FFCP PHASE1:Mm9::chr13:97841582..97841592,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320557|HGNC=|MCL_coexpression_id=13|UniProt=Q5XG69|association_with_transcript=-5bp_to_ENSMUST00000042517,NM_001100458,uc007rnr.2_5end|description=CAGE_peak_5_at_Fam169a_5end|id=chr13:97841582..97841592,+|ontology_enrichment_celltype=CL:0000117!3.29e-12!23;CL:0000337!3.29e-12!23;CL:0000540!9.52e-08!33;CL:0000047!9.52e-08!33;CL:0000031!9.52e-08!33;CL:0000404!9.52e-08!33|ontology_enrichment_celltype_v019_2=CL:0002612,3.10e-27,3;CL:0000117,1.38e-09,23;CL:0000337,1.38e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.62e-21!34;UBERON:0002346!1.36e-20!71;UBERON:0003075!1.36e-20!71;UBERON:0007284!1.36e-20!71;UBERON:0003056!1.33e-19!49;UBERON:0000033!1.10e-18!63;UBERON:0001049!7.09e-17!52;UBERON:0005068!7.09e-17!52;UBERON:0006241!7.09e-17!52;UBERON:0007135!7.09e-17!52;UBERON:0002791!1.31e-15!29;UBERON:0003528!1.31e-15!29;UBERON:0001893!1.31e-15!29;UBERON:0004121!1.57e-15!102;UBERON:0000924!1.57e-15!102;UBERON:0006601!1.57e-15!102;UBERON:0000955!5.33e-14!50;UBERON:0006238!5.33e-14!50;UBERON:0003080!5.57e-14!40;UBERON:0001017!9.50e-14!73;UBERON:0005743!9.50e-14!73;UBERON:0002616!3.45e-13!49;UBERON:0002780!4.22e-13!39;UBERON:0001890!4.22e-13!39;UBERON:0006240!4.22e-13!39;UBERON:0000073!4.71e-13!75;UBERON:0001016!4.71e-13!75;UBERON:0007811!5.34e-11!86;UBERON:0000956!1.55e-10!21;UBERON:0001869!1.55e-10!21;UBERON:0000203!1.55e-10!21;UBERON:0000153!2.32e-10!94;UBERON:0002021!1.95e-09!10;UBERON:0000411!1.95e-09!10;UBERON:0001950!1.95e-09!10;UBERON:0002619!6.82e-09!17;UBERON:0002240!2.97e-07!6;UBERON:0005174!2.97e-07!6;UBERON:0001137!2.97e-07!6;UBERON:0000970!7.26e-07!9;UBERON:0000019!7.26e-07!9;UBERON:0000047!7.26e-07!9;UBERON:0004088!7.26e-07!9;UBERON:0002104!7.26e-07!9;UBERON:0001456!7.26e-07!9;UBERON:0003072!7.26e-07!9;UBERON:0003071!7.26e-07!9;UBERON:0004128!7.26e-07!9;UBERON:0001948!8.31e-07!5;UBERON:0002315!8.31e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.17e-28,5;UBERON:0002315,2.17e-28,5;UBERON:0002257,3.10e-27,3;UBERON:0002240,9.58e-24,6;UBERON:0005174,9.58e-24,6;UBERON:0001137,9.58e-24,6;UBERON:0003076,4.38e-12,12;UBERON:0003057,4.38e-12,12;UBERON:0002020,2.82e-09,34;UBERON:0000073,1.06e-07,54;UBERON:0000489,4.92e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0,0.420649922702764,1.14260393761521,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,1.0214987046815,0.614426133024974,0.131886287730194,0.731901148819277,0.52091337055676,0.558365998002762,0.56276261003168,0.763991238884051,1.17851434189467,1.85083185038834,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0,0.628271760564322,0.521472960576829,0.767146371990992,0.20778804455956,0.486723789203273,0.101839363850316,0,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.816437989815934,0.384341160854549,0.187403449119458,1.29351685369508,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.828503090142008,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0.168956125490778,0,0.2604087696879,0.734015410979976,1.44950472495604,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,3.09335728218638,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0,0.486213434136588,0,0,0,0,0.320919209591815,0,0,0,0.37456602987953,0.256100609619477,0.229741875822453,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0,0,0,0,0,0|short_description=p5@Fam169a}} | ||
|EntrezGene=320557 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q5XG69 | |||
|association_with_transcript=-5bp_to_ENSMUST00000042517,NM_001100458,uc007rnr.2_5end | |||
|description=CAGE_peak_5_at_Fam169a_5end | |||
