FFCP PHASE1:Hg19::chr4:119273889..119273914,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8492|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9477|TSSclassifier=S|UniProt=P56730,Q96I80|association_with_transcript=7bp_to_NM_003619,uc003ica.1_5end|description=CAGE_peak_2_at_PRSS12_5end|id=chr4:119273889..119273914,-|ontology_enrichment_celltype=CL:0000055!1.93e-28!180;CL:0000057!7.66e-18!75;CL:0000393!5.61e-16!60;CL:0000211!5.61e-16!60;CL:0000187!1.56e-13!54;CL:0000680!1.94e-13!57;CL:0000056!1.94e-13!57;CL:0000355!1.94e-13!57;CL:0000192!2.09e-13!42;CL:0000514!2.09e-13!42;CL:0000183!2.28e-13!59;CL:0002620!3.21e-10!23;CL:0000359!1.07e-09!32;CL:0002321!6.16e-07!248;CL:0000220!7.26e-07!246|ontology_enrichment_celltype_v019=CL:0002620;1.30e-12;23!CL:0000057;2.84e-11;73!CL:0000192;3.77e-09;43!CL:0002556;4.93e-07;6!CL:0000359;6.67e-07;32|ontology_enrichment_celltype_v019_2=CL:0000057,1.07e-26,76;CL:0000393,3.11e-13,61;CL:0000211,3.11e-13,61;CL:0002620,7.84e-13,23;CL:0000192,6.26e-12,43;CL:0000514,6.26e-12,43;CL:0000680,3.86e-11,58;CL:0000056,3.86e-11,58;CL:0000355,3.86e-11,58;CL:0000187,6.57e-11,55;CL:0000359,2.97e-07,32;CL:0002556,5.05e-07,6|ontology_enrichment_development_v019=CL:0000514;3.77e-09;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.88e-21!365;UBERON:0000914!2.34e-19!83;UBERON:0002329!2.34e-19!83;UBERON:0003077!2.34e-19!83;UBERON:0003059!2.34e-19!83;UBERON:0007282!2.34e-19!83;UBERON:0009618!2.34e-19!83;UBERON:0007285!2.34e-19!83;UBERON:0004290!3.93e-14!70;UBERON:0000486!5.72e-14!82;UBERON:0000468!3.68e-13!659;UBERON:0001134!9.14e-13!61;UBERON:0002036!9.14e-13!61;UBERON:0003082!9.14e-13!61;UBERON:0000481!2.13e-12!347;UBERON:0003102!2.28e-12!95;UBERON:0002385!3.34e-12!63;UBERON:0001015!3.34e-12!63;UBERON:0000383!3.34e-12!63;UBERON:0001444!2.95e-11!48;UBERON:0005256!6.33e-11!143;UBERON:0000467!3.03e-09!625;UBERON:0000480!4.33e-09!626;UBERON:0002100!4.58e-09!216;UBERON:0000033!3.32e-08!123;UBERON:0004573!4.24e-08!33;UBERON:0004571!4.24e-08!33;UBERON:0000153!4.72e-08!129;UBERON:0007811!4.72e-08!129;UBERON:0002049!7.86e-08!79;UBERON:0007798!7.86e-08!79;UBERON:0002097!1.09e-07!40;UBERON:0001637!1.20e-07!42;UBERON:0003509!1.20e-07!42;UBERON:0004572!1.20e-07!42;UBERON:0000922!1.68e-07!612;UBERON:0000119!4.13e-07!312;UBERON:0003104!4.57e-07!238;UBERON:0009142!4.57e-07!238;UBERON:0000075!6.15e-07!13;UBERON:0005944!6.15e-07!13;UBERON:0004288!6.15e-07!13;UBERON:0003089!6.15e-07!13;UBERON:0002199!7.70e-07!45;UBERON:0002416!7.70e-07!45;UBERON:0000483!8.35e-07!309|ontology_enrichment_uberon_v019=UBERON:0001444;6.02e-08;48!UBERON:0000970;1.26e-07;20!UBERON:0001456;2.20e-07;21!UBERON:0000033;2.30e-07;50!UBERON:0000019;3.92e-07;19!UBERON:0000047;3.92e-07;19!UBERON:0004088;3.92e-07;19!UBERON:0010230;3.92e-07;19!UBERON:0002104;4.78e-07;21!UBERON:0001758;4.93e-07;6!UBERON:0003672;4.93e-07;6!UBERON:0007811;6.53e-07;52!UBERON:0011137;7.17e-07;11!UBERON:0010323;7.17e-07;11!UBERON:0000020;8.13e-07;23|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.23e-12,99;UBERON:0007524,2.19e-12,73;UBERON:0002329,4.61e-12,71;UBERON:0003059,4.61e-12,71;UBERON:0007282,4.61e-12,71;UBERON:0004290,4.61e-12,71;UBERON:0009618,4.61e-12,71;UBERON:0003077,1.04e-11,72;UBERON:0007285,1.04e-11,72;UBERON:0001134,2.10e-10,62;UBERON:0002036,2.10e-10,62;UBERON:0003082,2.10e-10,62;UBERON:0001444,6.42e-10,49;UBERON:0007503,8.39e-10,78;UBERON:0002385,1.00e-09,64;UBERON:0001015,1.00e-09,64;UBERON:0000383,1.00e-09,64;UBERON:0000486,1.49e-09,83;UBERON:0002097,4.08e-09,