FFCP PHASE1:Mm9::chr13:29106275..29106280,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77920|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-2bp_to_NR_045077_5end|description=CAGE_peak_1_at_A330102I10Rik_5end|id=chr13:29106275..29106280,+|ontology_enrichment_celltype=CL:0000117!6.69e-10!23;CL:0000337!6.69e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.57e-11,23;CL:0000337,7.57e-11,23;CL:0002612,8.57e-09,3;CL:0002614,4.43e-08,3;CL:0000540,7.04e-07,33;CL:0000047,7.04e-07,33;CL:0000031,7.04e-07,33;CL:0000404,7.04e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.32e-21!52;UBERON:0005068!8.32e-21!52;UBERON:0006241!8.32e-21!52;UBERON:0007135!8.32e-21!52;UBERON:0001017!8.55e-19!73;UBERON:0005743!8.55e-19!73;UBERON:0002020!9.11e-19!34;UBERON:0000073!1.31e-18!75;UBERON:0001016!1.31e-18!75;UBERON:0000033!2.07e-17!63;UBERON:0000955!4.68e-17!50;UBERON:0006238!4.68e-17!50;UBERON:0002346!6.51e-17!71;UBERON:0003075!6.51e-17!71;UBERON:0007284!6.51e-17!71;UBERON:0004121!8.91e-17!102;UBERON:0000924!8.91e-17!102;UBERON:0006601!8.91e-17!102;UBERON:0002616!2.87e-16!49;UBERON:0003056!5.04e-15!49;UBERON:0002791!5.33e-14!29;UBERON:0003528!5.33e-14!29;UBERON:0001893!5.33e-14!29;UBERON:0003080!1.46e-13!40;UBERON:0002780!1.15e-12!39;UBERON:0001890!1.15e-12!39;UBERON:0006240!1.15e-12!39;UBERON:0002021!1.47e-10!10;UBERON:0000411!1.47e-10!10;UBERON:0001950!1.47e-10!10;UBERON:0002619!2.18e-10!17;UBERON:0000956!8.41e-10!21;UBERON:0001869!8.41e-10!21;UBERON:0000203!8.41e-10!21;UBERON:0007811!5.19e-09!86;UBERON:0003076!2.56e-08!12;UBERON:0003057!2.56e-08!12;UBERON:0000153!1.03e-07!94;UBERON:0002240!1.70e-07!6;UBERON:0005174!1.70e-07!6;UBERON:0001137!1.70e-07!6;UBERON:0000025!2.20e-07!114;UBERON:0002298!2.22e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.29e-30,54;UBERON:0001049,6.65e-30,52;UBERON:0005068,6.65e-30,52;UBERON:0006241,6.65e-30,52;UBERON:0007135,6.65e-30,52;UBERON:0001017,1.64e-28,73;UBERON:0002020,8.75e-28,34;UBERON:0001016,1.44e-27,75;UBERON:0002346,5.21e-25,64;UBERON:0003075,5.21e-25,64;UBERON:0007284,5.21e-25,64;UBERON:0004121,1.97e-23,95;UBERON:0000924,1.97e-23,95;UBERON:0006601,1.97e-23,95;UBERON:0010371,7.13e-23,73;UBERON:0002021,9.34e-23,10;UBERON:0000411,9.34e-23,10;UBERON:0001950,9.34e-23,10;UBERON:0000955,9.30e-21,47;UBERON:0006238,9.30e-21,47;UBERON:0002616,2.90e-19,46;UBERON:0003080,3.75e-18,40;UBERON:0003528,4.23e-18,29;UBERON:0002791,4.23e-18,29;UBERON:0001893,4.23e-18,29;UBERON:0002780,2.00e-16,39;UBERON:0001890,2.00e-16,39;UBERON:0006240,2.00e-16,39;UBERON:0003056,1.31e-15,49;UBERON:0002240,1.53e-15,6;UBERON:0005174,1.53e-15,6;UBERON:0001137,1.53e-15,6;UBERON:0010314,1.95e-15,92;UBERON:0002619,4.21e-15,17;UBERON:0000956,3.67e-14,21;UBERON:0001869,3.67e-14,21;UBERON:0000203,3.67e-14,21;UBERON:0001948,3.19e-13,5;UBERON:0002315,3.19e-13,5;UBERON:0003076,5.57e-13,12;UBERON:0003057,5.57e-13,12;UBERON:0002950,1.30e-10,4;UBERON:0001891,1.30e-10,4;UBERON:0009616,1.30e-10,4;UBERON:0010286,1.30e-10,4;UBERON:0000025,3.16e-10,114;UBERON:0004111,3.78e-09,122;UBERON:0002257,8.57e-09,3;UBERON:0002038,4.43e-08,3;UBERON:0009663,4.43e-08,3;UBERON:0009661,4.43e-08,3;UBERON:0000125,4.43e-08,3;UBERON:0002308,4.43e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,4.57041575046086,5.07997644188711,0.61245399607477,0.0958454710182364,0,0,3.57524546638526,1.22885226604995,0.527545150920775,0.548925861614458,0,3.07101298901519,7.31591393041184,4.12555268997387,7.07108605136802,6.97621235915604,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,12.5824137100