FFCP PHASE1:Hg19::chr4:185275080..185275098,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=728175|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=31bp_to_ENST00000317596,NR_040108,uc003iwd.1_5end|coexpression_cluster_id=C1070|description=CAGE_peak_4_at_LOC728175_5end|id=chr4:185275080..185275098,-|ontology_enrichment_celltype=CL:0000945!5.39e-33!24;CL:0000826!5.39e-33!24;CL:0000542!1.99e-21!53;CL:0000051!1.99e-21!53;CL:0000838!4.60e-18!52;CL:0000817!1.51e-14!3;CL:0000946!9.57e-12!1;CL:0000786!9.57e-12!1;CL:0000980!9.57e-12!1;CL:0002127!1.97e-11!1;CL:0000914!1.97e-11!1;CL:0000911!1.97e-11!1;CL:0000814!1.97e-11!1;CL:0002042!1.97e-11!1;CL:0002039!1.97e-11!1;CL:0002040!1.97e-11!1;CL:0002041!1.97e-11!1;CL:0000188!2.57e-10!9;CL:0002087!1.52e-08!119;CL:0000738!5.06e-07!140|ontology_enrichment_celltype_v019=CL:0000945;1.67e-47;24!CL:0000946;9.82e-20;1!CL:0000786;9.82e-20;1!CL:0002127;3.91e-19;1!CL:0000911;3.91e-19;1!CL:0000814;3.91e-19;1!CL:0000817;5.62e-19;1!CL:0000542;5.35e-12;53|ontology_enrichment_celltype_v019_2=CL:0000945,1.67e-47,24;CL:0000826,1.67e-47,24;CL:0000838,1.69e-27,52;CL:0000542,5.68e-27,53;CL:0000051,5.68e-27,53;CL:0000817,6.22e-25,3;CL:0000946,1.08e-19,1;CL:0000786,1.08e-19,1;CL:0000980,1.08e-19,1;CL:0002127,3.91e-19,1;CL:0000914,3.91e-19,1;CL:0000911,3.91e-19,1;CL:0000814,3.91e-19,1;CL:0002042,3.91e-19,1;CL:0002039,3.91e-19,1;CL:0002040,3.91e-19,1;CL:0002041,3.91e-19,1;CL:0002087,4.79e-12,115;CL:0002031,1.60e-11,120;CL:0000785,1.57e-10,2;CL:0000955,1.57e-10,2;CL:0000818,1.57e-10,2;CL:0000954,1.57e-10,2;CL:0000816,1.57e-10,2;CL:0000893,2.99e-10,2;CL:0002489,2.99e-10,2;CL:0000809,2.99e-10,2;CL:0000808,2.99e-10,2;CL:0000894,2.99e-10,2;CL:0000806,2.99e-10,2;CL:0000807,2.99e-10,2;CL:0000805,2.99e-10,2;CL:0002425,2.99e-10,2;CL:0000738,4.19e-10,136;CL:0002032,1.93e-08,161;CL:0000837,1.93e-08,161;CL:0000037,4.61e-08,168;CL:0000988,1.28e-07,177|ontology_enrichment_development_v019=CL:0000051;5.35e-12;53!CL:0000954;1.50e-10;2!CL:0002425;2.99e-10;2|ontology_enrichment_disease=DOID:2355!1.60e-11!1;DOID:630!1.78e-11!1;DOID:0050177!1.78e-11!1;DOID:0050427!1.78e-11!1;DOID:12603!3.28e-11!1;DOID:0060058!1.45e-09!10|ontology_enrichment_disease_v019=DOID:2355;2.71e-19;1!DOID:630;3.91e-19;1!DOID:0050177;3.91e-19;1!DOID:0050427;3.91e-19;1!DOID:74;2.49e-10;2!DOID:0060058;4.04e-08;10|ontology_enrichment_disease_v019_2=DOID:2355,2.71e-19,1;DOID:630,3.25e-19,1;DOID:0050177,3.25e-19,1;DOID:0050427,3.25e-19,1;DOID:74,2.49e-10,2;DOID:0060058,4.19e-08,10|ontology_enrichment_uberon=UBERON:0004177!2.55e-13!7;UBERON:0001154!2.68e-11!1;UBERON:0001153!2.68e-11!1;UBERON:0002370!8.53e-11!4;UBERON:0005058!8.53e-11!4;UBERON:0009113!8.53e-11!4;UBERON:0003295!8.53e-11!4;UBERON:0005562!8.53e-11!4;UBERON:0003351!1.74e-07!6|ontology_enrichment_uberon_v019=UBERON:0002106;2.97e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.85e-11,7;UBERON:0005057,3.85e-11,7;UBERON:0002106,3.16e-07,3;UBERON:0004854,3.16e-07,3;UBERON:0009034,3.16e-07,3;UBERON:0002095,3.16e-07,3;UBERON:0004782,3.16e-07,3;UBERON:0003281,3.16e-07,3;UBERON:0009664,3.16e-07,3;UBERON:0002296,3.16e-07,3;UBERON:0005602,3.16e-07,3;UBERON:0001179,3.16e-07,3;UBERON:0006293,3.16e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27915072188527,6.23964479819588,4.5652253161934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,1.00988449083511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,5.29264663482599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8102999429603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81056644507645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=728175 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=31bp_to_ENST00000317596,NR_040108,uc003iwd.1_5end | |||
|coexpression_cluster_id=C1070 | |||
|description=CAGE_peak_4_at_LOC728175_5end | |||
|id=chr4:185275080..185275098,- | |||
