FFCP PHASE1:Mm9::chr13:30095241..30095252,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:30095241..30095252,+|id=chr13:30095241..30095252,+|ontology_enrichment_celltype=CL:0000553!1.09e-14!6;CL:0000556!1.09e-14!6;CL:0000050!1.74e-09!9;CL:0002027!6.16e-08!3;CL:0002006!6.16e-08!3;CL:0002024!6.16e-08!3;CL:0000414!1.36e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,8.77e-41,6;CL:0000556,8.77e-41,6;CL:0000050,2.56e-27,9;CL:0000839,5.23e-19,13;CL:0000763,1.72e-15,16;CL:0002031,3.78e-14,25;CL:0002027,1.20e-13,3;CL:0002006,1.20e-13,3;CL:0002024,1.20e-13,3;CL:0000049,4.47e-13,19;CL:0000945,2.90e-11,1;CL:0000236,2.90e-11,1;CL:0000826,2.90e-11,1;CL:0000988,4.73e-11,32;CL:0002032,4.73e-11,32;CL:0000037,4.73e-11,32;CL:0000837,4.73e-11,32;CL:0002320,1.16e-07,46;CL:0000134,1.16e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!2.20e-09!6;UBERON:0004457!2.20e-09!6;UBERON:0000042!2.20e-09!6;UBERON:0004854!2.20e-09!6;UBERON:0009034!2.20e-09!6;UBERON:0002095!2.20e-09!6;UBERON:0004782!2.20e-09!6;UBERON:0003281!2.20e-09!6;UBERON:0009664!2.20e-09!6;UBERON:0002296!2.20e-09!6;UBERON:0005602!2.20e-09!6;UBERON:0001179!2.20e-09!6;UBERON:0006293!2.20e-09!6|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-15,16;UBERON:0002193,9.48e-13,48;UBERON:0002405,9.48e-13,48;UBERON:0001474,2.57e-11,22;UBERON:0004765,2.57e-11,22;UBERON:0001434,2.57e-11,22;UBERON:0000029,4.58e-11,1;UBERON:0001097,4.58e-11,1;UBERON:0003968,4.58e-11,1;UBERON:0001467,4.58e-11,1;UBERON:0002390,1.91e-10,45;UBERON:0003061,1.91e-10,45;UBERON:0002204,8.16e-08,32;UBERON:0002384,1.16e-07,46;UBERON:0002106,2.73e-07,6;UBERON:0004457,2.73e-07,6;UBERON:0000042,2.73e-07,6;UBERON:0004854,2.73e-07,6;UBERON:0009034,2.73e-07,6;UBERON:0002095,2.73e-07,6;UBERON:0004782,2.73e-07,6;UBERON:0003281,2.73e-07,6;UBERON:0009664,2.73e-07,6;UBERON:0002296,2.73e-07,6;UBERON:0005602,2.73e-07,6;UBERON:0001179,2.73e-07,6;UBERON:0006293,2.73e-07,6|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,1.66554880907831,1.01237633694913,0.699561878128147,8.67520954735154,6.30726394586398,2.54633791078818,0,0,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,3.18786951509699,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0,0.521472960576829,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,1.36696704638282,0,0.185194527369712,0.376736914009382,1.0935538217682,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr13:30095241..30095252,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:30095241..30095252,+ | |||
|id=chr13:30095241..30095252,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.09e-14!6;CL:0000556!1.09e-14!6;CL:0000050!1.74e-09!9;CL:0002027!6.16e-08!3;CL:0002006!6.16e-08!3;CL:0002024!6.16e-08!3;CL:0000414!1.36e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.77e-41,6;CL:0000556,8.77e-41,6;CL:0000050,2.56e-27,9;CL:0000839,5.23e-19,13;CL:0000763,1.72e-15,16;CL:0002031,3.78e-14,25;CL:0002027,1.20e-13,3;CL:0002006,1.20e-13,3;CL:0002024,1.20e-13,3;CL:0000049,4.47e-13,19;CL:0000945,2.90e-11,1;CL:0000236,2.90e-11,1;CL:0000826,2.90e-11,1;CL:0000988,4.73e-11,32;CL:0002032,4.73e-11,32;CL:0000037,4.73e-11,32;CL:0000837,4.73e-11,32;CL:0002320,1.16e-07,46;CL:0000134,1.16e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.20e-09!6;UBERON:0004457!2.20e-09!6;UBERON:0000042!2.20e-09!6;UBERON:0004854!2.20e-09!6;UBERON:0009034!2.20e-09!6;UBERON:0002095!2.20e-09!6;UBERON:0004782!2.20e-09!6;UBERON:0003281!2.20e-09!6;UBERON:0009664!2.20e-09!6;UBERON:0002296!2.20e-09!6;UBERON:0005602!2.20e-09!6;UBERON:0001179!2.20e-09!6;UBERON:0006293!2.20e-09!