FFCP PHASE1:Mm9::chr13:52728696..52728706,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=165|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:52728696..52728706,+|id=chr13:52728696..52728706,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,3.06e-09,19;CL:0000553,2.08e-08,6;CL:0000556,2.08e-08,6;CL:0000763,6.67e-08,16;CL:0000988,4.11e-07,32;CL:0002032,4.11e-07,32;CL:0000037,4.11e-07,32;CL:0000837,4.11e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.30e-07,3;DOID:4045,4.30e-07,3|ontology_enrichment_uberon=UBERON:0003081!2.61e-09!88;UBERON:0004872!9.02e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0003887,4.39e-08,10;UBERON:0002106,4.83e-08,6;UBERON:0004457,4.83e-08,6;UBERON:0000042,4.83e-08,6;UBERON:0004854,4.83e-08,6;UBERON:0009034,4.83e-08,6;UBERON:0002095,4.83e-08,6;UBERON:0004782,4.83e-08,6;UBERON:0003281,4.83e-08,6;UBERON:0009664,4.83e-08,6;UBERON:0002296,4.83e-08,6;UBERON:0005602,4.83e-08,6;UBERON:0001179,4.83e-08,6;UBERON:0006293,4.83e-08,6;UBERON:0002371,6.67e-08,16;UBERON:0002193,2.60e-07,48;UBERON:0002405,2.60e-07,48;UBERON:0002204,6.06e-07,32|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0,2.68142840554502,3.97631857456642,5.51706547337439,0,0.893618560807968,0.522399578277871,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,1.25559489221072,0.7813353445238,1.0470474879476,4.70585190424811,1.36609096991689,0.971020706062307,0,0.202753862439029,0,0,0,0,0,0,0,3.52343472721246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.43778149407104,0,0.889491589511453,0,0,0,0,0,0,0,0,0.497627882440372,1.26361379216837,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,1.42081749697796,0,0.234526059981096,0.540186184383045,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0,0.16455984991348,0.492502392237286,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.810676133875177,0,4.31304619582064,0.744281895337007,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0.664394068946325,0.159454768657487,0.983179888294428,0.345369963731791,0.144649058581512,3.01582567878545,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0.322928853391811,0.120625849856312,0.119372344003136,0,0.291480836629851,0,1.53783792718067,0,0.185194527369712,1.50694765603753,2.59719032669948,0.686334519619568,1.01987057996313,0.69975726161829,0.414599921413271,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0,0.487289403698762,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr13:52728696..52728706,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=165 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:52728696..52728706,+ | |||
|id=chr13:52728696..52728706,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.06e-09,19;CL:0000553,2.08e-08,6;CL:0000556,2.08e-08,6;CL:0000763,6.67e-08,16;CL:0000988,4.11e-07,32;CL:0002032,4.11e-07,32;CL:0000037,4.11e-07,32;CL:0000837,4.11e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.30e-07,3;DOID:4045,4.30e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003081!2.61e-09!88;UBERON:0004872!9.02e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003887,4.39e-08,10;UBERON:0002106,4.83e-08,6;UBERON:0004457,4.83e-08,6;UBERON:0000042,4.83e-08,6;UBERON:0004854,4.83e-08,6;UBERON:0009034,4.83e-08,6;UBERON:0002095,4.83e-08,6;UBERON:0004782,4.83e-08,6;UBERON:0003281,4.83e-08,6;UBERON:0009664,4.83e-08,6;UBERON:0002296,4.83e-08,6;UBERON:0005602,4.83e-08,6;UBERON:0001179,4.83e-08,6;UBERON:0006293,4.83e-08,6;UBERON:0002371,6.67e-08,16;UBERON:0002193,2.60e-07,48;UBERON:0002405,2.60e-07,48;UBERON:0002204,6.06e-07,32 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0,2.68142840554502,3.97631857456642,5.51706547337439,0,0.893618560807968,0.522399578277871,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,1.25559489221072,0.7813353445238,1.0470474879476,4.70585190424811,1.36609096991689,0.971020706062307,0,0.202753862439029,0,0,0,0,0,0,0,3.52343472721246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.43778149407104,0,0.889491589511453,0,0,0,0,0,0,0,0,0.497627882440372,1.26361379216837,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,1.42081749697796,0,0.234526059981096,0.540186184383045,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0,0.16455984991348,0.492502392237286,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.810676133875177,0,4.31304619582064,0.744281895337007,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0.664394068946325,0.159454768657487,0.983179888294428,0.345369963731791,0.144649058581512,3.01582567878545,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0.322928853391811,0.120625849856312,0.119372344003136,0,0.291480836629851,0,1.53783792718067,0,0.185194527369712,1.50694765603753,2.59719032669948,0.686334519619568,1.01987057996313,0.69975726161829,0.414599921413271,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0,0.487289403698762,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr13:52728696..52728706,+ | |||
}} |
Revision as of 00:45, 13 September 2013
Short description: | p@chr13:52728696..52728706, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:52728696..52728706, + |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.06e-09 | 19 |
megakaryocyte progenitor cell | 2.08e-08 | 6 |
megakaryocyte | 2.08e-08 | 6 |
myeloid cell | 6.67e-08 | 16 |
hematopoietic cell | 4.11e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.11e-07 | 32 |
hematopoietic stem cell | 4.11e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.11e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
intraembryonic coelom | 4.39e-08 | 10 |
spleen | 4.83e-08 | 6 |
cavity lining | 4.83e-08 | 6 |
serous membrane | 4.83e-08 | 6 |
gastrointestinal system mesentery | 4.83e-08 | 6 |
stomach region | 4.83e-08 | 6 |
mesentery | 4.83e-08 | 6 |
gastrointestinal system serosa | 4.83e-08 | 6 |
mesentery of stomach | 4.83e-08 | 6 |
gut mesentery | 4.83e-08 | 6 |
dorsal mesentery | 4.83e-08 | 6 |
dorsal mesogastrium | 4.83e-08 | 6 |
peritoneal cavity | 4.83e-08 | 6 |
spleen primordium | 4.83e-08 | 6 |
bone marrow | 6.67e-08 | 16 |
hemolymphoid system | 2.60e-07 | 48 |
immune system | 2.60e-07 | 48 |
musculoskeletal system | 6.06e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.30e-07 | 3 |
muscle cancer | 4.30e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.