FFCP PHASE1:Hg19::chr4:156588397..156588406,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2982|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4685|TSSclassifier=S|UniProt=Q6PJR4|association_with_transcript=-83bp_to_ENST00000515201,uc003ipa.2_5end|description=CAGE_peak_14_at_GUCY1A3_5end|id=chr4:156588397..156588406,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000167;1.60e-09;1!CL:0000164;1.60e-09;1!CL:0000502;1.60e-09;1!CL:0000172;1.60e-09;1!CL:0000173;1.60e-09;1!CL:0000037;5.74e-09;1!CL:0001024;5.74e-09;1|ontology_enrichment_celltype_v019_2=CL:0000167,1.60e-09,1;CL:0000164,1.60e-09,1;CL:0000502,1.60e-09,1;CL:0000172,1.60e-09,1;CL:0000173,1.60e-09,1;CL:0002351,1.60e-09,1;CL:0001024,4.19e-09,1|ontology_enrichment_development_v019=CL:0002351;1.60e-09;1!UBERON:0008425;2.12e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;1.60e-09;1|ontology_enrichment_disease_v019_2=DOID:4430,1.60e-09,1|ontology_enrichment_uberon=UBERON:0007023!2.17e-44!115;UBERON:0001049!5.09e-38!57;UBERON:0005068!5.09e-38!57;UBERON:0006241!5.09e-38!57;UBERON:0007135!5.09e-38!57;UBERON:0003075!1.48e-34!86;UBERON:0007284!1.48e-34!86;UBERON:0002616!1.56e-32!59;UBERON:0002346!3.40e-32!90;UBERON:0003080!3.56e-30!42;UBERON:0002780!7.61e-29!41;UBERON:0001890!7.61e-29!41;UBERON:0006240!7.61e-29!41;UBERON:0005743!4.42e-28!86;UBERON:0000955!7.44e-28!69;UBERON:0006238!7.44e-28!69;UBERON:0000073!9.12e-28!94;UBERON:0001016!9.12e-28!94;UBERON:0003056!7.36e-27!61;UBERON:0001017!5.37e-26!82;UBERON:0002020!6.28e-24!34;UBERON:0003528!6.28e-24!34;UBERON:0001893!1.37e-23!34;UBERON:0002791!1.31e-22!33;UBERON:0001869!6.73e-22!32;UBERON:0004121!7.39e-21!169;UBERON:0000153!2.04e-20!129;UBERON:0007811!2.04e-20!129;UBERON:0000033!3.30e-20!123;UBERON:0000924!6.86e-20!173;UBERON:0006601!6.86e-20!173;UBERON:0002619!7.70e-17!22;UBERON:0001950!9.98e-17!20;UBERON:0000956!3.36e-14!25;UBERON:0000203!3.36e-14!25;UBERON:0002308!3.68e-12!9;UBERON:0000125!3.68e-12!9;UBERON:0000064!2.36e-11!219;UBERON:0002298!3.48e-10!8;UBERON:0009663!9.84e-10!7;UBERON:0000025!1.23e-09!194;UBERON:0002420!1.48e-09!9;UBERON:0007245!1.48e-09!9;UBERON:0010009!1.48e-09!9;UBERON:0010011!1.48e-09!9;UBERON:0000454!1.48e-09!9;UBERON:0003076!5.99e-09!15;UBERON:0003057!5.99e-09!15;UBERON:0004111!1.41e-08!241;UBERON:0000483!3.47e-08!309;UBERON:0000200!6.05e-08!6;UBERON:0000119!6.43e-08!312;UBERON:0004733!6.72e-08!12;UBERON:0002028!6.72e-08!12;UBERON:0007277!6.72e-08!12;UBERON:0000477!1.53e-07!286;UBERON:0000475!1.81e-07!365;UBERON:0000481!2.82e-07!347;UBERON:0000062!3.34e-07!511;UBERON:0001872!3.36e-07!5;UBERON:0004732!3.98e-07!13|ontology_enrichment_uberon_v019=UBERON:0005383;3.98e-11;3!UBERON:0005382;3.98e-11;3!UBERON:0009663;2.25e-10;7!UBERON:0001874;5.74e-09;1!UBERON:0003112;5.74e-09;1!UBERON:0002146;5.74e-09;1!UBERON:0011158;5.74e-09;1!UBERON:0005623;5.74e-09;1!UBERON:0003128;5.74e-09;1!UBERON:0001703;5.74e-09;1!UBERON:0002241;5.74e-09;1!UBERON:0000369;1.46e-08;4!UBERON:0002435;1.46e-08;4!UBERON:0000204;1.46e-08;4!UBERON:0002420;3.54e-08;9!UBERON:0000125;3.54e-08;9!UBERON:0007245;3.54e-08;9!UBERON:0002308;3.54e-08;9!UBERON:0010009;3.54e-08;9!UBERON:0010011;3.54e-08