41;UBERON:0000033,6.21e-09,56;UBERON:0002199,1.44e-08,46;UBERON:0002416,1.44e-08,46;UBERON:0000153,8.11e-08,62;UBERON:0007811,8.11e-08,62;UBERON:0000970,4.90e-07,21;UBERON:0002104,4.90e-07,21;UBERON:0001758,5.05e-07,6;UBERON:0003672,5.05e-07,6;UBERON:0010323,7.07e-07,11;UBERON:0001456,8.30e-07,22|phase1_expression=0.54503513781167,1.07050261945492,0,1.0007329835313,1.34088328328186,0,0,0,0,1.72013755551056,0.697801167972428,0,0,2.22779435328084,0.662794751455832,1.34465029290355,1.20538905604795,2.92124036154949,0.975865597581014,9.35720041383588,28.1520953917069,4.07491137921514,0.572471974262113,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.472674085820339,0.886917589850256,1.66886092816939,1.24430121722827,1.09288586487763,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0.35576626268671,0,5.23678112241891,7.60272105718513,1.22031028774085,0.735326160691737,1.62028389576352,0,0,0,0,0,0,0,0,1.3082821564276,12.9212707440783,26.0858854029034,11.3871895499368,39.8702902840851,12.0587249947441,3.36406560085384,0,0,0,0,0,2.8757911252537,1.72852777344,22.2605360242107,1.87296046098192,3.99330275081114,0.597794722207204,6.92863541998213,3.72307772046703,3.08991774744947,8.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8492 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9477 | |||
|TSSclassifier=S | |||
|UniProt=P56730,Q96I80 | |||
|association_with_transcript=7bp_to_NM_003619,uc003ica.1_5end | |||
|description=CAGE_peak_2_at_PRSS12_5end | |||
|id=chr4:119273889..119273914,- | |||
|ontology_enrichment_celltype=CL:0000055!1.93e-28!180;CL:0000057!7.66e-18!75;CL:0000393!5.61e-16!60;CL:0000211!5.61e-16!60;CL:0000187!1.56e-13!54;CL:0000680!1.94e-13!57;CL:0000056!1.94e-13!57;CL:0000355!1.94e-13!57;CL:0000192!2.09e-13!42;CL:0000514!2.09e-13!42;CL:0000183!2.28e-13!59;CL:0002620!3.21e-10!23;CL:0000359!1.07e-09!32;CL:0002321!6.16e-07!248;CL:0000220!7.26e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.30e-12;23!CL:0000057;2.84e-11;73!CL:0000192;3.77e-09;43!CL:0002556;4.93e-07;6!CL:0000359;6.67e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.07e-26,76;CL:0000393,3.11e-13,61;CL:0000211,3.11e-13,61;CL:0002620,7.84e-13,23;CL:0000192,6.26e-12,43;CL:0000514,6.26e-12,43;CL:0000680,3.86e-11,58;CL:0000056,3.86e-11,58;CL:0000355,3.86e-11,58;CL:0000187,6.57e-11,55;CL:0000359,2.97e-07,32;CL:0002556,5.05e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;3.77e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.88e-21!365;UBERON:0000914!2.34e-19!83;UBERON:0002329!2.34e-19!83;UBERON:0003077!2.34e-19!83;UBERON:0003059!2.34e-19!83;UBERON:0007282!2.34e-19!83;UBERON:0009618!2.34e-19!83;UBERON:0007285!2.34e-19!83;UBERON:0004290!3.93e-14!70;UBERON:0000486!5.72e-14!82;UBERON:0000468!3.68e-13!659;UBERON:0001134!9.14e-13!61;UBERON:0002036!9.14e-13!61;UBERON:0003082!9.14e-13!61;UBERON:0000481!2.13e-12!347;UBERON:0003102!2.28e-12!95;UBERON:0002385!3.34e-12!63;UBERON:0001015!3.34e-12!63;UBERON:0000383!3.34e-12!63;UBERON:0001444!2.95e-11!48;UBERON:0005256!6.33e-11!143;UBERON:0000467!3.03e-09!625;UBERON:0000480!4.33e-09!626;UBERON:0002100!4.58e-09!216;UBERON:0000033!3.32e-08!123;UBERON:0004573!4.24e-08!33;UBERON:0004571!4.24e-08!33;UBERON:0000153!4.72e-08!129;UBERON:0007811!4.72e-08!129;UBERON:0002049!7.86e-08!79;UBERON:0007798!7.86e-08!79;UBERON:0002097!1.09e-07!40;UBERON:0001637!1.20e-07!42;UBERON:0003509!1.20e-07!42;UBERON:0004572!1.20e-07!42;UBERON:0000922!1.68e-07!612;UBERON:0000119!4.13e-07!312;UBERON:0003104!4.57e-07!238;UBERON:0009