FFCP PHASE1:Mm9::chr15:59356178..59356217,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=190|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:59356178..59356217,-|id=chr15:59356178..59356217,-|ontology_enrichment_celltype=CL:0000791!3.95e-32!9;CL:0000789!3.95e-32!9;CL:0002420!3.95e-32!9;CL:0002419!3.95e-32!9;CL:0000790!3.95e-32!9;CL:0000624!6.76e-29!8;CL:0000084!5.09e-26!11;CL:0000827!5.09e-26!11;CL:0000838!1.00e-23!12;CL:0000893!8.52e-22!6;CL:0002489!8.52e-22!6;CL:0000898!8.52e-22!6;CL:0000809!8.52e-22!6;CL:0000810!8.52e-22!6;CL:0000895!8.52e-22!6;CL:0000808!8.52e-22!6;CL:0000894!8.52e-22!6;CL:0000806!8.52e-22!6;CL:0000807!8.52e-22!6;CL:0000805!8.52e-22!6;CL:0002425!8.52e-22!6;CL:0002436!8.52e-22!6;CL:0002427!8.52e-22!6;CL:0002428!8.52e-22!6;CL:0002429!8.52e-22!6;CL:0002433!8.52e-22!6;CL:0002431!8.52e-22!6;CL:0002432!8.52e-22!6;CL:0000542!8.73e-22!13;CL:0000051!8.73e-22!13;CL:0000738!2.66e-16!17;CL:0002087!2.66e-16!17;CL:0002031!7.37e-16!25;CL:0000988!6.16e-12!32;CL:0002032!6.16e-12!32;CL:0000037!6.16e-12!32;CL:0000566!6.16e-12!32;CL:0000837!6.16e-12!32;CL:0002320!1.12e-07!46;CL:0000134!1.12e-07!46|ontology_enrichment_celltype_v019_2=CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000893,1.04e-26,6;CL:0002489,1.04e-26,6;CL:0000898,1.04e-26,6;CL:0000809,1.04e-26,6;CL:0000810,1.04e-26,6;CL:0000895,1.04e-26,6;CL:0000808,1.04e-26,6;CL:0000894,1.04e-26,6;CL:0000806,1.04e-26,6;CL:0000807,1.04e-26,6;CL:0000805,1.04e-26,6;CL:0002425,1.04e-26,6;CL:0002436,1.04e-26,6;CL:0002427,1.04e-26,6;CL:0002428,1.04e-26,6;CL:0002429,1.04e-26,6;CL:0002433,1.04e-26,6;CL:0002431,1.04e-26,6;CL:0002432,1.04e-26,6;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000815,5.15e-19,1;CL:0000792,5.15e-19,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.40e-36!23;UBERON:0000974!4.40e-36!23;UBERON:0004807!4.40e-36!23;UBERON:0005058!4.40e-36!23;UBERON:0003351!4.40e-36!23;UBERON:0009113!4.40e-36!23;UBERON:0003295!4.40e-36!23;UBERON:0009722!4.40e-36!23;UBERON:0005562!4.40e-36!23;UBERON:0007690!4.40e-36!23;UBERON:0006562!1.88e-34!24;UBERON:0003408!1.88e-34!24;UBERON:0001557!1.88e-34!24;UBERON:0001042!1.88e-34!24;UBERON:0008814!1.88e-34!24;UBERON:0009145!1.88e-34!24;UBERON:0000072!2.77e-30!27;UBERON:0004177!5.55e-28!29;UBERON:0000063!1.18e-22!35;UBERON:0002390!6.27e-22!45;UBERON:0003061!6.27e-22!45;UBERON:0002193!2.43e-20!48;UBERON:0000065!6.99e-19!41;UBERON:0001004!2.34e-18!42;UBERON:0005057!1.45e-14!51;UBERON:0003929!2.81e-13!55;UBERON:0002405!7.58e-13!70;UBERON:0002368!6.57e-12!60;UBERON:0002530!9.44e-11!65;UBERON:0000490!1.53e-10!66;UBERON:0005911!6.03e-10!69;UBERON:0003081!1.69e-09!88;UBERON:0000949!2.11e-09!72;UBERON:0007811!1.92e-08!86;UBERON:0000064!5.70e-08!99;UBERON:0002384!1.12e-07!46;UBERON:0000153!1.92e