;9!UBERON:0000454;3.54e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0005383,2.26e-11,3;UBERON:0005382,2.26e-11,3;UBERON:0009663,1.69e-10,7;UBERON:0002146,3.31e-09,1;UBERON:0005623,3.31e-09,1;UBERON:0001874,4.91e-09,1;UBERON:0003112,8.49e-09,1;UBERON:0011158,8.49e-09,1;UBERON:0003128,8.49e-09,1;UBERON:0001703,8.49e-09,1;UBERON:0002241,8.49e-09,1;UBERON:0004761,8.49e-09,1;UBERON:0009617,8.49e-09,1;UBERON:0000369,9.56e-09,4;UBERON:0002435,9.56e-09,4;UBERON:0000204,9.56e-09,4;UBERON:0010082,9.56e-09,4;UBERON:0002420,2.83e-08,9;UBERON:0000125,2.83e-08,9;UBERON:0007245,2.83e-08,9;UBERON:0002308,2.83e-08,9;UBERON:0010009,2.83e-08,9;UBERON:0010011,2.83e-08,9;UBERON:0000454,2.83e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.57470412614962,0.236132343941038,0,0,0.154816123316076,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4685 | |||
|TSSclassifier=S | |||
|UniProt=Q6PJR4 | |||
|association_with_transcript=-83bp_to_ENST00000515201,uc003ipa.2_5end | |||
|description=CAGE_peak_14_at_GUCY1A3_5end | |||
|id=chr4:156588397..156588406,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.60e-09;1!CL:0000164;1.60e-09;1!CL:0000502;1.60e-09;1!CL:0000172;1.60e-09;1!CL:0000173;1.60e-09;1!CL:0000037;5.74e-09;1!CL:0001024;5.74e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.60e-09,1;CL:0000164,1.60e-09,1;CL:0000502,1.60e-09,1;CL:0000172,1.60e-09,1;CL:0000173,1.60e-09,1;CL:0002351,1.60e-09,1;CL:0001024,4.19e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.60e-09;1!UBERON:0008425;2.12e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.60e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.60e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.17e-44!115;UBERON:0001049!5.09e-38!57;UBERON:0005068!5.09e-38!57;UBERON:0006241!5.09e-38!57;UBERON:0007135!5.09e-38!57;UBERON:0003075!1.48e-34!86;UBERON:0007284!1.48e-34!86;UBERON:0002616!1.56e-32!59;UBERON:0002346!3.40e-32!90;UBERON:0003080!3.56e-30!42;UBERON:0002780!7.61e-29!41;UBERON:0001890!7.61e-29!41;UBERON:0006240!7.61e-29!41;UBERON:0005743!4.42e-28!86;UBERON:0000955!7.44e-28!69;UBERON:0006238!7.44e-28!69;UBERON:0000073!9.12e-28!94;UBERON:0001016!9.12e-28!94;UBERON:0003056!7.36e-27!61;UBERON:0001017!5.37e-26!82;UBERON:0002020!6.28e-24!34;UBERON:0003528!6.28e-24!34;UBERON:0001893!1.37e-23!34;UBERON:0002791!1.31e-22!33;UBERON:0001869!6.73e-22!32;UBERON:0004121!7.39e-21!169;UBERON:0000153!2.04e-20!129;UBERON:0007811!2.04e-20!129;UBERON:0000033!3.30e-20!123;UBERON:0000924!6.86e-20!173;UBERON:0006601!6.86e-20!173;UBERON:0002619!7.70e-17!22;UBERON:0001950!9.98e-17!20;UBERON:0000956!3.36e-14!25;UBERON:0000203!3.36e-14!25;UBERON:0002308!3.68e-12!9;UBERON:0000125!3.68e-12!9;UBERON:0000064!2.36e-11!219;UBERON:0002298!3.48e-10!8;UBERON:0009663!9.84e-10!7;UBERON:0000025!1.23e-09!194;UBERON:0002420!1.48e-09!9;UBERON:0007245!1.48e-09!9;UBERON:0010009!1.48e-09!9;UBERON:0010011!1.48e-09!9;UBERON:0000454!1.48e-09!9;UBERON:0003076!5.99e-09!15;UBERON:0003057!5.99e-09!15;UBERON:0004111!1.41e-08!241;UBERON:0000483!3.47e-08!309;UBERON:0000200!6.05e-08!6;UBERON:0000119!6.43e-08!312;UBERON:0004733!6.72e-08!12;UBERON:0002028!6.72e-08!12;UBERON:0007277!6.