FFCP PHASE1:Mm9::chr14:58691117..58691142,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14180|HGNC=|MCL_coexpression_id=39|UniProt=Q499I9,P54130|association_with_transcript=-380bp_to_ENSMUST00000022545,NM_013518,uc007udx.2_5end|description=CAGE_peak_2_at_Fgf9_5end|id=chr14:58691117..58691142,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-07,23;CL:0000337,2.69e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.55e-16!71;UBERON:0003075!1.55e-16!71;UBERON:0007284!1.55e-16!71;UBERON:0000033!8.16e-16!63;UBERON:0001049!1.69e-12!52;UBERON:0005068!1.69e-12!52;UBERON:0006241!1.69e-12!52;UBERON:0007135!1.69e-12!52;UBERON:0004121!6.95e-12!102;UBERON:0000924!6.95e-12!102;UBERON:0006601!6.95e-12!102;UBERON:0000955!1.76e-11!50;UBERON:0006238!1.76e-11!50;UBERON:0003056!2.08e-11!49;UBERON:0002616!7.36e-11!49;UBERON:0001017!3.57e-09!73;UBERON:0005743!3.57e-09!73;UBERON:0000073!2.32e-08!75;UBERON:0001016!2.32e-08!75;UBERON:0003080!4.00e-08!40;UBERON:0002021!7.28e-08!10;UBERON:0000411!7.28e-08!10;UBERON:0001950!7.28e-08!10;UBERON:0002780!1.39e-07!39;UBERON:0001890!1.39e-07!39;UBERON:0006240!1.39e-07!39;UBERON:0000153!2.62e-07!94;UBERON:0000489!2.80e-07!21;UBERON:0007811!3.51e-07!86;UBERON:0002020!3.92e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.50e-24,54;UBERON:0002346,3.63e-24,64;UBERON:0003075,3.63e-24,64;UBERON:0007284,3.63e-24,64;UBERON:0010314,3.93e-24,92;UBERON:0004121,9.16e-23,95;UBERON:0000924,9.16e-23,95;UBERON:0006601,9.16e-23,95;UBERON:0010371,2.65e-22,73;UBERON:0001049,4.88e-22,52;UBERON:0005068,4.88e-22,52;UBERON:0006241,4.88e-22,52;UBERON:0007135,4.88e-22,52;UBERON:0001017,1.80e-21,73;UBERON:0001016,1.38e-20,75;UBERON:0000955,8.03e-17,47;UBERON:0006238,8.03e-17,47;UBERON:0003056,9.33e-16,49;UBERON:0002616,1.16e-15,46;UBERON:0002021,1.83e-14,10;UBERON:0000411,1.83e-14,10;UBERON:0001950,1.83e-14,10;UBERON:0002020,4.09e-14,34;UBERON:0003080,2.77e-12,40;UBERON:0003076,7.56e-12,12;UBERON:0003057,7.56e-12,12;UBERON:0002780,2.85e-11,39;UBERON:0001890,2.85e-11,39;UBERON:0006240,2.85e-11,39;UBERON:0003528,2.53e-09,29;UBERON:0002791,2.53e-09,29;UBERON:0001893,2.53e-09,29;UBERON:0002619,4.06e-09,17;UBERON:0002240,6.32e-09,6;UBERON:0005174,6.32e-09,6;UBERON:0001137,6.32e-09,6;UBERON:0000956,3.80e-08,21;UBERON:0001869,3.80e-08,21;UBERON:0000203,3.80e-08,21;UBERON:0004111,1.78e-07,122;UBERON:0001948,1.80e-07,5;UBERON:0002315,1.80e-07,5;UBERON:0000489,4.05e-07,21;UBERON:0000025,8.87e-07,114|phase1_expression=1.12104192973356,0.348975407639361,0,0.60492842261366,0.500895729946347,0.503637815735669,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,3.42781181284564,3.53389665522582,0,0.0958454710182364,0,2.20231761998777,5.2351808614927,3.5329502648936,0.659431438650969,0.640413505216868,0,6.14202597803038,1.12552522006336,1.06958773443767,5.00868595305235,2.84743361598206,1.4911955666024,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,0,1.48442139064825,0.346970653532272,1.21786191324856,1.15307748628029,0.60289056221049,1.17588707135705,1.25666591329675,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0.484875253135222,0,14.0534782565543,12.9856958224342,0.255457055208591,0,0,0,4.94309110035915,1.83000241127451,0.502617408451458,1.91206752211504,4.60287823194595,3.53239675751252,3.40706652442291,0.305518091550949,0.124406970610093,0.505445516867349,1.47309299120532,0.780722657776222,0.689706313300419,0.540186389416048,1.20563854268572,2.38127747029647,1.2811372028485,1.59292931751539,3.10444044886819,0.431135985865684,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.540186184383045,0.473489471170421,1.57411385397923,0.771335564436891,0.465067889500816,1.60964040839772,0.817357396570186,0.987359099480883,0.820837320395476,0.810688095458557,0.584799949701329,0.219550115291051,1.07365135008297,3.99550902271842,0.514523061896422,0.991256348951394,0.528901133327089,1.49301775374664,0.232236671860439,1.15980715189884,0.605050573870028,0.444756087689741,0.570676878337677,0.474529061544512,0,0.502670417