON:0001474,1.36e-09,22;UBERON:0004765,1.36e-09,22;UBERON:0001434,1.36e-09,22;UBERON:0002390,3.26e-07,45;UBERON:0003061,3.26e-07,45;UBERON:0002384,4.36e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0,0.999329285446988,0.809901069559304,0.699561878128147,3.15462165358238,4.66189074259512,3.81950686618227,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,8.54495016035667,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0.884610551949874,0,0.883366073841574,0.969750506270444,0,0,0,0.766371165625774,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.660837565967596,0.528901133327089,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,1.50791283939272,0.54390568381871,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,1.19609616558497,0.206386867963223,0.740778109478847,0.565105371014073,0.956859594047176,0.915112692826091,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0,0.0826534557253359,0.523511883968059,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0.304827226619999,0.302478555410522,0.779663045918019,0,0.350630706544707,0,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr15:74760930..74760948,- | |||
}} |
Revision as of 10:52, 13 September 2013
Short description: | p@chr15:74760930..74760948, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:74760930..74760948, - |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.37e-19 | 6 |
megakaryocyte | 1.37e-19 | 6 |
myeloid lineage restricted progenitor cell | 6.92e-16 | 13 |
lymphocyte of B lineage | 1.16e-13 | 1 |
B cell | 1.16e-13 | 1 |
pro-B cell | 1.16e-13 | 1 |
megakaryocyte-erythroid progenitor cell | 2.54e-13 | 9 |
myeloid cell | 5.22e-13 | 16 |
hematopoietic lineage restricted progenitor cell | 8.12e-13 | 25 |
common myeloid progenitor | 4.93e-11 | 19 |
hematopoietic cell | 4.41e-10 | 32 |
hematopoietic oligopotent progenitor cell | 4.41e-10 | 32 |
hematopoietic stem cell | 4.41e-10 | 32 |
hematopoietic multipotent progenitor cell | 4.41e-10 | 32 |
bone marrow macrophage | 2.03e-07 | 2 |
connective tissue cell | 4.36e-07 | 46 |
mesenchymal cell | 4.36e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.62e-14 | 1 |
axillary lymph node | 3.62e-14 | 1 |
peripheral lymph node | 3.62e-14 | 1 |
shoulder | 3.62e-14 | 1 |
bone marrow | 5.22e-13 | 16 |
hemolymphoid system | 1.33e-09 | 48 |
immune system | 1.33e-09 | 48 |
bone element | 1.36e-09 | 22 |
skeletal element | 1.36e-09 | 22 |
skeletal system | 1.36e-09 | 22 |
hematopoietic system | 3.26e-07 | 45 |
blood island | 3.26e-07 | 45 |
connective tissue | 4.36e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.