72e-08!12;UBERON:0000477!1.53e-07!286;UBERON:0000475!1.81e-07!365;UBERON:0000481!2.82e-07!347;UBERON:0000062!3.34e-07!511;UBERON:0001872!3.36e-07!5;UBERON:0004732!3.98e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;3.98e-11;3!UBERON:0005382;3.98e-11;3!UBERON:0009663;2.25e-10;7!UBERON:0001874;5.74e-09;1!UBERON:0003112;5.74e-09;1!UBERON:0002146;5.74e-09;1!UBERON:0011158;5.74e-09;1!UBERON:0005623;5.74e-09;1!UBERON:0003128;5.74e-09;1!UBERON:0001703;5.74e-09;1!UBERON:0002241;5.74e-09;1!UBERON:0000369;1.46e-08;4!UBERON:0002435;1.46e-08;4!UBERON:0000204;1.46e-08;4!UBERON:0002420;3.54e-08;9!UBERON:0000125;3.54e-08;9!UBERON:0007245;3.54e-08;9!UBERON:0002308;3.54e-08;9!UBERON:0010009;3.54e-08;9!UBERON:0010011;3.54e-08;9!UBERON:0000454;3.54e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,2.26e-11,3;UBERON:0005382,2.26e-11,3;UBERON:0009663,1.69e-10,7;UBERON:0002146,3.31e-09,1;UBERON:0005623,3.31e-09,1;UBERON:0001874,4.91e-09,1;UBERON:0003112,8.49e-09,1;UBERON:0011158,8.49e-09,1;UBERON:0003128,8.49e-09,1;UBERON:0001703,8.49e-09,1;UBERON:0002241,8.49e-09,1;UBERON:0004761,8.49e-09,1;UBERON:0009617,8.49e-09,1;UBERON:0000369,9.56e-09,4;UBERON:0002435,9.56e-09,4;UBERON:0000204,9.56e-09,4;UBERON:0010082,9.56e-09,4;UBERON:0002420,2.83e-08,9;UBERON:0000125,2.83e-08,9;UBERON:0007245,2.83e-08,9;UBERON:0002308,2.83e-08,9;UBERON:0010009,2.83e-08,9;UBERON:0010011,2.83e-08,9;UBERON:0000454,2.83e-08,9 | |||
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|short_description=p14@GUCY1A3 | |||
}} |
Revision as of 02:57, 13 September 2013
Short description: | p14@GUCY1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_GUCY1A3_5end |
Coexpression cluster: | NA |
Association with transcript: | -83bp_to_ENST00000515201, uc003ipa.2_5end |
EntrezGene: | GUCY1A3 |
HGNC: | 4685 |
UniProt: | Q6PJR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.60e-09 | 1 |
enteroendocrine cell | 1.60e-09 | 1 |
type D enteroendocrine cell | 1.60e-09 | 1 |
somatostatin secreting cell | 1.60e-09 | 1 |
pancreatic D cell | 1.60e-09 | 1 |
progenitor cell of endocrine pancreas | 1.60e-09 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.19e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 2.26e-11 | 3 |
dorsal striatum | 2.26e-11 | 3 |
telencephalic nucleus | 1.69e-10 | 7 |
pulmonary valve | 3.31e-09 | 1 |
semi-lunar valve | 3.31e-09 | 1 |
putamen | 4.91e-09 | 1 |
olfactory region | 8.49e-09 | 1 |
primary subdivision of skull | 8.49e-09 | 1 |
cranium | 8.49e-09 | 1 |
neurocranium | 8.49e-09 | 1 |
chondrocranium | 8.49e-09 | 1 |
cartilaginous neurocranium | 8.49e-09 | 1 |
head paraxial mesoderm | 8.49e-09 | 1 |
corpus striatum | 9.56e-09 | 4 |
striatum | 9.56e-09 | 4 |
ventral part of telencephalon | 9.56e-09 | 4 |
future corpus striatum | 9.56e-09 | 4 |
basal ganglion | 2.83e-08 | 9 |
neural nucleus | 2.83e-08 | 9 |
nuclear complex of neuraxis | 2.83e-08 | 9 |
nucleus of brain | 2.83e-08 | 9 |
aggregate regional part of brain | 2.83e-08 | 9 |
collection of basal ganglia | 2.83e-08 | 9 |
cerebral subcortex | 2.83e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.60e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.