600539,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.758671603812327,0.685491075658373,2.25415471346161,0.610953983535943,0.969762435838129,1.75339549725796,1.70738650235495,2.21415221969403,1.09899109488962,2.22114895059241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.670025029767263,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,5.77982123956051,4.21962071731931,0,0,0,0,0,0,0,0,0,0,0,6.74774764485795,0.141940085208269,0.35613120733451,0.81443479676788,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,2.7235168460303,0.720244376125241,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,1.15184314421485,3.04464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,5.37733375830478,0,0,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.756037385752609,0.209088296014469,0.87345025498471,0.809186078308924,0.495920734352016,0,0.388844919875379,2.4853572523477,0,1.04661582230785,0.330916980914195,0.194451188344048,0,0.337912250981556,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0,0,3.3885110557024,4.60325236507177,4.58316410751517,5.32744865265431,3.42541259885321,3.0215755895588,4.72515750162264,3.60256962579376,4.53142408984205,3.10656187051092,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.222246727801615,0.412070114477788,0,1.01078884705519,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.631790158511746,0,0.463537303779422,0.192909220463705,0.824171801606613,1.03039244094078,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.658765662907314,0.846146078916765,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.711810108745045,0.394017929502254,0,0.154936841185966,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,0.765153328275374,1.32354851471709,0.231867835620421|short_description=p2@Fgf9}} | ||
|EntrezGene=14180 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=Q499I9,P54130 | |||
|association_with_transcript=-380bp_to_ENSMUST00000022545,NM_013518,uc007udx.2_5end | |||
|description=CAGE_peak_2_at_Fgf9_5end | |||
|id=chr14:58691117..58691142,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-07,23;CL:0000337,2.69e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.55e-16!71;UBERON:0003075!1.55e-16!71;UBERON:0007284!1.55e-16!71;UBERON:0000033!8.16e-16!63;UBERON:0001049!1.69e-12!52;UBERON:0005068!1.69e-12!52;UBERON:0006241!1.69e-12!52;UBERON:0007135!1.69e-12!52;UBERON:0004121!6.95e-12!102;UBERON:0000924!6.95e-12!102;UBERON:0006601!6.95e-12!102;UBERON:0000955!1.76e-11!50;UBERON:0006238!1.76e-11!50;UBERON:0003056!2.08e-11!49;UBERON:0002616!7.36e-11!49;UBERON:0001017!3.57e-09!73;UBERON:0005743!3.57e-09!73;UBERON:0000073!2.32e-08!75;UBERON:0001016!2.32e-08!75;UBERON:0003080!4.00e-08!40;UBERON:0002021!7.28e-08!10;UBERON:0000411!7.28e-08!10;UBERON:0001950!7.28e-08!10;UBERON:0002780!1.39e-07!39;UBERON:0001890!1.39e-07!39;UBERON:0006240!1.39e-07!39;UBERON:0000153!2.62e-07!94;UBERON:0000489!2.80e-07!21;UBERON:0007811!3.51e-07!86;UBERON:0002020!3.92e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.50e-24,54;UBERON:0002346,3.63e-24,64;UBERON:0003075,3.63e-24,64;UBERON:0007284,3.63e-24,64;UBERON:0010314,3.93e-24,92;UBERON:0004121,9.16e-23,95;UBERON:0000924,9.16e-23,95;UBERON:0006601,9.16e-23,95;UBERON:0010371,2.65e-22,73;UBERON:0001049,4.88e-22,52;UBERON:0005068,4.88e-22,52;UBERON:0006241,4.88e-22,52;UBERON:0007135,4.88e-22,52;UBERON:0001017,1.80e-21,73;UBERON:0001016,1.38e-20,75;UBERON:0000955,8.03e-17,47;UBERON:0006238,8.03e-17,47;UBERON:0003056,9.33e-16,49;UBERON:0002616,1.16e-15,46;UBERON:0002021,1.83e-14,10;UBERON:0000411,1.83e-14,10;UBERON:0001950,1.83e-14,10;UBERON:0002020,4.09e-14,34;UBERON:0003080,2.77e-12,40;UBERON:0003076,7.56e-12,12;UBERON:0003057,7.56e-12,12;UBERON:0002780,2.85e-11,39;UBERON:0001890,2.85e-11,39;UBERON:0006240,2.85e-11,39;UBERON:0003528,2.53e-09,29;UBERON:0002791,2.53e-09,29;UBERON:0001893,2.53e-09,29;UBERON:0002619,4.06e-09,17;UBERON:0002240,6.32e-09,6;UBERON:0005174,6.32e-09,6;UBERON:0001137,6.32e-09,6;UBERON:0000956,3.80e-08,21;UBERON:0001869,3.80e-08,21;UBERON:0000203,3.80e-08,21;UBERON:0004111,1.78e-07,122;UBERON:0001948,1.80e-07,5;UBERON:0002315,1.80e-07,5;UBERON:0000489,4.05e-07,21;UBERON:0000025,8.87e-07,114 | |||