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.29e-10,46;UBERON:0002370,1.38e-07,23;UBERON:0000974,1.38e-07,23;UBERON:0004807,1.38e-07,23;UBERON:0005058,1.38e-07,23;UBERON:0003351,1.38e-07,23;UBERON:0009113,1.38e-07,23;UBERON:0003295,1.38e-07,23;UBERON:0009722,1.38e-07,23;UBERON:0005562,1.38e-07,23;UBERON:0007690,1.38e-07,23;UBERON:0006562,2.66e-07,24;UBERON:0003408,2.66e-07,24;UBERON:0001557,2.66e-07,24;UBERON:0001042,2.66e-07,24;UBERON:0008814,2.66e-07,24;UBERON:0009145,2.66e-07,24|phase1_expression=0,0,0,0,0,0,0,15.6239221364307,6.05391505252167,10.7669682108117,0.171217968225505,0.478632953972018,2.05440875917447,0.874204024189974,0,0.404950534779652,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0.164140899745061,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0.443068581523732,0.403865799792591,0.304827226619999,0.100826185136841,0.292373642219257,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:59356178..59356217,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=190 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:59356178..59356217,- | |||
|id=chr15:59356178..59356217,- | |||
|ontology_enrichment_celltype=CL:0000791!3.95e-32!9;CL:0000789!3.95e-32!9;CL:0002420!3.95e-32!9;CL:0002419!3.95e-32!9;CL:0000790!3.95e-32!9;CL:0000624!6.76e-29!8;CL:0000084!5.09e-26!11;CL:0000827!5.09e-26!11;CL:0000838!1.00e-23!12;CL:0000893!8.52e-22!6;CL:0002489!8.52e-22!6;CL:0000898!8.52e-22!6;CL:0000809!8.52e-22!6;CL:0000810!8.52e-22!6;CL:0000895!8.52e-22!6;CL:0000808!8.52e-22!6;CL:0000894!8.52e-22!6;CL:0000806!8.52e-22!6;CL:0000807!8.52e-22!6;CL:0000805!8.52e-22!6;CL:0002425!8.52e-22!6;CL:0002436!8.52e-22!6;CL:0002427!8.52e-22!6;CL:0002428!8.52e-22!6;CL:0002429!8.52e-22!6;CL:0002433!8.52e-22!6;CL:0002431!8.52e-22!6;CL:0002432!8.52e-22!6;CL:0000542!8.73e-22!13;CL:0000051!8.73e-22!13;CL:0000738!2.66e-16!17;CL:0002087!2.66e-16!17;CL:0002031!7.37e-16!25;CL:0000988!6.16e-12!32;CL:0002032!6.16e-12!32;CL:0000037!6.16e-12!32;CL:0000566!6.16e-12!32;CL:0000837!6.16e-12!32;CL:0002320!1.12e-07!46;CL:0000134!1.12e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000893,1.04e-26,6;CL:0002489,1.04e-26,6;CL:0000898,1.04e-26,6;CL:0000809,1.04e-26,6;CL:0000810,1.04e-26,6;CL:0000895,1.04e-26,6;CL:0000808,1.04e-26,6;CL:0000894,1.04e-26,6;CL:0000806,1.04e-26,6;CL:0000807,1.04e-26,6;CL:0000805,1.04e-26,6;CL:0002425,1.04e-26,6;CL:0002436,1.04e-26,6;CL:0002427,1.04e-26,6;CL:0002428,1.04e-26,6;CL:0002429,1.04e-26,6;CL:0002433,1.04e-26,6;CL:0002431,1.04e-26,6;CL:0002432,1.04e-26,6;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000815,5.15e-19,1;CL:0000792,5.15e-19,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.40e-36!23;UBERON:0000974!4.40e-36!23;UBERON:0004807!4.40e-36!23;UBERON:0005058!4.40e-36!23;UBERON:0003351!4.40e-36!23;