|ontology_enrichment_celltype=CL:0000945!5.39e-33!24;CL:0000826!5.39e-33!24;CL:0000542!1.99e-21!53;CL:0000051!1.99e-21!53;CL:0000838!4.60e-18!52;CL:0000817!1.51e-14!3;CL:0000946!9.57e-12!1;CL:0000786!9.57e-12!1;CL:0000980!9.57e-12!1;CL:0002127!1.97e-11!1;CL:0000914!1.97e-11!1;CL:0000911!1.97e-11!1;CL:0000814!1.97e-11!1;CL:0002042!1.97e-11!1;CL:0002039!1.97e-11!1;CL:0002040!1.97e-11!1;CL:0002041!1.97e-11!1;CL:0000188!2.57e-10!9;CL:0002087!1.52e-08!119;CL:0000738!5.06e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.67e-47;24!CL:0000946;9.82e-20;1!CL:0000786;9.82e-20;1!CL:0002127;3.91e-19;1!CL:0000911;3.91e-19;1!CL:0000814;3.91e-19;1!CL:0000817;5.62e-19;1!CL:0000542;5.35e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.67e-47,24;CL:0000826,1.67e-47,24;CL:0000838,1.69e-27,52;CL:0000542,5.68e-27,53;CL:0000051,5.68e-27,53;CL:0000817,6.22e-25,3;CL:0000946,1.08e-19,1;CL:0000786,1.08e-19,1;CL:0000980,1.08e-19,1;CL:0002127,3.91e-19,1;CL:0000914,3.91e-19,1;CL:0000911,3.91e-19,1;CL:0000814,3.91e-19,1;CL:0002042,3.91e-19,1;CL:0002039,3.91e-19,1;CL:0002040,3.91e-19,1;CL:0002041,3.91e-19,1;CL:0002087,4.79e-12,115;CL:0002031,1.60e-11,120;CL:0000785,1.57e-10,2;CL:0000955,1.57e-10,2;CL:0000818,1.57e-10,2;CL:0000954,1.57e-10,2;CL:0000816,1.57e-10,2;CL:0000893,2.99e-10,2;CL:0002489,2.99e-10,2;CL:0000809,2.99e-10,2;CL:0000808,2.99e-10,2;CL:0000894,2.99e-10,2;CL:0000806,2.99e-10,2;CL:0000807,2.99e-10,2;CL:0000805,2.99e-10,2;CL:0002425,2.99e-10,2;CL:0000738,4.19e-10,136;CL:0002032,1.93e-08,161;CL:0000837,1.93e-08,161;CL:0000037,4.61e-08,168;CL:0000988,1.28e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;5.35e-12;53!CL:0000954;1.50e-10;2!CL:0002425;2.99e-10;2 | |||
|ontology_enrichment_disease=DOID:2355!1.60e-11!1;DOID:630!1.78e-11!1;DOID:0050177!1.78e-11!1;DOID:0050427!1.78e-11!1;DOID:12603!3.28e-11!1;DOID:0060058!1.45e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;2.71e-19;1!DOID:630;3.91e-19;1!DOID:0050177;3.91e-19;1!DOID:0050427;3.91e-19;1!DOID:74;2.49e-10;2!DOID:0060058;4.04e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.71e-19,1;DOID:630,3.25e-19,1;DOID:0050177,3.25e-19,1;DOID:0050427,3.25e-19,1;DOID:74,2.49e-10,2;DOID:0060058,4.19e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.55e-13!7;UBERON:0001154!2.68e-11!1;UBERON:0001153!2.68e-11!1;UBERON:0002370!8.53e-11!4;UBERON:0005058!8.53e-11!4;UBERON:0009113!8.53e-11!4;UBERON:0003295!8.53e-11!4;UBERON:0005562!8.53e-11!4;UBERON:0003351!1.74e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.85e-11,7;UBERON:0005057,3.85e-11,7;UBERON:0002106,3.16e-07,3;UBERON:0004854,3.16e-07,3;UBERON:0009034,3.16e-07,3;UBERON:0002095,3.16e-07,3;UBERON:0004782,3.16e-07,3;UBERON:0003281,3.16e-07,3;UBERON:0009664,3.16e-07,3;UBERON:0002296,3.16e-07,3;UBERON:0005602,3.16e-07,3;UBERON:0001179,3.16e-07,3;UBERON:0006293,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27915072188527,6.23964479819588,4.5652253161934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,1.00988449083511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,5.29264663482599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8102999429603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81056644507645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22263532801208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09876427442351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56454793842586 | |||
|short_description=p4@LOC728175 | |||
}} |
Revision as of 10:13, 13 September 2013
Short description: | p4@LOC728175 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LOC728175_5end |
Coexpression cluster: | C1070_hereditary_B_non_plasma_b_splenic_NK |
Association with transcript: | 31bp_to_ENST00000317596, NR_040108, uc003iwd.1_5end |
EntrezGene: | LOC728175 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.85e-11 | 7 |
immune organ | 3.85e-11 | 7 |
spleen | 3.16e-07 | 3 |
gastrointestinal system mesentery | 3.16e-07 | 3 |
stomach region | 3.16e-07 | 3 |
mesentery | 3.16e-07 | 3 |
gastrointestinal system serosa | 3.16e-07 | 3 |
mesentery of stomach | 3.16e-07 | 3 |
gut mesentery | 3.16e-07 | 3 |
dorsal mesentery | 3.16e-07 | 3 |
dorsal mesogastrium | 3.16e-07 | 3 |
peritoneal cavity | 3.16e-07 | 3 |
spleen primordium | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.71e-19 | 1 |
genetic disease | 3.25e-19 | 1 |
monogenic disease | 3.25e-19 | 1 |
xeroderma pigmentosum | 3.25e-19 | 1 |
hematopoietic system disease | 2.49e-10 | 2 |
lymphoma | 4.19e-08 | 10 |
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