|id=chr13:97841582..97841592,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.29e-12!23;CL:0000337!3.29e-12!23;CL:0000540!9.52e-08!33;CL:0000047!9.52e-08!33;CL:0000031!9.52e-08!33;CL:0000404!9.52e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,3.10e-27,3;CL:0000117,1.38e-09,23;CL:0000337,1.38e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.62e-21!34;UBERON:0002346!1.36e-20!71;UBERON:0003075!1.36e-20!71;UBERON:0007284!1.36e-20!71;UBERON:0003056!1.33e-19!49;UBERON:0000033!1.10e-18!63;UBERON:0001049!7.09e-17!52;UBERON:0005068!7.09e-17!52;UBERON:0006241!7.09e-17!52;UBERON:0007135!7.09e-17!52;UBERON:0002791!1.31e-15!29;UBERON:0003528!1.31e-15!29;UBERON:0001893!1.31e-15!29;UBERON:0004121!1.57e-15!102;UBERON:0000924!1.57e-15!102;UBERON:0006601!1.57e-15!102;UBERON:0000955!5.33e-14!50;UBERON:0006238!5.33e-14!50;UBERON:0003080!5.57e-14!40;UBERON:0001017!9.50e-14!73;UBERON:0005743!9.50e-14!73;UBERON:0002616!3.45e-13!49;UBERON:0002780!4.22e-13!39;UBERON:0001890!4.22e-13!39;UBERON:0006240!4.22e-13!39;UBERON:0000073!4.71e-13!75;UBERON:0001016!4.71e-13!75;UBERON:0007811!5.34e-11!86;UBERON:0000956!1.55e-10!21;UBERON:0001869!1.55e-10!21;UBERON:0000203!1.55e-10!21;UBERON:0000153!2.32e-10!94;UBERON:0002021!1.95e-09!10;UBERON:0000411!1.95e-09!10;UBERON:0001950!1.95e-09!10;UBERON:0002619!6.82e-09!17;UBERON:0002240!2.97e-07!6;UBERON:0005174!2.97e-07!6;UBERON:0001137!2.97e-07!6;UBERON:0000970!7.26e-07!9;UBERON:0000019!7.26e-07!9;UBERON:0000047!7.26e-07!9;UBERON:0004088!7.26e-07!9;UBERON:0002104!7.26e-07!9;UBERON:0001456!7.26e-07!9;UBERON:0003072!7.26e-07!9;UBERON:0003071!7.26e-07!9;UBERON:0004128!7.26e-07!9;UBERON:0001948!8.31e-07!5;UBERON:0002315!8.31e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.17e-28,5;UBERON:0002315,2.17e-28,5;UBERON:0002257,3.10e-27,3;UBERON:0002240,9.58e-24,6;UBERON:0005174,9.58e-24,6;UBERON:0001137,9.58e-24,6;UBERON:0003076,4.38e-12,12;UBERON:0003057,4.38e-12,12;UBERON:0002020,2.82e-09,34;UBERON:0000073,1.06e-07,54;UBERON:0000489,4.92e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0,0.420649922702764,1.14260393761521,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,1.0214987046815,0.614426133024974,0.131886287730194,0.731901148819277,0.52091337055676,0.558365998002762,0.56276261003168,0.763991238884051,1.17851434189467,1.85083185038834,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0,0.628271760564322,0.521472960576829,0.767146371990992,0.20778804455956,0.486723789203273,0.101839363850316,0,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.816437989815934,0.384341160854549,0.187403449119458,1.29351685369508,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.828503090142008,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0.168956125490778,0,0.2604087696879,0.734015410979976,1.44950472495604,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,3.09335728218638,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0,0.486213434136588,0,0,0,0,0.320919209591815,0,0,0,0.37456602987953,0.256100609619477,0.229741875822453,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0,0,0,0,0,0 | |||
|short_description=p5@Fam169a | |||
}} |
Revision as of 01:21, 13 September 2013
Short description: | p5@Fam169a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fam169a_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -5bp_to_ENSMUST00000042517, NM_001100458, uc007rnr.2_5end |
EntrezGene: | Fam169a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 3.10e-27 | 3 |
CNS neuron (sensu Vertebrata) | 1.38e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 2.17e-28 | 5 |
gray matter of spinal cord | 2.17e-28 | 5 |
ventral horn of spinal cord | 3.10e-27 | 3 |
spinal cord | 9.58e-24 | 6 |
dorsal region element | 9.58e-24 | 6 |
dorsum | 9.58e-24 | 6 |
posterior neural tube | 4.38e-12 | 12 |
chordal neural plate | 4.38e-12 | 12 |
gray matter | 2.82e-09 | 34 |
regional part of nervous system | 1.06e-07 | 54 |
cavitated compound organ | 4.92e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.