FFCP PHASE1:Mm9::chr13:54833079..54833089,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=217|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:54833079..54833089,+|id=chr13:54833079..54833089,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.45e-14!59;UBERON:0000160!1.08e-13!43;UBERON:0001007!1.67e-07!128;UBERON:0001555!1.67e-07!128;UBERON:0007026!1.67e-07!128;UBERON:0004119!2.68e-07!130;UBERON:0000925!2.68e-07!130;UBERON:0006595!2.68e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.77e-30,31;UBERON:0005409,6.49e-20,47;UBERON:0004921,9.12e-08,114;UBERON:0001007,1.29e-07,116;UBERON:0001555,1.29e-07,116;UBERON:0007026,1.29e-07,116;UBERON:0004119,1.79e-07,118;UBERON:0000925,1.79e-07,118;UBERON:0006595,1.79e-07,118|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,1.32225283331772,0,0,0,1.4117846723634,0.667134131534611,0.570676878337677,1.89811624617805,0.494096864172033,1.25667604400135,1.39269530428806,1.36474860983384,0,4.75503709724327,4.38110801159608,0,0,0,0,0,0,0.252946148497029,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.165306911450672,0,0.90730481304255,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr13:54833079..54833089,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=217 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:54833079..54833089,+ | |||
|id=chr13:54833079..54833089,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.45e-14!59;UBERON:0000160!1.08e-13!43;UBERON:0001007!1.67e-07!128;UBERON:0001555!1.67e-07!128;UBERON:0007026!1.67e-07!128;UBERON:0004119!2.68e-07!130;UBERON:0000925!2.68e-07!130;UBERON:0006595!2.68e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.77e-30,31;UBERON:0005409,6.49e-20,47;UBERON:0004921,9.12e-08,114;UBERON:0001007,1.29e-07,116;UBERON:0001555,1.29e-07,116;UBERON:0007026,1.29e-07,116;UBERON:0004119,1.79e-07,118;UBERON:0000925,1.79e-07,118;UBERON:0006595,1.79e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,1.32225283331772,0,0,0,1.4117846723634,0.667134131534611,0.570676878337677,1.89811624617805,0.494096864172033,1.25667604400135,1.39269530428806,1.36474860983384,0,4.75503709724327,4.38110801159608,0,0,0,0,0,0,0.252946148497029,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.165306911450672,0,0.90730481304255,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:54833079..54833089,+ | |||
}} |
Revision as of 00:48, 13 September 2013
Short description: | p@chr13:54833079..54833089, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54833079..54833089, + |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.77e-30 | 31 |
gastrointestinal system | 6.49e-20 | 47 |
subdivision of digestive tract | 9.12e-08 | 114 |
digestive system | 1.29e-07 | 116 |
digestive tract | 1.29e-07 | 116 |
primitive gut | 1.29e-07 | 116 |
endoderm-derived structure | 1.79e-07 | 118 |
endoderm | 1.79e-07 | 118 |
presumptive endoderm | 1.79e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.