FFCP PHASE1:Mm9::chr15:6385674..6385683,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=246|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:6385674..6385683,+|id=chr15:6385674..6385683,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,1.13e-15,4;CL:0000766,1.13e-15,4;CL:0000234,1.13e-15,4;CL:0000576,1.13e-15,4;CL:0000235,1.13e-15,4;CL:0000864,1.13e-15,4;CL:0002009,1.13e-15,4;CL:0000040,1.13e-15,4;CL:0000559,1.13e-15,4;CL:0002092,7.39e-13,3;CL:0002540,7.39e-13,3;CL:0000473,5.25e-09,7;CL:0000557,5.25e-09,7;CL:0000878,9.73e-09,2;CL:0000129,9.73e-09,2;CL:0002476,1.38e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.74e-13,7;UBERON:0006858,4.74e-13,7;UBERON:0002371,2.72e-11,16;UBERON:0003064,5.29e-09,14;UBERON:0001474,5.74e-08,22;UBERON:0004765,5.74e-08,22;UBERON:0001434,5.74e-08,22;UBERON:0005172,3.27e-07,49;UBERON:0005173,3.27e-07,49;UBERON:0002417,3.27e-07,49;UBERON:0000916,3.27e-07,49|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.367093504323363,0.782391344348039,0.218025156380447,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.771778308107841,0.573066879877513,0,0,0,0,0.338844532069132,1.77858959222228,4.94944844504769,3.9554654502679,4.2628806896766,2.09720077362883,2.30530983192933,0.103689612308478,0.270011876663381,0.420649922702764,0.285650984403804,0.220868540951614,0,0,0,0,0.638436690425939,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0,0.511290967734173,0,0.70667914902068,0,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0.520455980298408,2.43572382649713,0.230615497256059,2.26083960828934,1.52865319276416,1.25666591329675,10.3821886448437,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.509196819251581,0.248813941220186,1.51633655060205,0,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0.215567992932842,0,0,0,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0.32833492815819,0.405344047729279,0.146199987425332,0.658650345873152,0,0,0.308713837137853,0,0,0.853153002140936,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.823494773620054,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.799739588268102,0,0.814605311381257,0.969762435838129,0.701358198903186,1.20149420536089,1.47610147979602,1.56998727841375,0.740382983530803,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,12.9391385874619,0.372140947668503,1.24815069245824,0.757736633841335,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0.390267295715598,0,0.44292937929755,0.478364305972461,0.491589944147214,0,0.723245292907558,1.50791283939272,2.71952841909355,0.983528546038072,1.37968373152366,0.321101179975584,0,0.491804836130026,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.712262414669021,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0,0.18006109403131,0.258717367565509,0,0,0.356737635204141,0,0.304464949114599,0.704015124191131,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0.582961673259701,0,0.170870880797853,0,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,0,0.86404272657441,0.627264888043406,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.259229946583586,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.58678619322877,0.39061315453185,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.179427713218951,0,0,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,0,0.758091635291392,0.25347929989024,0.377252682772152,0.468207537349412,0.256100609619477,0.229741875822453,1.90517476513229,0,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.548783918618318,0.789209134313529,0.543216455383447,0,0.118635018124174,0.29551344712669,0.818462086339379,0.154936841185966,0,0.499621155875892,0,0.644613162144895,0.57386499620653,0,0.231867835620421|short_description=p@chr15:6385674..6385683,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=246 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:6385674..6385683,+ | |||
