FFCP PHASE1:Hg19::chr4:103265976..103265993,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64116|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20862|TSSclassifier=S|UniProt=Q9C0K1|association_with_transcript=302bp_to_ENST00000394833_5end|coexpression_cluster_id=C137|description=CAGE_peak_11_at_SLC39A8_5end|id=chr4:103265976..103265993,-|ontology_enrichment_celltype=CL:0000037!9.24e-13!172;CL:0000566!9.24e-13!172;CL:0000988!1.06e-12!182;CL:0002032!4.17e-11!165;CL:0000837!4.17e-11!165;CL:0000763!5.37e-07!112;CL:0000049!5.37e-07!112|ontology_enrichment_celltype_v019=CL:0000764;4.69e-14;2!CL:0000558;4.69e-14;2!CL:0002032;2.10e-07;1!CL:0000557;2.10e-07;1|ontology_enrichment_celltype_v019_2=CL:0000764,4.54e-14,2;CL:0000765,4.54e-14,2;CL:0000050,4.54e-14,2;CL:0000038,4.54e-14,2;CL:0000558,4.54e-14,2;CL:0000547,4.54e-14,2;CL:0000549,4.54e-14,2;CL:0000550,4.54e-14,2;CL:0000552,4.54e-14,2|ontology_enrichment_development_v019=UBERON:0008801;2.10e-07;1|ontology_enrichment_disease=DOID:1240!8.63e-14!39;DOID:2531!2.78e-13!51;DOID:0060083!2.78e-13!51;DOID:8692!3.31e-11!31;DOID:1036!2.46e-09!8;DOID:0050686!2.32e-07!137;DOID:162!5.94e-07!235|ontology_enrichment_disease_v019=DOID:1036;3.20e-13;8!DOID:8692;8.58e-12;31!DOID:1240;2.32e-08;39!DOID:8552;4.57e-08;1!DOID:2531;2.73e-07;51!DOID:0060083;2.73e-07;51|ontology_enrichment_disease_v019_2=DOID:1036,3.15e-13,8;DOID:8692,2.85e-12,31;DOID:1240,5.41e-12,39;DOID:2531,7.15e-11,51;DOID:0060083,7.15e-11,51;DOID:8552,4.57e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001831;2.10e-07;1!UBERON:0002171;2.10e-07;1!UBERON:0006518;2.10e-07;1!UBERON:0008949;2.10e-07;1!UBERON:0000101;2.10e-07;1!UBERON:0001567;2.10e-07;1!UBERON:0002167;2.10e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.48e-07,1;UBERON:0006518,1.48e-07,1;UBERON:0008949,1.48e-07,1;UBERON:0000101,1.48e-07,1;UBERON:0002167,1.48e-07,1;UBERON:0001831,2.80e-07,1;UBERON:0001567,2.80e-07,1;UBERON:0008801,2.80e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0.880801318004542,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0.236482229888585,0.689491361473237,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.870627715885752,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,13.2171328579026,8.40762844472304,5.79444986505169,0.393419540227666,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0.444859689486181,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,1.16193942869518,0.621966330092223,0.252320850875628,0.72995471815166,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.968532774145487,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41151501647669,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.77039506583738,7.84306353074702,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.28853842595289,0.569134746787313,0.478278818186467,0.399158742865633,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,1.67043704337145,12.3087398947712,3.2454681417118,0.66614393599564,8.45922030527097,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0,0.251932747854276,0,0.369254416383208,0,0.179736702294654,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,1.18193840883968,0,0.291604613383254,0.173624994933292,0.885741385813839,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64116 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20862 | |||
|TSSclassifier=S | |||
|UniProt=Q9C0K1 | |||
|association_with_transcript=302bp_to_ENST00000394833_5end | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_11_at_SLC39A8_5end | |||
|id=chr4:103265976..103265993,- | |||
|ontology_enrichment_celltype=CL:0000037!9.24e-13!172;CL:0000566!9.24e-13!172;CL:0000988!1.06e-12!182;CL:0002032!4.17e-11!165;CL:0000837!4.17e-11!165;CL:0000763!5.37e-07!112;CL:0000049!5.37e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.69e-14;2!CL:0000558;4.69e-14;2!CL:0002032;2.10e-07;1!CL:0000557;2.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.54e-14,2;CL:0000765,4.54e-14,2;CL:0000050,4.54e-14,2;CL:0000038,4.54e-14,2;CL:0000558,4.54e-14,2;CL:0000547,4.54e-14,2;CL:0000549,4.54e-14,2;CL:0000550,4.54e-14,2;CL:0000552,4.54e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.10e-07;1 | |||
|ontology_enrichment_disease=DOID:1240!8.63e-14!39;DOID:2531!2.78e-13!51;DOID:0060083!2.78e-13!51;DOID:8692!3.31e-11!31;DOID:1036!2.46e-09!8;DOID:0050686!2.32e-07!137;DOID:162!5.94e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.20e-13;8!DOID:8692;8.58e-12;31!DOID:1240;2.32e-08;39!DOID:8552;4.57e-08;1!DOID:2531;2.73e-07;51!DOID:0060083;2.73e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.15e-13,8;DOID:8692,2.85e-12,31;DOID:1240,5.41e-12,39;DOID:2531,7.15e-11,51;DOID:0060083,7.15e-11,51;DOID:8552,4.57e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.10e-07;1!UBERON:0002171;2.10e-07;1!UBERON:0006518;2.10e-07;1!UBERON:0008949;2.10e-07;1!UBERON:0000101;2.10e-07;1!UBERON:0001567;2.10e-07;1!UBERON:0002167;2.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.48e-07,1;UBERON:0006518,1.48e-07,1;UBERON:0008949,1.48e-07,1;UBERON:0000101,1.48e-07,1;UBERON:0002167,1.48e-07,1;UBERON:0001831,2.80e-07,1;UBERON:0001567,2.80e-07,1;UBERON:0008801,2.80e-07,1 | |||
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| |||
|short_description=p11@SLC39A8 | |||
}} |
Revision as of 01:49, 13 September 2013
Short description: | p11@SLC39A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SLC39A8_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 302bp_to_ENST00000394833_5end |
EntrezGene: | SLC39A8 |
HGNC: | 20862 |
UniProt: | Q9C0K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.54e-14 | 2 |
erythroblast | 4.54e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 4.54e-14 | 2 |
erythroid progenitor cell | 4.54e-14 | 2 |
reticulocyte | 4.54e-14 | 2 |
proerythroblast | 4.54e-14 | 2 |
basophilic erythroblast | 4.54e-14 | 2 |
polychromatophilic erythroblast | 4.54e-14 | 2 |
orthochromatic erythroblast | 4.54e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.48e-07 | 1 |
right lung lobe | 1.48e-07 | 1 |
lower lobe of lung | 1.48e-07 | 1 |
lobe of lung | 1.48e-07 | 1 |
right lung | 1.48e-07 | 1 |
parotid gland | 2.80e-07 | 1 |
cheek | 2.80e-07 | 1 |
parotid gland primordium | 2.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.15e-13 | 8 |
myeloid leukemia | 2.85e-12 | 31 |
leukemia | 5.41e-12 | 39 |
hematologic cancer | 7.15e-11 | 51 |
immune system cancer | 7.15e-11 | 51 |
chronic myeloid leukemia | 4.57e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.