FFCP PHASE1:Mm9::chr13:93616609..93616624,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1978|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:93616609..93616624,+|id=chr13:93616609..93616624,+|ontology_enrichment_celltype=CL:0000239!2.01e-09!6;CL:0000677!2.01e-09!6;CL:0000212!2.01e-09!6;CL:0000584!2.01e-09!6;CL:0002563!5.09e-08!9;CL:0002251!5.09e-08!9;CL:0000075!6.05e-08!7|ontology_enrichment_celltype_v019_2=CL:0000182,1.52e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.27e-18!43;UBERON:0005409!4.51e-16!59;UBERON:0000344!3.82e-13!15;UBERON:0001007!1.16e-12!128;UBERON:0001555!1.16e-12!128;UBERON:0007026!1.16e-12!128;UBERON:0004119!2.69e-12!130;UBERON:0000925!2.69e-12!130;UBERON:0006595!2.69e-12!130;UBERON:0004921!2.78e-11!126;UBERON:0004185!2.78e-11!126;UBERON:0001242!7.32e-11!13;UBERON:0000060!7.32e-11!13;UBERON:0001262!7.32e-11!13;UBERON:0004786!7.32e-11!13;UBERON:0003350!5.09e-08!9;UBERON:0004808!5.09e-08!9;UBERON:0001277!5.09e-08!9;UBERON:0002107!3.07e-07!22;UBERON:0007499!3.07e-07!22;UBERON:0006925!3.07e-07!22;UBERON:0009497!3.07e-07!22;UBERON:0000015!3.07e-07!22;UBERON:0002423!3.07e-07!22;UBERON:0006235!3.07e-07!22;UBERON:0008835!3.07e-07!22;UBERON:0003894!3.07e-07!22;UBERON:0004161!3.07e-07!22;UBERON:0008836!3.07e-07!22;UBERON:0004923!4.10e-07!24;UBERON:0009854!8.24e-07!23;UBERON:0009856!8.24e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.47e-32,31;UBERON:0005409,4.71e-20,47;UBERON:0004921,2.28e-15,114;UBERON:0001007,4.88e-15,116;UBERON:0001555,4.88e-15,116;UBERON:0007026,4.88e-15,116;UBERON:0004119,1.02e-14,118;UBERON:0000925,1.02e-14,118;UBERON:0006595,1.02e-14,118;UBERON:0002107,1.39e-07,22;UBERON:0007499,1.39e-07,22;UBERON:0006925,1.39e-07,22;UBERON:0009497,1.39e-07,22;UBERON:0000015,1.39e-07,22;UBERON:0002423,1.39e-07,22;UBERON:0006235,1.39e-07,22;UBERON:0008835,1.39e-07,22;UBERON:0003894,1.39e-07,22;UBERON:0004161,1.39e-07,22;UBERON:0008836,1.39e-07,22;UBERON:0011216,2.10e-07,194;UBERON:0009854,3.24e-07,23;UBERON:0009856,3.24e-07,23|phase1_expression=0,0.348975407639361,0.909998478779072,10.5862473957391,8.01433167914156,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.22940928106717,0,0.430761996159075,0,0.760093677825496,1.00812051903972,0,0,0,0,0.866554859253824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,4.31762553310254,1.94932925234301,2.68816132258401,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,1.58670339998127,0,0,0.128867461322093,1.81515172161008,2.2237804384487,1.71203063501303,1.42358718463353,1.81168850196412,2.5133520880027,2.78539060857611,1.75467678407208,3.59527763461689,0.864552199498777,4.18196673834171,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0.889357881261447,0,0,0,0,0,0,0,1.13494658742525,0.549122826376163,0,1.86070473834252,0.936113019343682,0,1.25578189465339,10.6137574699941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0,0,0,0.338458431566706,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0.859484216193193,0,0,0|short_description=p@chr13:93616609..93616624,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1978 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:93616609..93616624,+ | |||