|phase1_expression=1.12104192973356,0.348975407639361,0,0.60492842261366,0.500895729946347,0.503637815735669,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,3.42781181284564,3.53389665522582,0,0.0958454710182364,0,2.20231761998777,5.2351808614927,3.5329502648936,0.659431438650969,0.640413505216868,0,6.14202597803038,1.12552522006336,1.06958773443767,5.00868595305235,2.84743361598206,1.4911955666024,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,0,1.48442139064825,0.346970653532272,1.21786191324856,1.15307748628029,0.60289056221049,1.17588707135705,1.25666591329675,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0.484875253135222,0,14.0534782565543,12.9856958224342,0.255457055208591,0,0,0,4.94309110035915,1.83000241127451,0.502617408451458,1.91206752211504,4.60287823194595,3.53239675751252,3.40706652442291,0.305518091550949,0.124406970610093,0.505445516867349,1.47309299120532,0.780722657776222,0.689706313300419,0.540186389416048,1.20563854268572,2.38127747029647,1.2811372028485,1.59292931751539,3.10444044886819,0.431135985865684,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.540186184383045,0.473489471170421,1.57411385397923,0.771335564436891,0.465067889500816,1.60964040839772,0.817357396570186,0.987359099480883,0.820837320395476,0.810688095458557,0.584799949701329,0.219550115291051,1.07365135008297,3.99550902271842,0.514523061896422,0.991256348951394,0.528901133327089,1.49301775374664,0.232236671860439,1.15980715189884,0.605050573870028,0.444756087689741,0.570676878337677,0.474529061544512,0,0.502670417600539,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.758671603812327,0.685491075658373,2.25415471346161,0.610953983535943,0.969762435838129,1.75339549725796,1.70738650235495,2.21415221969403,1.09899109488962,2.22114895059241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.670025029767263,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,5.77982123956051,4.21962071731931,0,0,0,0,0,0,0,0,0,0,0,6.74774764485795,0.141940085208269,0.35613120733451,0.81443479676788,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,2.7235168460303,0.720244376125241,0.129358683782755,0.643011105094777,0.532020700926821,0.713475270408282,1.15184314421485,3.04464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,5.37733375830478,0,0,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.756037385752609,0.209088296014469,0.87345025498471,0.809186078308924,0.495920734352016,0,0.388844919875379,2.4853572523477,0,1.04661582230785,0.330916980914195,0.194451188344048,0,0.337912250981556,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0,0,3.3885110557024,4.60325236507177,4.58316410751517,5.32744865265431,3.42541259885321,3.0215755895588,4.72515750162264,3.60256962579376,4.53142408984205,3.10656187051092,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.222246727801615,0.412070114477788,0,1.01078884705519,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.631790158511746,0,0.463537303779422,0.192909220463705,0.824171801606613,1.03039244094078,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.658765662907314,0.846146078916765,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.711810108745045,0.394017929502254,0,0.154936841185966,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,0.765153328275374,1.32354851471709,0.231867835620421 | |||
|short_description=p2@Fgf9 | |||
}} |
Revision as of 02:37, 13 September 2013
Short description: | p2@Fgf9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fgf9_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -380bp_to_ENSMUST00000022545, NM_013518, uc007udx.2_5end |
EntrezGene: | Fgf9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.69e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.69e-07 | 23 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.