051,6.40500843946077,0.376963056338593,4.34560800480691,4.09144731728529,6.85700547046548,4.38051410282946,0,0,0,0.841767423545896,0,0,0,0.30140963567143,0.0680364991513279,0.768682321709099,0.468508622798644,2.32833033665114,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0.617068451549513,0,0,0.233530684734339,0,0.656669856316381,0.405344047729279,0.584799949701329,0.658650345873152,0.536825675041487,2.52347938276953,0.308713837137853,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,6.26147300952389,5.62616095642575,0,0.252470927204373,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,2.80306630000516,0,0,0,0.164140899745061,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.3885110557024,3.22227665555024,6.87474616127276,2.749650917499,6.16574267793578,4.5323633843382,4.05013500139084,5.40385443869065,4.53142408984205,3.62432218226274,0,0,0,0.729320151204882,0.209613162627982,0,0.222246727801615,0.206035057238894,0.962757628775446,0.505394423527595,0.25347929989024,0.565879024158229,0.561849044819294,0.768301828858431,0.402048282689293,0,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.476872379894642,0.581385666529314,0.941093804153306,0.592302255241736,0.365855945745545,0.526139422875686,0.679020569229309,1.12228454331548,0.118635018124174,0.29551344712669,0,0.464810523557898,0.192906610981141,0.999242311751784,0.701794825336225,0,1.14772999241306,0.220591419119515,0.231867835620421|short_description=p1@A330102I10Rik}} | ||
|EntrezGene=77920 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_NR_045077_5end | |||
|description=CAGE_peak_1_at_A330102I10Rik_5end | |||
|id=chr13:29106275..29106280,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.69e-10!23;CL:0000337!6.69e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.57e-11,23;CL:0000337,7.57e-11,23;CL:0002612,8.57e-09,3;CL:0002614,4.43e-08,3;CL:0000540,7.04e-07,33;CL:0000047,7.04e-07,33;CL:0000031,7.04e-07,33;CL:0000404,7.04e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.32e-21!52;UBERON:0005068!8.32e-21!52;UBERON:0006241!8.32e-21!52;UBERON:0007135!8.32e-21!52;UBERON:0001017!8.55e-19!73;UBERON:0005743!8.55e-19!73;UBERON:0002020!9.11e-19!34;UBERON:0000073!1.31e-18!75;UBERON:0001016!1.31e-18!75;UBERON:0000033!2.07e-17!63;UBERON:0000955!4.68e-17!50;UBERON:0006238!4.68e-17!50;UBERON:0002346!6.51e-17!71;UBERON:0003075!6.51e-17!71;UBERON:0007284!6.51e-17!71;UBERON:0004121!8.91e-17!102;UBERON:0000924!8.91e-17!102;UBERON:0006601!8.91e-17!102;UBERON:0002616!2.87e-16!49;UBERON:0003056!5.04e-15!49;UBERON:0002791!5.33e-14!29;UBERON:0003528!5.33e-14!29;UBERON:0001893!5.33e-14!29;UBERON:0003080!1.46e-13!40;UBERON:0002780!1.15e-12!39;UBERON:0001890!1.15e-12!39;UBERON:0006240!1.15e-12!39;UBERON:0002021!1.47e-10!10;UBERON:0000411!1.47e-10!10;UBERON:0001950!1.47e-10!10;UBERON:0002619!2.18e-10!17;UBERON:0000956!8.41e-10!21;UBERON:0001869!8.41e-10!21;UBERON:0000203!8.41e-10!21;UBERON:0007811!5.19e-09!86;UBERON:0003076!2.56e-08!12;UBERON:0003057!2.56e-08!12;UBERON:0000153!1.03e-07!94;UBERON:0002240!1.70e-07!6;UBERON:0005174!1.70e-07!6;UBERON:0001137!1.70e-07!6;UBERON:0000025!2.20e-07!114;UBERON:0002298!2.22e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.29e-30,54;UBERON:0001049,6.65e-30,52;UBERON:0005068,6.65e-30,52;UBERON:0006241,6.65e-30,52;UBERON:0007135,6.65e-30,52;UBERON:0001017,1.64e-28,73;UBERON:0002020,8.75e-28,34;UBERON:0001016,1.44e-27,75;UBERON:0002346,5.21e-25,64;UBERON:0003075,5.21e-25,64;UBERON:0007284,5.21e-25,64;UBERON:0004121,1.97e-23,95;UBERON:0000924,1.97e-23,95;UBERON:0006601,1.97e-23,95;UBERON:0010371,7.13e-23,73;UBERON:0002021,9.34e-23,10;UBERON:0000411,9.34e-23,10;UBERON:0001950,9.34e-23,10;UBERON:0000955,9.30e-21,47;UBERON:0006238,9.30e-21,47;UBERON:0002616,2.90e-19,46;UBERON:0003080,3.75e-18,40;UBERON:0003528,4.23e-18,29;UBERON:0002791,4.23e-18,29;UBERON:0001893,4.23e-18,29;UBERON:0002780,2.00e-16,39;UBERON:0001890,2.00e-16,39;UBERON:0006240,2.00e-16,39;UBERON:0003056,1.31e-15,49;UBERON:0002240,1.53e-15,6;UBERON:0005174,1.53e-15,6;UBERON:0001137,1.53e-15,6;UBERON:0010314,1.95e-15,92;UBERON:0002619,4.21e-15,17;UBERON:0000956,3.67e-14,21;UBERON:0001869,3.67e-14,21;UBERON:0000203,3.67e-14,21;UBERON:0001948,3.19e-13,5;UBERON:0002315,3.19e-13,5;UBERON:0003076,5.57e-13,12;UBERON:0003057,5.57e-13,12;UBERON:0002950,1.30e-10,4;UBERON:0001891,1.30e-10,4;UBERON:0009616,1.30e-10,4;UBERON:0010286,1.30e-10,4;UBERON:0000025,3.16e-10,114;UBERON:0004111,3.78e-09,122;UBERON:0002257,8.57e-09,3;UBERON:0002038,4.43e-08,3;UBERON:0009663,4.43e-08,3;UBERON:0009661,4.43e-08,3;UBERON:0000125,4.43e-08,3;UBERON:0002308,4.43e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,4.57041575046086,5.07997644188711,0.61245399607477,0.0958454710182364,0,0,3.57524546638526,1.22885226604995,0.527545150920775,0.548925861614458,0,3.07101298901519,7.31591393041184,4.12555268997387,7.07108605136802,6.97621235915604,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,12.5824137100051,6.40500843946077,0.376963056338593,4.34560800480691,4.09144731728529,6.85700547046548,4.38051410282946,0,0,0,0.841767423545896,0,0,0,0.30140963567143,0.0680364991513279,0.768682321709099,0.468508622798644,2.32833033665114,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0.617068451549513,0,0,0.233530684734339,0,0.656669856316381,0.405344047729279,0.584799949701329,0.658650345873152,0.536825675041487,2.52347938276953,0.308713837137853,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,6.26147300952389,5.62616095642575,0,0.252470927204373,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,2.80306630000516,0,0,0,0.164140899745061,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.3885110557024,3.22227665555024,6.87474616127276,2.749650917499,6.16574267793578,4.5323633843382,4.05013500139084,5.40385443869065,4.53142408984205,3.62432218226274,0,0,0,0.729320151204882,0.209613162627982,0,0.222246727801615,0.206035057238894,0.962757628775446,0.505394423527595,0.25347929989024,0.565879024158229,0.561849044819294,0.768301828858431,0.402048282689293,0,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.476872379894642,0.581385666529314,0.941093804153306,0.592302255241736,0.365855945745545,0.526139422875686,0.679020569229309,1.12228454331548,0.118635018124174,0.29551344712669,0,0.464810523557898,0.192906610981141,0.999242311751784,0.701794825336225,0,1.14772999241306,0.220591419119515,0.231867835620421 | |||
|short_description=p1@A330102I10Rik | |||
}} |
Revision as of 00:19, 13 September 2013
Short description: | p1@A330102I10Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_A330102I10Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -2bp_to_NR_045077_5end |
EntrezGene: | A330102I10Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.57e-11 | 23 |
neuroblast (sensu Vertebrata) | 7.57e-11 | 23 |
neuron of the ventral spinal cord | 8.57e-09 | 3 |
neuron of the substantia nigra | 4.43e-08 | 3 |
neuron | 7.04e-07 | 33 |
neuronal stem cell | 7.04e-07 | 33 |
neuroblast | 7.04e-07 | 33 |
electrically signaling cell | 7.04e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.