|id=chr13:93616609..93616624,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.01e-09!6;CL:0000677!2.01e-09!6;CL:0000212!2.01e-09!6;CL:0000584!2.01e-09!6;CL:0002563!5.09e-08!9;CL:0002251!5.09e-08!9;CL:0000075!6.05e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.52e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.27e-18!43;UBERON:0005409!4.51e-16!59;UBERON:0000344!3.82e-13!15;UBERON:0001007!1.16e-12!128;UBERON:0001555!1.16e-12!128;UBERON:0007026!1.16e-12!128;UBERON:0004119!2.69e-12!130;UBERON:0000925!2.69e-12!130;UBERON:0006595!2.69e-12!130;UBERON:0004921!2.78e-11!126;UBERON:0004185!2.78e-11!126;UBERON:0001242!7.32e-11!13;UBERON:0000060!7.32e-11!13;UBERON:0001262!7.32e-11!13;UBERON:0004786!7.32e-11!13;UBERON:0003350!5.09e-08!9;UBERON:0004808!5.09e-08!9;UBERON:0001277!5.09e-08!9;UBERON:0002107!3.07e-07!22;UBERON:0007499!3.07e-07!22;UBERON:0006925!3.07e-07!22;UBERON:0009497!3.07e-07!22;UBERON:0000015!3.07e-07!22;UBERON:0002423!3.07e-07!22;UBERON:0006235!3.07e-07!22;UBERON:0008835!3.07e-07!22;UBERON:0003894!3.07e-07!22;UBERON:0004161!3.07e-07!22;UBERON:0008836!3.07e-07!22;UBERON:0004923!4.10e-07!24;UBERON:0009854!8.24e-07!23;UBERON:0009856!8.24e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.47e-32,31;UBERON:0005409,4.71e-20,47;UBERON:0004921,2.28e-15,114;UBERON:0001007,4.88e-15,116;UBERON:0001555,4.88e-15,116;UBERON:0007026,4.88e-15,116;UBERON:0004119,1.02e-14,118;UBERON:0000925,1.02e-14,118;UBERON:0006595,1.02e-14,118;UBERON:0002107,1.39e-07,22;UBERON:0007499,1.39e-07,22;UBERON:0006925,1.39e-07,22;UBERON:0009497,1.39e-07,22;UBERON:0000015,1.39e-07,22;UBERON:0002423,1.39e-07,22;UBERON:0006235,1.39e-07,22;UBERON:0008835,1.39e-07,22;UBERON:0003894,1.39e-07,22;UBERON:0004161,1.39e-07,22;UBERON:0008836,1.39e-07,22;UBERON:0011216,2.10e-07,194;UBERON:0009854,3.24e-07,23;UBERON:0009856,3.24e-07,23 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,10.5862473957391,8.01433167914156,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.22940928106717,0,0.430761996159075,0,0.760093677825496,1.00812051903972,0,0,0,0,0.866554859253824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,4.31762553310254,1.94932925234301,2.68816132258401,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,1.58670339998127,0,0,0.128867461322093,1.81515172161008,2.2237804384487,1.71203063501303,1.42358718463353,1.81168850196412,2.5133520880027,2.78539060857611,1.75467678407208,3.59527763461689,0.864552199498777,4.18196673834171,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0.889357881261447,0,0,0,0,0,0,0,1.13494658742525,0.549122826376163,0,1.86070473834252,0.936113019343682,0,1.25578189465339,10.6137574699941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0,0,0,0.338458431566706,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0.859484216193193,0,0,0 | |||
|short_description=p@chr13:93616609..93616624,+ | |||
}} |
Revision as of 01:17, 13 September 2013
Short description: | p@chr13:93616609..93616624, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:93616609..93616624, + |
Coexpression cluster: | MCL_coexpression_mm9:1978 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.52e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.47e-32 | 31 |
gastrointestinal system | 4.71e-20 | 47 |
subdivision of digestive tract | 2.28e-15 | 114 |
digestive system | 4.88e-15 | 116 |
digestive tract | 4.88e-15 | 116 |
primitive gut | 4.88e-15 | 116 |
endoderm-derived structure | 1.02e-14 | 118 |
endoderm | 1.02e-14 | 118 |
presumptive endoderm | 1.02e-14 | 118 |
liver | 1.39e-07 | 22 |
epithelial sac | 1.39e-07 | 22 |
digestive gland | 1.39e-07 | 22 |
epithelium of foregut-midgut junction | 1.39e-07 | 22 |
anatomical boundary | 1.39e-07 | 22 |
hepatobiliary system | 1.39e-07 | 22 |
foregut-midgut junction | 1.39e-07 | 22 |
hepatic diverticulum | 1.39e-07 | 22 |
liver primordium | 1.39e-07 | 22 |
septum transversum | 1.39e-07 | 22 |
liver bud | 1.39e-07 | 22 |
organ system subdivision | 2.10e-07 | 194 |
digestive tract diverticulum | 3.24e-07 | 23 |
sac | 3.24e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.