|id=chr15:6385674..6385683,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.13e-15,4;CL:0000766,1.13e-15,4;CL:0000234,1.13e-15,4;CL:0000576,1.13e-15,4;CL:0000235,1.13e-15,4;CL:0000864,1.13e-15,4;CL:0002009,1.13e-15,4;CL:0000040,1.13e-15,4;CL:0000559,1.13e-15,4;CL:0002092,7.39e-13,3;CL:0002540,7.39e-13,3;CL:0000473,5.25e-09,7;CL:0000557,5.25e-09,7;CL:0000878,9.73e-09,2;CL:0000129,9.73e-09,2;CL:0002476,1.38e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.74e-13,7;UBERON:0006858,4.74e-13,7;UBERON:0002371,2.72e-11,16;UBERON:0003064,5.29e-09,14;UBERON:0001474,5.74e-08,22;UBERON:0004765,5.74e-08,22;UBERON:0001434,5.74e-08,22;UBERON:0005172,3.27e-07,49;UBERON:0005173,3.27e-07,49;UBERON:0002417,3.27e-07,49;UBERON:0000916,3.27e-07,49 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.367093504323363,0.782391344348039,0.218025156380447,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.771778308107841,0.573066879877513,0,0,0,0,0.338844532069132,1.77858959222228,4.94944844504769,3.9554654502679,4.2628806896766,2.09720077362883,2.30530983192933,0.103689612308478,0.270011876663381,0.420649922702764,0.285650984403804,0.220868540951614,0,0,0,0,0.638436690425939,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0,0.511290967734173,0,0.70667914902068,0,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0.520455980298408,2.43572382649713,0.230615497256059,2.26083960828934,1.52865319276416,1.25666591329675,10.3821886448437,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.509196819251581,0.248813941220186,1.51633655060205,0,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0.215567992932842,0,0,0,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0.32833492815819,0.405344047729279,0.146199987425332,0.658650345873152,0,0,0.308713837137853,0,0,0.853153002140936,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.823494773620054,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.799739588268102,0,0.814605311381257,0.969762435838129,0.701358198903186,1.20149420536089,1.47610147979602,1.56998727841375,0.740382983530803,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,12.9391385874619,0.372140947668503,1.24815069245824,0.757736633841335,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0.390267295715598,0,0.44292937929755,0.478364305972461,0.491589944147214,0,0.723245292907558,1.50791283939272,2.71952841909355,0.983528546038072,1.37968373152366,0.321101179975584,0,0.491804836130026,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.712262414669021,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0,0.18006109403131,0.258717367565509,0,0,0.356737635204141,0,0.304464949114599,0.704015124191131,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0.582961673259701,0,0.170870880797853,0,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,0,0.86404272657441,0.627264888043406,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.259229946583586,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.58678619322877,0.39061315453185,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.179427713218951,0,0,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,0,0.758091635291392,0.25347929989024,0.377252682772152,0.468207537349412,0.256100609619477,0.229741875822453,1.90517476513229,0,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.548783918618318,0.789209134313529,0.543216455383447,0,0.118635018124174,0.29551344712669,0.818462086339379,0.154936841185966,0,0.499621155875892,0,0.644613162144895,0.57386499620653,0,0.231867835620421 | |||
|short_description=p@chr15:6385674..6385683,+ | |||
}} |
Revision as of 10:42, 13 September 2013
Short description: | p@chr15:6385674..6385683, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:6385674..6385683, + |
Coexpression cluster: | MCL_coexpression_mm9:246 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.13e-15 | 4 |
myeloid leukocyte | 1.13e-15 | 4 |
phagocyte | 1.13e-15 | 4 |
monocyte | 1.13e-15 | 4 |
macrophage | 1.13e-15 | 4 |
tissue-resident macrophage | 1.13e-15 | 4 |
macrophage dendritic cell progenitor | 1.13e-15 | 4 |
monoblast | 1.13e-15 | 4 |
promonocyte | 1.13e-15 | 4 |
bone marrow cell | 7.39e-13 | 3 |
mesenchymal stem cell of the bone marrow | 7.39e-13 | 3 |
defensive cell | 5.25e-09 | 7 |
granulocyte monocyte progenitor cell | 5.25e-09 | 7 |
central nervous system macrophage | 9.73e-09 | 2 |
microglial cell | 9.73e-09 | 2 |
bone marrow macrophage | 1.38e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 4.74e-13 | 7 |
adrenal/interrenal gland | 4.74e-13 | 7 |
bone marrow | 2.72e-11 | 16 |
intermediate mesoderm | 5.29e-09 | 14 |
bone element | 5.74e-08 | 22 |
skeletal element | 5.74e-08 | 22 |
skeletal system | 5.74e-08 | 22 |
abdomen element | 3.27e-07 | 49 |
abdominal segment element | 3.27e-07 | 49 |
abdominal segment of trunk | 3.27e-07 | 49 |
abdomen | 3.27e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.