UBERON:0009113!4.40e-36!23;UBERON:0003295!4.40e-36!23;UBERON:0009722!4.40e-36!23;UBERON:0005562!4.40e-36!23;UBERON:0007690!4.40e-36!23;UBERON:0006562!1.88e-34!24;UBERON:0003408!1.88e-34!24;UBERON:0001557!1.88e-34!24;UBERON:0001042!1.88e-34!24;UBERON:0008814!1.88e-34!24;UBERON:0009145!1.88e-34!24;UBERON:0000072!2.77e-30!27;UBERON:0004177!5.55e-28!29;UBERON:0000063!1.18e-22!35;UBERON:0002390!6.27e-22!45;UBERON:0003061!6.27e-22!45;UBERON:0002193!2.43e-20!48;UBERON:0000065!6.99e-19!41;UBERON:0001004!2.34e-18!42;UBERON:0005057!1.45e-14!51;UBERON:0003929!2.81e-13!55;UBERON:0002405!7.58e-13!70;UBERON:0002368!6.57e-12!60;UBERON:0002530!9.44e-11!65;UBERON:0000490!1.53e-10!66;UBERON:0005911!6.03e-10!69;UBERON:0003081!1.69e-09!88;UBERON:0000949!2.11e-09!72;UBERON:0007811!1.92e-08!86;UBERON:0000064!5.70e-08!99;UBERON:0002384!1.12e-07!46;UBERON:0000153!1.92e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.29e-10,46;UBERON:0002370,1.38e-07,23;UBERON:0000974,1.38e-07,23;UBERON:0004807,1.38e-07,23;UBERON:0005058,1.38e-07,23;UBERON:0003351,1.38e-07,23;UBERON:0009113,1.38e-07,23;UBERON:0003295,1.38e-07,23;UBERON:0009722,1.38e-07,23;UBERON:0005562,1.38e-07,23;UBERON:0007690,1.38e-07,23;UBERON:0006562,2.66e-07,24;UBERON:0003408,2.66e-07,24;UBERON:0001557,2.66e-07,24;UBERON:0001042,2.66e-07,24;UBERON:0008814,2.66e-07,24;UBERON:0009145,2.66e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,15.6239221364307,6.05391505252167,10.7669682108117,0.171217968225505,0.478632953972018,2.05440875917447,0.874204024189974,0,0.404950534779652,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0.164140899745061,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0.443068581523732,0.403865799792591,0.304827226619999,0.100826185136841,0.292373642219257,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:59356178..59356217,- | |||
}} |
Revision as of 10:38, 13 September 2013
Short description: | p@chr15:59356178..59356217, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:59356178..59356217, - |
Coexpression cluster: | MCL_coexpression_mm9:190 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.29e-10 | 46 |
thymus | 1.38e-07 | 23 |
neck | 1.38e-07 | 23 |
respiratory system epithelium | 1.38e-07 | 23 |
hemolymphoid system gland | 1.38e-07 | 23 |
pharyngeal epithelium | 1.38e-07 | 23 |
thymic region | 1.38e-07 | 23 |
pharyngeal gland | 1.38e-07 | 23 |
entire pharyngeal arch endoderm | 1.38e-07 | 23 |
thymus primordium | 1.38e-07 | 23 |
early pharyngeal endoderm | 1.38e-07 | 23 |
pharynx | 2.66e-07 | 24 |
gland of gut | 2.66e-07 | 24 |
upper respiratory tract | 2.66e-07 | 24 |
chordate pharynx | 2.66e-07 | 24 |
pharyngeal arch system | 2.66e-07 | 24 |
pharyngeal region of foregut | 2.66e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.