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-15,16;UBERON:0002193,9.48e-13,48;UBERON:0002405,9.48e-13,48;UBERON:0001474,2.57e-11,22;UBERON:0004765,2.57e-11,22;UBERON:0001434,2.57e-11,22;UBERON:0000029,4.58e-11,1;UBERON:0001097,4.58e-11,1;UBERON:0003968,4.58e-11,1;UBERON:0001467,4.58e-11,1;UBERON:0002390,1.91e-10,45;UBERON:0003061,1.91e-10,45;UBERON:0002204,8.16e-08,32;UBERON:0002384,1.16e-07,46;UBERON:0002106,2.73e-07,6;UBERON:0004457,2.73e-07,6;UBERON:0000042,2.73e-07,6;UBERON:0004854,2.73e-07,6;UBERON:0009034,2.73e-07,6;UBERON:0002095,2.73e-07,6;UBERON:0004782,2.73e-07,6;UBERON:0003281,2.73e-07,6;UBERON:0009664,2.73e-07,6;UBERON:0002296,2.73e-07,6;UBERON:0005602,2.73e-07,6;UBERON:0001179,2.73e-07,6;UBERON:0006293,2.73e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,1.66554880907831,1.01237633694913,0.699561878128147,8.67520954735154,6.30726394586398,2.54633791078818,0,0,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,3.18786951509699,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0,0.521472960576829,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,1.36696704638282,0,0.185194527369712,0.376736914009382,1.0935538217682,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr13:30095241..30095252,+ | |||
}} |
Revision as of 00:19, 13 September 2013
Short description: | p@chr13:30095241..30095252, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:30095241..30095252, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.77e-41 | 6 |
megakaryocyte | 8.77e-41 | 6 |
megakaryocyte-erythroid progenitor cell | 2.56e-27 | 9 |
myeloid lineage restricted progenitor cell | 5.23e-19 | 13 |
myeloid cell | 1.72e-15 | 16 |
hematopoietic lineage restricted progenitor cell | 3.78e-14 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 1.20e-13 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.20e-13 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.20e-13 | 3 |
common myeloid progenitor | 4.47e-13 | 19 |
lymphocyte of B lineage | 2.90e-11 | 1 |
B cell | 2.90e-11 | 1 |
pro-B cell | 2.90e-11 | 1 |
hematopoietic cell | 4.73e-11 | 32 |
hematopoietic oligopotent progenitor cell | 4.73e-11 | 32 |
hematopoietic stem cell | 4.73e-11 | 32 |
hematopoietic multipotent progenitor cell | 4.73e-11 | 32 |
connective tissue cell | 1.16e-07 | 46 |
mesenchymal cell | 1.16e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-15 | 16 |
hemolymphoid system | 9.48e-13 | 48 |
immune system | 9.48e-13 | 48 |
bone element | 2.57e-11 | 22 |
skeletal element | 2.57e-11 | 22 |
skeletal system | 2.57e-11 | 22 |
lymph node | 4.58e-11 | 1 |
axillary lymph node | 4.58e-11 | 1 |
peripheral lymph node | 4.58e-11 | 1 |
shoulder | 4.58e-11 | 1 |
hematopoietic system | 1.91e-10 | 45 |
blood island | 1.91e-10 | 45 |
musculoskeletal system | 8.16e-08 | 32 |
connective tissue | 1.16e-07 | 46 |
spleen | 2.73e-07 | 6 |
cavity lining | 2.73e-07 | 6 |
serous membrane | 2.73e-07 | 6 |
gastrointestinal system mesentery | 2.73e-07 | 6 |
stomach region | 2.73e-07 | 6 |
mesentery | 2.73e-07 | 6 |
gastrointestinal system serosa | 2.73e-07 | 6 |
mesentery of stomach | 2.73e-07 | 6 |
gut mesentery | 2.73e-07 | 6 |
dorsal mesentery | 2.73e-07 | 6 |
dorsal mesogastrium | 2.73e-07 | 6 |
peritoneal cavity | 2.73e-07 | 6 |
spleen primordium | 2.73e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.