142!4.57e-07!238;UBERON:0000075!6.15e-07!13;UBERON:0005944!6.15e-07!13;UBERON:0004288!6.15e-07!13;UBERON:0003089!6.15e-07!13;UBERON:0002199!7.70e-07!45;UBERON:0002416!7.70e-07!45;UBERON:0000483!8.35e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001444;6.02e-08;48!UBERON:0000970;1.26e-07;20!UBERON:0001456;2.20e-07;21!UBERON:0000033;2.30e-07;50!UBERON:0000019;3.92e-07;19!UBERON:0000047;3.92e-07;19!UBERON:0004088;3.92e-07;19!UBERON:0010230;3.92e-07;19!UBERON:0002104;4.78e-07;21!UBERON:0001758;4.93e-07;6!UBERON:0003672;4.93e-07;6!UBERON:0007811;6.53e-07;52!UBERON:0011137;7.17e-07;11!UBERON:0010323;7.17e-07;11!UBERON:0000020;8.13e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.23e-12,99;UBERON:0007524,2.19e-12,73;UBERON:0002329,4.61e-12,71;UBERON:0003059,4.61e-12,71;UBERON:0007282,4.61e-12,71;UBERON:0004290,4.61e-12,71;UBERON:0009618,4.61e-12,71;UBERON:0003077,1.04e-11,72;UBERON:0007285,1.04e-11,72;UBERON:0001134,2.10e-10,62;UBERON:0002036,2.10e-10,62;UBERON:0003082,2.10e-10,62;UBERON:0001444,6.42e-10,49;UBERON:0007503,8.39e-10,78;UBERON:0002385,1.00e-09,64;UBERON:0001015,1.00e-09,64;UBERON:0000383,1.00e-09,64;UBERON:0000486,1.49e-09,83;UBERON:0002097,4.08e-09,41;UBERON:0000033,6.21e-09,56;UBERON:0002199,1.44e-08,46;UBERON:0002416,1.44e-08,46;UBERON:0000153,8.11e-08,62;UBERON:0007811,8.11e-08,62;UBERON:0000970,4.90e-07,21;UBERON:0002104,4.90e-07,21;UBERON:0001758,5.05e-07,6;UBERON:0003672,5.05e-07,6;UBERON:0010323,7.07e-07,11;UBERON:0001456,8.30e-07,22 | |||
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| |||
|short_description=p2@PRSS12 | |||
}} |
Revision as of 02:11, 13 September 2013
Short description: | p2@PRSS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PRSS12_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_NM_003619, uc003ica.1_5end |
EntrezGene: | PRSS12 |
HGNC: | 9477 |
UniProt: | P56730Q96I80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.07e-26 | 76 |
electrically responsive cell | 3.11e-13 | 61 |
electrically active cell | 3.11e-13 | 61 |
skin fibroblast | 7.84e-13 | 23 |
smooth muscle cell | 6.26e-12 | 43 |
smooth muscle myoblast | 6.26e-12 | 43 |
muscle precursor cell | 3.86e-11 | 58 |
myoblast | 3.86e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.86e-11 | 58 |
muscle cell | 6.57e-11 | 55 |
vascular associated smooth muscle cell | 2.97e-07 | 32 |
fibroblast of periodontium | 5.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.23e-12 | 99 |
dense mesenchyme tissue | 2.19e-12 | 73 |
somite | 4.61e-12 | 71 |
presomitic mesoderm | 4.61e-12 | 71 |
presumptive segmental plate | 4.61e-12 | 71 |
dermomyotome | 4.61e-12 | 71 |
trunk paraxial mesoderm | 4.61e-12 | 71 |
paraxial mesoderm | 1.04e-11 | 72 |
presumptive paraxial mesoderm | 1.04e-11 | 72 |
skeletal muscle tissue | 2.10e-10 | 62 |
striated muscle tissue | 2.10e-10 | 62 |
myotome | 2.10e-10 | 62 |
subdivision of head | 6.42e-10 | 49 |
epithelial vesicle | 8.39e-10 | 78 |
muscle tissue | 1.00e-09 | 64 |
musculature | 1.00e-09 | 64 |
musculature of body | 1.00e-09 | 64 |
multilaminar epithelium | 1.49e-09 | 83 |
skin of body | 4.08e-09 | 41 |
head | 6.21e-09 | 56 |
integument | 1.44e-08 | 46 |
integumental system | 1.44e-08 | 46 |
anterior region of body | 8.11e-08 | 62 |
craniocervical region | 8.11e-08 | 62 |
eye | 4.90e-07 | 21 |
visual system | 4.90e-07 | 21 |
periodontium | 5.05e-07 | 6 |
dentition | 5.05e-07 | 6 |
cranial skeletal system | 7.07e-07 | 11 |
face | 8.30e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.