FFCP PHASE1:Mm9::chr13:83748498..83748516,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:83748498..83748516,-|id=chr13:83748498..83748516,-|ontology_enrichment_celltype=CL:0000988!3.27e-23!32;CL:0002032!3.27e-23!32;CL:0000037!3.27e-23!32;CL:0000566!3.27e-23!32;CL:0000837!3.27e-23!32;CL:0002320!1.03e-18!46;CL:0000134!1.03e-18!46;CL:0000049!2.50e-18!19;CL:0000553!1.04e-15!6;CL:0000556!1.04e-15!6;CL:0000219!2.91e-15!54;CL:0000034!5.29e-13!97;CL:0002031!9.95e-13!25;CL:0000763!3.74e-12!16;CL:0000063!1.16e-11!66;CL:0000414!5.67e-11!11;CL:0000723!1.71e-10!91;CL:0000048!1.71e-10!91;CL:0000050!3.05e-10!9;CL:0000144!2.73e-09!121;CL:0000012!2.73e-09!121;CL:0002027!3.42e-08!3;CL:0002006!3.42e-08!3;CL:0002024!3.42e-08!3;CL:0000838!3.48e-07!12;CL:0002371!6.24e-07!118;CL:0000839!7.10e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,2.50e-20,32;CL:0002032,2.50e-20,32;CL:0000037,2.50e-20,32;CL:0000837,2.50e-20,32;CL:0000049,1.15e-19,19;CL:0002320,1.29e-13,46;CL:0000134,1.29e-13,46;CL:0000219,2.47e-11,54;CL:0000763,1.51e-10,16;CL:0000723,6.03e-10,91;CL:0000048,6.03e-10,91;CL:0000034,3.43e-09,97;CL:0000553,5.11e-08,6;CL:0000556,5.11e-08,6;CL:0002031,9.62e-07,25|ontology_enrichment_disease=DOID:0060100!6.12e-09!3;DOID:4045!6.12e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-15,3;DOID:4045,4.00e-15,3;DOID:0050686,7.92e-08,6|ontology_enrichment_uberon=UBERON:0002384!1.03e-18!46;UBERON:0002371!6.27e-15!16;UBERON:0002204!2.20e-13!32;UBERON:0001474!1.99e-12!22;UBERON:0004765!1.99e-12!22;UBERON:0001434!1.99e-12!22|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.29e-13,46;UBERON:0002204,4.03e-11,32;UBERON:0002371,1.51e-10,16;UBERON:0001474,1.49e-07,22;UBERON:0004765,1.49e-07,22;UBERON:0001434,1.49e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0.666219523631325,0.404950534779652,0.699561878128147,2.36596624018678,1.91960207048034,3.81950686618227,0,1.29078236561151,3.39559725880616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,1.57057123192139,63.5290007073495,8.87959130445979,9.22469670759192,0,0,0,0,0,0,0,0,0,9.2280433331755,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,2.87556298814209,1.79970819298022,3.81210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,1.40442637462647,2.31613116403244,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:83748498..83748516,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:83748498..83748516,- | |||
|id=chr13:83748498..83748516,- | |||
|ontology_enrichment_celltype=CL:0000988!3.27e-23!32;CL:0002032!3.27e-23!32;CL:0000037!3.27e-23!32;CL:0000566!3.27e-23!32;CL:0000837!3.27e-23!32;CL:0002320!1.03e-18!46;CL:0000134!1.03e-18!46;CL:0000049!2.50e-18!19;CL:0000553!1.04e-15!6;CL:0000556!1.04e-15!6;CL:0000219!2.91e-15!54;CL:0000034!5.29e-13!97;CL:0002031!9.95e-13!25;CL:0000763!3.74e-12!16;CL:0000063!1.16e-11!66;CL:0000414!5.67e-11!11;CL:0000723!1.71e-10!91;CL:0000048!1.71e-10!91;CL:0000050!3.05e-10!9;CL:0000144!2.73e-09!121;CL:0000012!2.73e-09!121;CL:0002027!3.42e-08!3;CL:0002006!3.42e-08!3;CL:0002024!3.42e-08!3;CL:0000838!3.48e-07!12;CL:0002371!6.24e-07!118;CL:0000839!7.10e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.50e-20,32;CL:0002032,2.50e-20,32;CL:0000037,2.50e-20,32;CL:0000837,2.50e-20,32;CL:0000049,1.15e-19,19;CL:0002320,1.29e-13,46;CL:0000134,1.29e-13,46;CL:0000219,2.47e-11,54;CL:0000763,1.51e-10,16;CL:0000723,6.03e-10,91;CL:0000048,6.03e-10,91;CL:0000034,3.43e-09,97;CL:0000553,5.11e-08,6;CL:0000556,5.11e-08,6;CL:0002031,9.62e-07,25 | |||
|ontology_enrichment_disease=DOID:0060100!6.12e-09!3;DOID:4045!6.12e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-15,3;DOID:4045,4.00e-15,3;DOID:0050686,7.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.03e-18!46;UBERON:0002371!6.27e-15!16;UBERON:0002204!2.20e-13!32;UBERON:0001474!1.99e-12!22;UBERON:0004765!1.99e-12!22;UBERON:0001434!1.99e-12!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.29e-13,46;UBERON:0002204,4.03e-11,32;UBERON:0002371,1.51e-10,16;UBERON:0001474,1.49e-07,22;UBERON:0004765,1.49e-07,22;UBERON:0001434,1.49e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0.666219523631325,0.404950534779652,0.699561878128147,2.36596624018678,1.91960207048034,3.81950686618227,0,1.29078236561151,3.39559725880616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,1.57057123192139,63.5290007073495,8.87959130445979,9.22469670759192,0,0,0,0,0,0,0,0,0,9.2280433331755,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,2.87556298814209,1.79970819298022,3.81210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0,0,0,1.40442637462647,2.31613116403244,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:83748498..83748516,- | |||
}} |
Revision as of 01:11, 13 September 2013
Short description: | p@chr13:83748498..83748516, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83748498..83748516, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.50e-20 | 32 |
hematopoietic oligopotent progenitor cell | 2.50e-20 | 32 |
hematopoietic stem cell | 2.50e-20 | 32 |
hematopoietic multipotent progenitor cell | 2.50e-20 | 32 |
common myeloid progenitor | 1.15e-19 | 19 |
connective tissue cell | 1.29e-13 | 46 |
mesenchymal cell | 1.29e-13 | 46 |
motile cell | 2.47e-11 | 54 |
myeloid cell | 1.51e-10 | 16 |
somatic stem cell | 6.03e-10 | 91 |
multi fate stem cell | 6.03e-10 | 91 |
stem cell | 3.43e-09 | 97 |
megakaryocyte progenitor cell | 5.11e-08 | 6 |
megakaryocyte | 5.11e-08 | 6 |
hematopoietic lineage restricted progenitor cell | 9.62e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.29e-13 | 46 |
musculoskeletal system | 4.03e-11 | 32 |
bone marrow | 1.51e-10 | 16 |
bone element | 1.49e-07 | 22 |
skeletal element | 1.49e-07 | 22 |
skeletal system | 1.49e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.00e-15 | 3 |
muscle cancer | 4.00e-15 | 3 |
organ system cancer | 7.92e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.